Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 12-363 |
| Cow position: | chr9:40441100-40440743 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 26, 82 |
| Conread position: | 27-370 |
| Cow position: | chr9:16619308-16618966 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 27-416 |
| Cow position: | chr9:27385517-27385925 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 287 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 36-297 |
| Cow position: | chr9:23133697-23133438 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 37-358 |
| Cow position: | chr9:6260168-6260500 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 109 |
| Conread position: | 37-370 |
| Cow position: | chr9:1387620-1387958 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 37-370 |
| Cow position: | chr9:16863950-16863613 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 40-323 |
| Cow position: | chr9:5479295-5479586 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 73-280 |
| Cow position: | chr9:48193573-48193779 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 73-329 |
| Cow position: | chr9:5380847-5381104 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 77-272 |
| Cow position: | chr9:8082954-8083147 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 97-372 |
| Cow position: | chr9:1631265-1630994 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 121-356 |
| Cow position: | chr9:5701651-5701412 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 126-367 |
| Cow position: | chr9:34047680-34047929 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 142-363 |
| Cow position: | chr9:37289686-37289919 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 144-297 |
| Cow position: | chr9:61574337-61574490 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 100 |
| Conread position: | 144-349 |
| Cow position: | chr9:4968511-4968310 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-361 |
| Cow position: | chr9:20605548-20605340 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-366 |
| Cow position: | chr9:25032184-25031965 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-366 |
| Cow position: | chr9:41026852-41027083 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 83, 102 |
| Conread position: | 144-367 |
| Cow position: | chr9:58569578-58569352 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-370 |
| Cow position: | chr9:8627442-8627210 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 84, 103 |
| Conread position: | 146-367 |
| Cow position: | chr9:42252565-42252796 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 43, 103 |
| Conread position: | 147-370 |
| Cow position: | chr9:3436164-3435940 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 149-364 |
| Cow position: | chr9:40082238-40082457 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 64, 110 |
| Conread position: | 149-370 |
| Cow position: | chr9:25541411-25541630 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 78, 97 |
| Conread position: | 149-386 |
| Cow position: | chr9:8596426-8596662 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 79, 103 |
| Conread position: | 149-395 |
| Cow position: | chr9:1383513-1383262 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 154-382 |
| Cow position: | chr9:49420885-49421115 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 60, 94 |
| Conread position: | 156-395 |
| Cow position: | chr9:1097501-1097739 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 91 |
| Conread position: | 158-370 |
| Cow position: | chr9:7615836-7616055 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 69, 89 |
| Conread position: | 159-349 |
| Cow position: | chr9:22441175-22440985 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 68, 88 |
| Conread position: | 159-366 |
| Cow position: | chr9:28536306-28536095 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 165-363 |
| Cow position: | chr9:15993197-15993404 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 67, 85 |
| Conread position: | 167-366 |
| Cow position: | chr9:33569600-33569390 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 87 |
| Conread position: | 181-363 |
| Cow position: | chr9:7008845-7009035 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 182-366 |
| Cow position: | chr9:7448264-7448070 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 67 |
Show alignments to all cow chromosomes.