Non-Coding RNA Search

Cow genome map


           Conread name:
           rnmm07c_i8.y1
        

               Conread position:
               79-585
               

               Cow position:
               chr10:38014695-38014194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               392, 267
               

               Conread position:
               153-583
               

               Cow position:
               chr10:56392020-56392444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               297, 0
               

               Conread position:
               175-585
               

               Cow position:
               chr10:59572137-59571730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               189-440
               

               Cow position:
               chr10:27178717-27178467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               40, 22
               

               Conread position:
               204-580
               

               Cow position:
               chr10:13586922-13586547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               208-580
               

               Cow position:
               chr10:6852465-6852105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 35
               

               Conread position:
               211-585
               

               Cow position:
               chr10:60388571-60388932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               215-464
               

               Cow position:
               chr10:23310824-23311080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 173
               

               Conread position:
               217-432
               

               Cow position:
               chr10:40999060-40998835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               217-577
               

               Cow position:
               chr10:16414369-16414749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 150
               

               Conread position:
               217-577
               

               Cow position:
               chr10:57461561-57461191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               28, 174
               

               Conread position:
               217-585
               

               Cow position:
               chr10:67442915-67443277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               7, 128
               

               Conread position:
               219-583
               

               Cow position:
               chr10:56475650-56475296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               193, 15
               

               Conread position:
               219-585
               

               Cow position:
               chr10:34661127-34661485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               222-585
               

               Cow position:
               chr10:37529073-37529437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 161
               

               Conread position:
               224-432
               

               Cow position:
               chr10:24971133-24971347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               42, 111
               

               Conread position:
               226-506
               

               Cow position:
               chr10:23346111-23346396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               41, 152
               

               Conread position:
               226-569
               

               Cow position:
               chr10:66199510-66199865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               248
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               46, 217
               

               Conread position:
               226-583
               

               Cow position:
               chr10:4109773-4109420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               41, 17
               

               Conread position:
               227-473
               

               Cow position:
               chr10:17150067-17149819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               40, 156
               

               Conread position:
               227-577
               

               Cow position:
               chr10:53179457-53179133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 45
               

               Conread position:
               227-580
               

               Cow position:
               chr10:33890903-33891256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               227-585
               

               Cow position:
               chr10:31027447-31027817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               228-581
               

               Cow position:
               chr10:33215986-33215633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               39, 113
               

               Conread position:
               229-576
               

               Cow position:
               chr10:51944551-51944196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 158
               

               Conread position:
               231-435
               

               Cow position:
               chr10:37400600-37400398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               231-582
               

               Cow position:
               chr10:50558741-50559096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               233-472
               

               Cow position:
               chr10:6242333-6242569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               233-582
               

               Cow position:
               chr10:60236913-60237262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               233-585
               

               Cow position:
               chr10:23055904-23056250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 39
               

               Conread position:
               234-581
               

               Cow position:
               chr10:8404394-8404047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               33, 102
               

               Conread position:
               234-585
               

               Cow position:
               chr10:31362031-31362379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 151
               

               Conread position:
               234-585
               

               Cow position:
               chr10:37415971-37415617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 151
               

               Conread position:
               235-582
               

               Cow position:
               chr10:12315312-12314988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               101, 43
               

               Conread position:
               236-501
               

               Cow position:
               chr10:23390132-23390404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               236-525
               

               Cow position:
               chr10:55395792-55396088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 158
               

               Conread position:
               236-585
               

               Cow position:
               chr10:21657592-21657252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               237-581
               

               Cow position:
               chr10:34654926-34655280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 156
               

               Conread position:
               239-580
               

               Cow position:
               chr10:38376492-38376818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               239-583
               

               Cow position:
               chr10:2201952-2202294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               99, 53
               

               Conread position:
               241-581
               

               Cow position:
               chr10:54947963-54948304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               243-459
               

               Cow position:
               chr10:39622187-39622401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               243-459
               

               Cow position:
               chr10:45623610-45623832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 135
               

               Conread position:
               243-508
               

               Cow position:
               chr10:10138039-10137773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               24, 139
               

               Conread position:
               243-510
               

               Cow position:
               chr10:24448038-24447766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 29
               

               Conread position:
               243-523
               

               Cow position:
               chr10:61509768-61510050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               24, 143
               

               Conread position:
               243-580
               

               Cow position:
               chr10:9575870-9576204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               24, 147
               

               Conread position:
               243-582
               

               Cow position:
               chr10:3999069-3998735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               24, 57
               

               Conread position:
               243-582
               

               Cow position:
               chr10:35862053-35862395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               27, 143
               

               Conread position:
               244-471
               

               Cow position:
               chr10:32080445-32080217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 141
               

