Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 37-370 |
| Cow position: | chr6:49801602-49801260 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 37, 106 |
| Conread position: | 40-366 |
| Cow position: | chr6:62994242-62993915 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 40-370 |
| Cow position: | chr6:37884885-37884550 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 40-395 |
| Cow position: | chr6:16604730-16604372 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 41-367 |
| Cow position: | chr6:62859987-62860310 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 66-370 |
| Cow position: | chr6:47226246-47225937 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 73-370 |
| Cow position: | chr6:44496033-44496327 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 105-370 |
| Cow position: | chr6:38939855-38939591 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 122, 17 |
| Conread position: | 127-395 |
| Cow position: | chr6:60794852-60795125 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 144-316 |
| Cow position: | chr6:61844907-61844739 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 144-323 |
| Cow position: | chr6:54337882-54338063 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 104 |
| Conread position: | 144-349 |
| Cow position: | chr6:28433759-28433960 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-349 |
| Cow position: | chr6:53233627-53233832 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-356 |
| Cow position: | chr6:1632453-1632245 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 83, 49 |
| Conread position: | 144-357 |
| Cow position: | chr6:61542583-61542793 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-358 |
| Cow position: | chr6:47228742-47228961 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 107 |
| Conread position: | 144-361 |
| Cow position: | chr6:50481865-50481649 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 144-366 |
| Cow position: | chr6:26451191-26451416 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 32 |
| Conread position: | 144-366 |
| Cow position: | chr6:67782304-67782076 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 84, 49 |
| Conread position: | 144-367 |
| Cow position: | chr6:48151455-48151675 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 58, 105 |
| Conread position: | 144-370 |
| Cow position: | chr6:37390207-37390431 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-370 |
| Cow position: | chr6:50743235-50743009 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 149-297 |
| Cow position: | chr6:59297801-59297949 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-354 |
| Cow position: | chr6:50265870-50266081 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-367 |
| Cow position: | chr6:24803680-24803903 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-370 |
| Cow position: | chr6:61436151-61436370 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 67, 96 |
| Conread position: | 150-313 |
| Cow position: | chr6:44231100-44231270 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 97 |
| Conread position: | 150-385 |
| Cow position: | chr6:14883323-14883556 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 88, 108 |
| Conread position: | 152-348 |
| Cow position: | chr6:27413289-27413477 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 156-366 |
| Cow position: | chr6:15068734-15068943 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 71, 91 |
| Conread position: | 167-366 |
| Cow position: | chr6:7496895-7497090 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 54, 79 |
| Conread position: | 186-370 |
| Cow position: | chr6:42804203-42804014 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 229-353 |
| Cow position: | chr6:5984336-5984463 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 20 |
Show alignments to all cow chromosomes.