Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 25-215 |
| Cow position: | chr7:43182525-43182329 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 127 |
| Conread position: | 25-370 |
| Cow position: | chr7:161725-161368 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 37-370 |
| Cow position: | chr7:33597184-33596836 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 118 |
| Conread position: | 38-370 |
| Cow position: | chr7:38469771-38470111 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 31, 68 |
| Conread position: | 39-357 |
| Cow position: | chr7:40909886-40909555 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 46-367 |
| Cow position: | chr7:38470271-38470600 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 63-297 |
| Cow position: | chr7:11157639-11157880 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 189 |
| Conread position: | 128-349 |
| Cow position: | chr7:55975151-55974937 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 129-395 |
| Cow position: | chr7:30544815-30544543 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 98, 11 |
| Conread position: | 142-323 |
| Cow position: | chr7:19929953-19930138 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 107 |
| Conread position: | 144-274 |
| Cow position: | chr7:25804723-25804854 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 144-354 |
| Cow position: | chr7:47886660-47886439 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 74, 31 |
| Conread position: | 144-358 |
| Cow position: | chr7:3916366-3916588 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 105 |
| Conread position: | 144-370 |
| Cow position: | chr7:31108321-31108098 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 144-370 |
| Cow position: | chr7:38811107-38810874 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-370 |
| Cow position: | chr7:50718408-50718642 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-385 |
| Cow position: | chr7:57380438-57380189 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 148-349 |
| Cow position: | chr7:62014949-62014752 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 79, 97 |
| Conread position: | 149-317 |
| Cow position: | chr7:40900138-40899964 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 101 |
| Conread position: | 149-345 |
| Cow position: | chr7:49058748-49058555 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 153 |
| Conread position: | 149-370 |
| Cow position: | chr7:25828711-25828936 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-385 |
| Cow position: | chr7:5015015-5015250 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 150-370 |
| Cow position: | chr7:2753053-2753276 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 77, 97 |
| Conread position: | 150-370 |
| Cow position: | chr7:12266092-12266324 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 151-380 |
| Cow position: | chr7:66164726-66164498 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 95 |
| Conread position: | 158-386 |
| Cow position: | chr7:23349977-23349754 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 207, 142 |
| Conread position: | 159-363 |
| Cow position: | chr7:3662206-3661996 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 89 |
| Conread position: | 159-366 |
| Cow position: | chr7:18107893-18107685 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 167-385 |
| Cow position: | chr7:51756126-51755897 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 175-363 |
| Cow position: | chr7:13801071-13800876 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 184-367 |
| Cow position: | chr7:50754767-50754577 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 200-366 |
| Cow position: | chr7:21834458-21834292 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 52 |
Show alignments to all cow chromosomes.