               Conread position:
               244-583
               

               Cow position:
               chr10:12486422-12486094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               235, 28
               

               Conread position:
               246-585
               

               Cow position:
               chr10:28176226-28176561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 92
               

               Conread position:
               251-583
               

               Cow position:
               chr10:54477248-54476937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               282-583
               

               Cow position:
               chr10:2704321-2704040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               223, 11
               

               Conread position:
               283-458
               

               Cow position:
               chr10:704872-705042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               285-585
               

               Cow position:
               chr10:7366661-7366957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               290-582
               

               Cow position:
               chr10:45770162-45769874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 69
               

               Conread position:
               292-425
               

               Cow position:
               chr10:2000857-2000993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               292-517
               

               Cow position:
               chr10:41760205-41760426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               292-571
               

               Cow position:
               chr10:65345357-65345626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               126, 81
               

               Conread position:
               292-581
               

               Cow position:
               chr10:52113557-52113837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               44, 55
               

               Conread position:
               292-582
               

               Cow position:
               chr10:24763599-24763309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 85
               

               Conread position:
               292-582
               

               Cow position:
               chr10:26209131-26209427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               181, 85
               

               Conread position:
               293-464
               

               Cow position:
               chr10:2185462-2185297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               293-571
               

               Cow position:
               chr10:29919723-29919991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               293-579
               

               Cow position:
               chr10:11248097-11247811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               293-582
               

               Cow position:
               chr10:31373973-31374263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               293-582
               

               Cow position:
               chr10:57059166-57059450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               293-583
               

               Cow position:
               chr10:24732420-24732144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               294-541
               

               Cow position:
               chr10:59843793-59844041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 84
               

               Conread position:
               295-540
               

               Cow position:
               chr10:49947768-49948005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               236, 30
               

               Conread position:
               295-546
               

               Cow position:
               chr10:4151652-4151414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               295-582
               

               Cow position:
               chr10:5151460-5151182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               31, 83
               

               Conread position:
               295-582
               

               Cow position:
               chr10:24560881-24561153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               181, 23
               

               Conread position:
               295-582
               

               Cow position:
               chr10:37235433-37235718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               295-585
               

               Cow position:
               chr10:6489986-6489698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 87
               

               Conread position:
               295-585
               

               Cow position:
               chr10:6720014-6719730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               23, 92
               

               Conread position:
               295-585
               

               Cow position:
               chr10:24871279-24870993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 83
               

               Conread position:
               296-582
               

               Cow position:
               chr10:61839695-61839428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               298-477
               

               Cow position:
               chr10:68208362-68208182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 170
               

               Conread position:
               298-579
               

               Cow position:
               chr10:53973952-53973682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               298-585
               

               Cow position:
               chr10:11966738-11967013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               165, 37
               

               Conread position:
               299-501
               

               Cow position:
               chr10:58044019-58044218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               108, 77
               

               Conread position:
               299-520
               

               Cow position:
               chr10:33084330-33084543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               299-545
               

               Cow position:
               chr10:10750138-10750384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               18, 77
               

               Conread position:
               299-577
               

               Cow position:
               chr10:28776460-28776187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               299-580
               

               Cow position:
               chr10:64042192-64041919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               299-585
               

               Cow position:
               chr10:52296604-52296329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               97, 78
               

               Conread position:
               301-580
               

               Cow position:
               chr10:59151756-59152032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               302-459
               

               Cow position:
               chr10:2695069-2694917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               302-552
               

               Cow position:
               chr10:15309296-15309535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               87, 75
               

               Conread position:
               302-581
               

               Cow position:
               chr10:10469074-10468813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               261, 41
               

               Conread position:
               302-582
               

               Cow position:
               chr10:51696847-51696574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 75
               

               Conread position:
               302-585
               

               Cow position:
               chr10:54504708-54504434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 29
               

               Conread position:
               303-459
               

               Cow position:
               chr10:60697523-60697671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               303-505
               

               Cow position:
               chr10:53405578-53405384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               177, 74
               

               Conread position:
               303-512
               

               Cow position:
               chr10:23583465-23583668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               165, 76
               

               Conread position:
               303-541
               

               Cow position:
               chr10:32973099-32973333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               303-564
               

               Cow position:
               chr10:61922037-61922289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               303-568
               

               Cow position:
               chr10:24022178-24022432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               303-573
               

               Cow position:
               chr10:19191859-19191617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               303-573
               

               Cow position:
               chr10:40163828-40164093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 70
               

               Conread position:
               303-576
               

               Cow position:
               chr10:49146616-49146358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               303-577
               

               Cow position:
               chr10:52695619-52695892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               303-580
               

