Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 16-370 |
| Cow position: | chr4:66836067-66835702 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 27, 132 |
| Conread position: | 37-362 |
| Cow position: | chr4:42981252-42980917 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 37-370 |
| Cow position: | chr4:14480060-14480392 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 54 |
| Conread position: | 38-296 |
| Cow position: | chr4:38925808-38925557 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 40-387 |
| Cow position: | chr4:61152368-61152021 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 44-367 |
| Cow position: | chr4:54141832-54142153 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 55-297 |
| Cow position: | chr4:63398482-63398719 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 55-386 |
| Cow position: | chr4:43465501-43465826 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 172, 30 |
| Conread position: | 73-297 |
| Cow position: | chr4:63393907-63394122 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 105-370 |
| Cow position: | chr4:3868834-3868567 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 111-297 |
| Cow position: | chr4:42485572-42485395 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 144-297 |
| Cow position: | chr4:12702085-12701935 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 104 |
| Conread position: | 144-326 |
| Cow position: | chr4:57725591-57725772 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 83, 96 |
| Conread position: | 144-329 |
| Cow position: | chr4:14576137-14576322 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-338 |
| Cow position: | chr4:32796589-32796398 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 110 |
| Conread position: | 144-356 |
| Cow position: | chr4:45451544-45451340 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 144-361 |
| Cow position: | chr4:60093878-60094090 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-367 |
| Cow position: | chr4:11169286-11169056 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 72, 105 |
| Conread position: | 144-367 |
| Cow position: | chr4:29905543-29905761 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-370 |
| Cow position: | chr4:10980099-10980320 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 144-370 |
| Cow position: | chr4:13150553-13150322 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 102 |
| Conread position: | 144-370 |
| Cow position: | chr4:44621877-44621646 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 144-370 |
| Cow position: | chr4:48236155-48235927 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 144-371 |
| Cow position: | chr4:58431619-58431851 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-373 |
| Cow position: | chr4:67568159-67567934 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 134, 47 |
| Conread position: | 144-380 |
| Cow position: | chr4:57717058-57717295 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 89, 102 |
| Conread position: | 148-331 |
| Cow position: | chr4:47132640-47132460 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 79, 99 |
| Conread position: | 149-297 |
| Cow position: | chr4:41123184-41123334 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 149-297 |
| Cow position: | chr4:67562546-67562696 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-323 |
| Cow position: | chr4:7160475-7160646 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-356 |
| Cow position: | chr4:64673485-64673690 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-370 |
| Cow position: | chr4:3463990-3463762 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 10, 99 |
| Conread position: | 149-385 |
| Cow position: | chr4:23122443-23122678 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-395 |
| Cow position: | chr4:59531798-59531543 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 78, 97 |
| Conread position: | 150-367 |
| Cow position: | chr4:44086168-44085945 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 77, 97 |
| Conread position: | 150-370 |
| Cow position: | chr4:43420593-43420819 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 97 |
| Conread position: | 151-367 |
| Cow position: | chr4:32024602-32024821 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 59 |
| Conread position: | 151-370 |
| Cow position: | chr4:18006108-18006325 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 152-323 |
| Cow position: | chr4:65944470-65944646 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 65, 98 |
| Conread position: | 156-338 |
| Cow position: | chr4:7983530-7983356 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 156-394 |
| Cow position: | chr4:14424114-14424352 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 159-366 |
| Cow position: | chr4:14528289-14528502 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 60, 89 |
| Conread position: | 159-394 |
| Cow position: | chr4:5228714-5228954 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 63, 94 |
| Conread position: | 159-394 |
| Cow position: | chr4:12226862-12226623 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 175-366 |
| Cow position: | chr4:12652079-12652276 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 180-370 |
| Cow position: | chr4:28224014-28223819 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 69 |
Show alignments to all cow chromosomes.