Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 25-380 |
| Cow position: | chrX:36090303-36090671 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 37-349 |
| Cow position: | chrX:48016201-48015881 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 38-366 |
| Cow position: | chrX:28641524-28641848 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 117 |
| Conread position: | 41-366 |
| Cow position: | chrX:48265256-48264936 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 8 |
| Conread position: | 105-358 |
| Cow position: | chrX:45769760-45769503 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 115, 42 |
| Conread position: | 121-370 |
| Cow position: | chrX:47336336-47336084 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 142-338 |
| Cow position: | chrX:15267328-15267123 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 73, 113 |
| Conread position: | 142-367 |
| Cow position: | chrX:39528437-39528664 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 143-358 |
| Cow position: | chrX:34827265-34827482 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 106 |
| Conread position: | 144-349 |
| Cow position: | chrX:5414486-5414691 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 102 |
| Conread position: | 144-358 |
| Cow position: | chrX:19503370-19503588 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 144-362 |
| Cow position: | chrX:32978922-32978696 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-366 |
| Cow position: | chrX:42496859-42497077 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-367 |
| Cow position: | chrX:25306754-25306527 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 104 |
| Conread position: | 144-367 |
| Cow position: | chrX:37075031-37074809 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 155, 100 |
| Conread position: | 144-370 |
| Cow position: | chrX:28036831-28037050 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 149-294 |
| Cow position: | chrX:6393162-6393019 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 149-323 |
| Cow position: | chrX:42416879-42417050 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-370 |
| Cow position: | chrX:39861020-39861241 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 79, 51 |
| Conread position: | 149-370 |
| Cow position: | chrX:45892982-45893208 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-385 |
| Cow position: | chrX:26381559-26381328 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 151-385 |
| Cow position: | chrX:24394493-24394723 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 156-361 |
| Cow position: | chrX:31203908-31204111 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 71, 91 |
| Conread position: | 156-370 |
| Cow position: | chrX:26463640-26463861 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 159-366 |
| Cow position: | chrX:12649104-12649318 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 89 |
| Conread position: | 159-367 |
| Cow position: | chrX:42570665-42570459 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 74 |
| Conread position: | 160-366 |
| Cow position: | chrX:29919852-29919637 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 72, 87 |
| Conread position: | 167-352 |
| Cow position: | chrX:42467441-42467250 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 178-366 |
| Cow position: | chrX:40598598-40598797 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 71 |
| Conread position: | 178-394 |
| Cow position: | chrX:30035993-30035764 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 182-362 |
| Cow position: | chrX:26411689-26411879 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 35, 67 |
| Conread position: | 182-366 |
| Cow position: | chrX:9515117-9514922 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 67 |
Show alignments to all cow chromosomes.