               Cow position:
               chr10:54848883-54848610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               173, 74
               

               Conread position:
               303-582
               

               Cow position:
               chr10:13765058-13765333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               303-582
               

               Cow position:
               chr10:20095873-20095589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               303-582
               

               Cow position:
               chr10:21422056-21422317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               177, 45
               

               Conread position:
               303-582
               

               Cow position:
               chr10:22390702-22390420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 75
               

               Conread position:
               303-582
               

               Cow position:
               chr10:50609659-50609373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 219
               

               Conread position:
               303-582
               

               Cow position:
               chr10:60961040-60960771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               249, 70
               

               Conread position:
               303-582
               

               Cow position:
               chr10:63276499-63276221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               303-585
               

               Cow position:
               chr10:24756517-24756245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               303-585
               

               Cow position:
               chr10:35245845-35246111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               304-433
               

               Cow position:
               chr10:10829146-10829021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               304-574
               

               Cow position:
               chr10:17022461-17022724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 73
               

               Conread position:
               304-585
               

               Cow position:
               chr10:47773832-47773558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               305-519
               

               Cow position:
               chr10:37426030-37426241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               305-521
               

               Cow position:
               chr10:59462239-59462025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               305-555
               

               Cow position:
               chr10:58451272-58451513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               305-577
               

               Cow position:
               chr10:15115718-15115452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               83, 69
               

               Conread position:
               305-581
               

               Cow position:
               chr10:47725047-47724780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               245, 35
               

               Conread position:
               305-582
               

               Cow position:
               chr10:45378901-45379173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               246, 72
               

               Conread position:
               305-582
               

               Cow position:
               chr10:48462240-48462507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               242, 72
               

               Conread position:
               305-584
               

               Cow position:
               chr10:24276622-24276903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               72, 159
               

               Conread position:
               305-585
               

               Cow position:
               chr10:10120297-10120027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 72
               

               Conread position:
               305-585
               

               Cow position:
               chr10:30352956-30352676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               51, 75
               

               Conread position:
               305-585
               

               Cow position:
               chr10:39228251-39227974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               305-585
               

               Cow position:
               chr10:48257172-48257448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               305-585
               

               Cow position:
               chr10:50533765-50534045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               166, 72
               

               Conread position:
               306-581
               

               Cow position:
               chr10:31779166-31779437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               171, 71
               

               Conread position:
               306-582
               

               Cow position:
               chr10:4164372-4164099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               173, 71
               

               Conread position:
               306-582
               

               Cow position:
               chr10:55122909-55122625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               168, 71
               

               Conread position:
               306-585
               

               Cow position:
               chr10:28841060-28840785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               165, 70
               

               Conread position:
               306-585
               

               Cow position:
               chr10:33067474-33067736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               307-494
               

               Cow position:
               chr10:43586179-43586368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               307-496
               

               Cow position:
               chr10:41676309-41676495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               108, 52
               

               Conread position:
               307-555
               

               Cow position:
               chr10:27118861-27119108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               307-573
               

               Cow position:
               chr10:1488934-1488680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 71
               

               Conread position:
               307-581
               

               Cow position:
               chr10:39387554-39387292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               212, 28
               

               Conread position:
               307-581
               

               Cow position:
               chr10:45658246-45657977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               251, 70
               

               Conread position:
               307-582
               

               Cow position:
               chr10:9675362-9675626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               307-582
               

               Cow position:
               chr10:19549387-19549657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               247, 20
               

               Conread position:
               307-582
               

               Cow position:
               chr10:56828214-56828486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               307-585
               

               Cow position:
               chr10:28395200-28395471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 70
               

               Conread position:
               308-506
               

               Cow position:
               chr10:34646346-34646541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               162, 69
               

               Conread position:
               308-515
               

               Cow position:
               chr10:54819366-54819164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               163, 68
               

               Conread position:
               308-585
               

               Cow position:
               chr10:27828422-27828159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               308-585
               

               Cow position:
               chr10:41941466-41941748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               309-458
               

               Cow position:
               chr10:49253461-49253320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               309-568
               

               Cow position:
               chr10:42451157-42451392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 68
               

               Conread position:
               309-579
               

               Cow position:
               chr10:6665460-6665707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               309-581
               

               Cow position:
               chr10:53336304-53336574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               48, 70
               

               Conread position:
               309-581
               

               Cow position:
               chr10:57142116-57142379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               309-582
               

               Cow position:
               chr10:63940877-63940605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               78, 69
               

               Conread position:
               309-585
               

               Cow position:
               chr10:8093219-8093485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               309-585
               

               Cow position:
               chr10:11213212-11212944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 69
               

               Conread position:
               309-585
               

               Cow position:
               chr10:31400800-31401066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               310-507
               

               Cow position:
               chr10:973232-973046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               161, 66
               

               Conread position:
               310-512
               

               Cow position:
               chr10:15425148-15424955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               310-561
               

               Cow position:
               chr10:49455995-49456234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 36
               

               Conread position:
               310-582
               

               Cow position:
               chr10:15462601-15462321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               311-458
               

               Cow position:
               chr10:49923276-49923420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               311-576
               

               Cow position:
               chr10:6530284-6530034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               311-582
               

               Cow position:
               chr10:1978574-1978828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               311-585
               

               Cow position:
               chr10:77467-77218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               311-585
               

               Cow position:
               chr10:5599906-5600166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 65
               

               Conread position:
               311-585
               

               Cow position:
               chr10:37818460-37818728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 19
               

               Conread position:
               312-582
               

               Cow position:
               chr10:45371152-45370886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 72
               

               Conread position:
               313-580
               

               Cow position:
               chr10:52046965-52046694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               110, 6
               

               Conread position:
               314-579
               

               Cow position:
               chr10:30613921-30613673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               314-581
               

               Cow position:
               chr10:51861984-51862241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               314-583
               

               Cow position:
               chr10:30522969-30523236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 17
               

               Conread position:
               314-585
               

               Cow position:
               chr10:28038839-28039108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 33
               

               Conread position:
               315-449
               

               Cow position:
               chr10:2857140-2857010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               315-458
               

               Cow position:
               chr10:49634160-49634020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               315-459
               

               Cow position:
               chr10:10634312-10634171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               315-459
               

               Cow position:
               chr10:38995326-38995181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               315-459
               

               Cow position:
               chr10:46886244-46886109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               315-481
               

               Cow position:
               chr10:55600064-55600226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               315-485
               

               Cow position:
               chr10:24902891-24903060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               159, 62
               

               Conread position:
               315-501
               

               Cow position:
               chr10:24929833-24929652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               146, 46
               

               Conread position:
               315-501
               

               Cow position:
               chr10:52827504-52827677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               315-521
               

               Cow position:
               chr10:48407230-48407030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               315-524
               

               Cow position:
               chr10:22888721-22888926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               163, 59
               

               Conread position:
               315-526
               

               Cow position:
               chr10:56180657-56180452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 60
               

               Conread position:
               315-530
               

               Cow position:
               chr10:6199116-6198901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               315-545
               

               Cow position:
               chr10:8449598-8449367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 66
               

               Conread position:
               315-545
               

               Cow position:
               chr10:9578865-9579097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 61
               

               Conread position:
               315-545
               

               Cow position:
               chr10:13316032-13315810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               144, 61
               

               Conread position:
               315-546
               

               Cow position:
               chr10:39124227-39123997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               315-546
               

               Cow position:
               chr10:46327784-46327556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               315-554
               

               Cow position:
               chr10:6664127-6663886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               152, 62
               

               Conread position:
               315-555
               

               Cow position:
               chr10:53076207-53075980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               315-557
               

               Cow position:
               chr10:30360612-30360376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               315-564
               

               Cow position:
               chr10:22633532-22633775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               188, 62
               

               Conread position:
               315-570
               

               Cow position:
               chr10:14947347-14947105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               315-570
               

               Cow position:
               chr10:30369729-30369967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               143, 60
               

               Conread position:
               315-572
               

               Cow position:
               chr10:16986425-16986171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               36, 42
               

               Conread position:
               315-573
               

               Cow position:
               chr10:6543818-6543563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 10
               

               Conread position:
               315-576
               

               Cow position:
               chr10:10148742-10148492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               315-576
               

               Cow position:
               chr10:23506398-23506649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               165, 61
               

               Conread position:
               315-577
               

               Cow position:
               chr10:8934564-8934320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               315-577
               

               Cow position:
               chr10:53674919-53674661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               315-580
               

               Cow position:
               chr10:2538183-2537928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               233, 16
               

               Conread position:
               315-580
               

               Cow position:
               chr10:2849442-2849188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               242, 60
               

               Conread position:
               315-580
               

               Cow position:
               chr10:20553278-20553016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               84, 62
               

               Conread position:
               315-580
               

               Cow position:
               chr10:41254484-41254738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               161, 24
               

               Conread position:
               315-580
               

               Cow position:
               chr10:42312997-42312740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               86, 63
               

               Conread position:
               315-581
               

               Cow position:
               chr10:35778808-35779069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               315-582
               

               Cow position:
               chr10:1996578-1996830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               176, 10
               

               Conread position:
               315-582
               

               Cow position:
               chr10:2449439-2449184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               144, 21
               

               Conread position:
               315-582
               

               Cow position:
               chr10:4184289-4184023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               151, 59
               

               Conread position:
               315-582
               

               Cow position:
               chr10:6436153-6435890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               237, 62
               

               Conread position:
               315-582
               

               Cow position:
               chr10:7817201-7816939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               315-582
               

               Cow position:
               chr10:15868345-15868068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               211, 62
               

               Conread position:
               315-582
               

               Cow position:
               chr10:15871779-15872040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               111, 62
               

               Conread position:
               315-582
               

               Cow position:
               chr10:16598781-16598518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               315-582
               

               Cow position:
               chr10:17176126-17175866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               315-582
               

               Cow position:
               chr10:19895486-19895230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               162, 15
               

               Conread position:
               315-582
               

               Cow position:
               chr10:21462334-21462069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               148, 25
               

               Conread position:
               315-582
               

               Cow position:
               chr10:24132730-24132986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               315-582
               

               Cow position:
               chr10:42746008-42745747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               169, 16
               

               Conread position:
               315-582
               

               Cow position:
               chr10:50182958-50183217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               315-582
               

               Cow position:
               chr10:51942882-51942622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               85, 62
               

               Conread position:
               315-582
               

               Cow position:
               chr10:55733514-55733768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               315-582
               

               Cow position:
               chr10:59164014-59164263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               315-582
               

               Cow position:
               chr10:62219927-62219655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               315-582
               

               Cow position:
               chr10:67288384-67288127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               166, 62
               

               Conread position:
               315-583
               

               Cow position:
               chr10:9656429-9656710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               315-583
               

               Cow position:
               chr10:31534830-31534575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               315-584
               

               Cow position:
               chr10:6532065-6532322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               133, 62
               

               Conread position:
               315-584
               

               Cow position:
               chr10:62353553-62353293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               315-585
               

               Cow position:
               chr10:10720581-10720844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               315-585
               

               Cow position:
               chr10:11081058-11080790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 64
               

               Conread position:
               315-585
               

               Cow position:
               chr10:20132435-20132700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               242, 66
               

               Conread position:
               315-585
               

               Cow position:
               chr10:21082474-21082213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               163, 62
               

               Conread position:
               315-585
               

               Cow position:
               chr10:24375637-24375381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               315-585
               

               Cow position:
               chr10:34174884-34175165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               141, 62
               

               Conread position:
               315-585
               

               Cow position:
               chr10:35802267-35802540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               90, 66
               

               Conread position:
               315-585
               

               Cow position:
               chr10:37295579-37295834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               315-585
               

               Cow position:
               chr10:37913092-37913356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               315-585
               

               Cow position:
               chr10:40107193-40106935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               124, 41
               

               Conread position:
               315-585
               

               Cow position:
               chr10:48316854-48317128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               154, 63
               

               Conread position:
               315-585
               

               Cow position:
               chr10:52278818-52278559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               315-585
               

               Cow position:
               chr10:55621761-55622017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               316-455
               

               Cow position:
               chr10:5739186-5739320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               316-500
               

               Cow position:
               chr10:37768395-37768215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               145, 21
               

               Conread position:
               316-544
               

               Cow position:
               chr10:12100451-12100679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 61
               

               Conread position:
               316-561
               

               Cow position:
               chr10:33116859-33117098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               212, 61
               

               Conread position:
               316-565
               

               Cow position:
               chr10:11009502-11009265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               316-567
               

               Cow position:
               chr10:48087979-48087734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 19
               

               Conread position:
               316-569
               

               Cow position:
               chr10:40147541-40147792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               316-580
               

               Cow position:
               chr10:16645097-16645357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               162, 46
               

               Conread position:
               316-581
               

               Cow position:
               chr10:57786431-57786172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 59
               

               Conread position:
               316-582
               

               Cow position:
               chr10:17844859-17844595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               27, 31
               

               Conread position:
               316-582
               

               Cow position:
               chr10:22341669-22341400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               316-582
               

               Cow position:
               chr10:53247912-53248180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               143, 30
               

               Conread position:
               316-583
               

               Cow position:
               chr10:19372244-19372507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               166, 61
               

               Conread position:
               316-583
               

               Cow position:
               chr10:59663880-59664145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               100, 25
               

               Conread position:
               316-584
               

               Cow position:
               chr10:10043014-10043262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               316-585
               

               Cow position:
               chr10:2613460-2613195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               316-585
               

               Cow position:
               chr10:20897382-20897135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               316-585
               

               Cow position:
               chr10:28104987-28105254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               161, 61
               

               Conread position:
               316-585
               

               Cow position:
               chr10:29252256-29251994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               316-585
               

               Cow position:
               chr10:48741067-48741331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               238, 61
               

               Conread position:
               317-527
               

               Cow position:
               chr10:44421814-44422016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               317-552
               

               Cow position:
               chr10:3364091-3364316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               108, 59
               

               Conread position:
               317-570
               

               Cow position:
               chr10:44783438-44783188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               317-581
               

               Cow position:
               chr10:38370364-38370626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               121, 29
               

               Conread position:
               317-582
               

               Cow position:
               chr10:9083393-9083129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               317-582
               

               Cow position:
               chr10:15817703-15817961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 56
               

               Conread position:
               317-582
               

               Cow position:
               chr10:22616549-22616807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               317-582
               

               Cow position:
               chr10:23576637-23576374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               157, 56
               

               Conread position:
               317-582
               

               Cow position:
               chr10:29588750-29589009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               199, 25
               

               Conread position:
               317-582
               

               Cow position:
               chr10:31791168-31791427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               230, 61
               

               Conread position:
               317-582
               

               Cow position:
               chr10:66194213-66194473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               317-583
               

               Cow position:
               chr10:36490111-36489846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               124, 55
               

               Conread position:
               317-585
               

               Cow position:
               chr10:10135079-10134813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               43, 61
               

               Conread position:
               317-585
               

               Cow position:
               chr10:37014725-37014464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               317-585
               

               Cow position:
               chr10:37668065-37668329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               317-585
               

               Cow position:
               chr10:61588169-61588434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               98, 59
               

               Conread position:
               318-534
               

               Cow position:
               chr10:29379868-29380082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               162, 60
               

               Conread position:
               319-570
               

               Cow position:
               chr10:6384620-6384379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               319-573
               

               Cow position:
               chr10:47651388-47651149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               160, 55
               

               Conread position:
               319-582
               

               Cow position:
               chr10:721390-721133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               163, 58
               

               Conread position:
               319-582
               

               Cow position:
               chr10:36002288-36002030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               319-582
               

               Cow position:
               chr10:59675164-59675419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 59
               

               Conread position:
               319-583
               

               Cow position:
               chr10:29166362-29166112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               159, 57
               

               Conread position:
               319-583
               

               Cow position:
               chr10:29279535-29279272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               123, 58
               

               Conread position:
               319-583
               

               Cow position:
               chr10:64285705-64285962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               319-585
               

               Cow position:
               chr10:17863675-17863416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               157, 58
               

               Conread position:
               319-585
               

               Cow position:
               chr10:23096687-23096950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               148, 230
               

               Conread position:
               319-585
               

               Cow position:
               chr10:33665932-33665666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 58
               

               Conread position:
               319-585
               

               Cow position:
               chr10:35792015-35791761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               319-585
               

               Cow position:
               chr10:35901402-35901158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               320-493
               

               Cow position:
               chr10:35867931-35868097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               320-544
               

               Cow position:
               chr10:52881530-52881750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               320-581
               

               Cow position:
               chr10:50044555-50044817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               320-582
               

               Cow position:
               chr10:5543162-5543414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               237, 57
               

               Conread position:
               320-582
               

               Cow position:
               chr10:50134716-50134975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               116, 10
               

               Conread position:
               320-583
               

               Cow position:
               chr10:24745208-24744961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               161, 57
               

               Conread position:
               320-585
               

               Cow position:
               chr10:35731439-35731694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               321-459
               

               Cow position:
               chr10:49060630-49060764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               321-581
               

               Cow position:
               chr10:17073277-17073526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               321-585
               

               Cow position:
               chr10:22396340-22396080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               137, 52
               

               Conread position:
               322-533
               

               Cow position:
               chr10:60491180-60491377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               185, 49
               

               Conread position:
               322-545
               

               Cow position:
               chr10:60446819-60446601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               84, 55
               

               Conread position:
               322-568
               

               Cow position:
               chr10:47690474-47690235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               151, 55
               

               Conread position:
               322-581
               

               Cow position:
               chr10:38513261-38513007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               108, 51
               

               Conread position:
               322-583
               

               Cow position:
               chr10:16093296-16093046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               146, 56
               

               Conread position:
               322-583
               

               Cow position:
               chr10:25699736-25699483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               323-576
               

               Cow position:
               chr10:38725740-38725493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               180, 54
               

               Conread position:
               324-479
               

               Cow position:
               chr10:25822159-25822311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 49
               

               Conread position:
               324-523
               

               Cow position:
               chr10:42230877-42230680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               155, 53
               

               Conread position:
               324-546
               

               Cow position:
               chr10:45624072-45624282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               97, 53
               

               Conread position:
               324-551
               

               Cow position:
               chr10:12919272-12919493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               324-555
               

               Cow position:
               chr10:46492909-46493139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               324-562
               

               Cow position:
               chr10:25260332-25260105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               151, 38
               

               Conread position:
               324-580
               

               Cow position:
               chr10:62286641-62286386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               153, 49
               

               Conread position:
               324-582
               

               Cow position:
               chr10:22321607-22321354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               146, 52
               

               Conread position:
               324-582
               

               Cow position:
               chr10:58259441-58259684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               156, 22
               

               Conread position:
               324-585
               

               Cow position:
               chr10:13390963-13391221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 53
               

               Conread position:
               324-585
               

               Cow position:
               chr10:15318970-15318712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               325-502
               

               Cow position:
               chr10:17293348-17293523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               147, 52
               

               Conread position:
               325-541
               

               Cow position:
               chr10:7383530-7383738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               325-556
               

               Cow position:
               chr10:69997717-69997945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               18, 22
               

               Conread position:
               325-582
               

               Cow position:
               chr10:67626912-67627161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               143, 52
               

               Conread position:
               325-585
               

               Cow position:
               chr10:22527818-22528075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 52
               

               Conread position:
               325-585
               

               Cow position:
               chr10:23936560-23936313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               325-585
               

               Cow position:
               chr10:28152296-28152551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               155, 16
               

               Conread position:
               325-585
               

               Cow position:
               chr10:39875070-39875317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               325-585
               

               Cow position:
               chr10:41802809-41803065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               325-585
               

               Cow position:
               chr10:46195866-46195611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 52
               

               Conread position:
               326-582
               

               Cow position:
               chr10:3362709-3362454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               87, 51
               

               Conread position:
               326-585
               

               Cow position:
               chr10:48573597-48573863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               210, 51
               

               Conread position:
               327-581
               

               Cow position:
               chr10:13311814-13311568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               327-582
               

               Cow position:
               chr10:53357977-53357732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               149, 50
               

               Conread position:
               327-585
               

               Cow position:
               chr10:33732791-33733039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               327-585
               

               Cow position:
               chr10:67020706-67020454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               328-582
               

               Cow position:
               chr10:6505432-6505195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               330-544
               

               Cow position:
               chr10:533610-533399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               330-582
               

               Cow position:
               chr10:8923358-8923109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 47
               

               Conread position:
               331-585
               

               Cow position:
               chr10:47412029-47412276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               340-585
               

               Cow position:
               chr10:24781257-24781016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 38
               

               Conread position:
               343-582
               

               Cow position:
               chr10:54469328-54469562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               343-585
               

               Cow position:
               chr10:10964053-10963819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               133, 34
               

               Conread position:
               346-498
               

               Cow position:
               chr10:6252434-6252583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               346-545
               

               Cow position:
               chr10:49038647-49038448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 31
               

               Conread position:
               346-582
               

               Cow position:
               chr10:805252-805030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               157, 16
               

               Conread position:
               346-585
               

               Cow position:
               chr10:5264873-5264649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               346-585
               

               Cow position:
               chr10:42892908-42893136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               352-582
               

               Cow position:
               chr10:24744602-24744379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               353-581
               

               Cow position:
               chr10:33240624-33240845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               355-581
               

               Cow position:
               chr10:48255171-48255391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               174, 22
               

               Conread position:
               355-582
               

               Cow position:
               chr10:35767036-35767251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               204, 22
               

               Conread position:
               365-585
               

               Cow position:
               chr10:1428083-1427872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               115, 16
               

               Conread position:
               366-582
               

               Cow position:
               chr10:27716798-27717010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               165, 11
               

               Conread position:
               366-585
               

               Cow position:
               chr10:48513039-48513255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               373-582
               

               Cow position:
               chr10:37287137-37287342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               95, 28
               

               Conread position:
               373-585
               

               Cow position:
               chr10:29070195-29069990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               161, 87
               

               Conread position:
               376-581
               

               Cow position:
               chr10:24096337-24096543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               106, 85
               

               Conread position:
               376-581
               

               Cow position:
               chr10:34607597-34607394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               377-521
               

               Cow position:
               chr10:30216671-30216815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               91, 75
               

               Conread position:
               377-582
               

               Cow position:
               chr10:22520127-22520332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               380-579
               

               Cow position:
               chr10:29816634-29816427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 143
               

               Conread position:
               381-585
               

               Cow position:
               chr10:35857031-35857226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               103, 67
               

               Conread position:
               383-567
               

               Cow position:
               chr10:64876548-64876362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               171, 79
               

               Conread position:
               383-581
               

               Cow position:
               chr10:34898007-34897822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               384-573
               

               Cow position:
               chr10:21015960-21016149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 82
               

               Conread position:
               384-585
               

               Cow position:
               chr10:39303819-39304022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               37, 79
               

               Conread position:
               394-582
               

               Cow position:
               chr10:6173375-6173191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               394-582
               

               Cow position:
               chr10:20372107-20372296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               156, 81
               

               Conread position:
               394-585
               

               Cow position:
               chr10:35856339-35856521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               395-585
               

               Cow position:
               chr10:21037321-21037141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               396-557
               

               Cow position:
               chr10:17584021-17584183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 66
               

               Conread position:
               396-581
               

               Cow position:
               chr10:32417369-32417186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               403-579
               

               Cow position:
               chr10:1417110-1416937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               74, 13
               

               Conread position:
               421-585
               

               Cow position:
               chr10:15294358-15294193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               422-568
               

               Cow position:
               chr10:24971621-24971767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               423-582
               

               Cow position:
               chr10:3985417-3985259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               423-582
               

               Cow position:
               chr10:60032581-60032743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 38
               

               Conread position:
               423-585
               

               Cow position:
               chr10:19678862-19678700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               424-585
               

               Cow position:
               chr10:24871878-24871717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               426-580
               

               Cow position:
               chr10:20505531-20505372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               432-566
               

               Cow position:
               chr10:29090712-29090841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               432-585
               

               Cow position:
               chr10:55849337-55849185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               28, 44
               

               Conread position:
               436-582
               

               Cow position:
               chr10:20447072-20446926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               445-585
               

               Cow position:
               chr10:35026446-35026307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               461-583
               

               Cow position:
               chr10:9445062-9445183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               463-581
               

               Cow position:
               chr10:32503398-32503280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               475-582
               

               Cow position:
               chr10:14975857-14975963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               480-581
               

               Cow position:
               chr10:60346072-60345972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               94, 0
               
Show alignments to all cow chromosomes.
Conread position:	79-585
Cow position:	chr10:38014695-38014194 (view UCSC Genome Browser custom track)
Alignm length:	509
Alignm identity:	204
Alignm E-value:	0
Alignm gaps (pig, cow):	392, 267
Conread position:	153-583
Cow position:	chr10:56392020-56392444 (view UCSC Genome Browser custom track)
Alignm length:	431
Alignm identity:	124
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	297, 0
Conread position:	175-585
Cow position:	chr10:59572137-59571730 (view UCSC Genome Browser custom track)
Alignm length:	420
Alignm identity:	291
Alignm E-value:	0
Alignm gaps (pig, cow):	7, 23
Conread position:	189-440
Cow position:	chr10:27178717-27178467 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	186
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	40, 22
Conread position:	204-580
Cow position:	chr10:13586922-13586547 (view UCSC Genome Browser custom track)
Alignm length:	393
Alignm identity:	263
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	16, 104
Conread position:	208-580
Cow position:	chr10:6852465-6852105 (view UCSC Genome Browser custom track)
Alignm length:	378
Alignm identity:	252
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	57, 35
Conread position:	211-585
Cow position:	chr10:60388571-60388932 (view UCSC Genome Browser custom track)
Alignm length:	377
Alignm identity:	234
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	11, 33
Conread position:	215-464
Cow position:	chr10:23310824-23311080 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	183
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	52, 173
Conread position:	217-432
Cow position:	chr10:40999060-40998835 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	163
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	50, 15
Conread position:	217-577
Cow position:	chr10:16414369-16414749 (view UCSC Genome Browser custom track)
Alignm length:	392
Alignm identity:	275
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	20, 150
Conread position:	217-585
Cow position:	chr10:67442915-67443277 (view UCSC Genome Browser custom track)
Alignm length:	383
Alignm identity:	263
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	7, 128
Conread position:	219-583
Cow position:	chr10:56475650-56475296 (view UCSC Genome Browser custom track)
Alignm length:	369
Alignm identity:	247
Alignm E-value:	5e-35
Alignm gaps (pig, cow):	193, 15
Conread position:	219-585
Cow position:	chr10:34661127-34661485 (view UCSC Genome Browser custom track)
Alignm length:	378
Alignm identity:	275
Alignm E-value:	0
Alignm gaps (pig, cow):	23, 62
Conread position:	222-585
Cow position:	chr10:37529073-37529437 (view UCSC Genome Browser custom track)
Alignm length:	371
Alignm identity:	272
Alignm E-value:	0
Alignm gaps (pig, cow):	23, 161
Conread position:	224-432
Cow position:	chr10:24971133-24971347 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	156
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	42, 111
Conread position:	226-506
Cow position:	chr10:23346111-23346396 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	211
Alignm E-value:	8e-39
Alignm gaps (pig, cow):	41, 152
Conread position:	226-569
Cow position:	chr10:66199510-66199865 (view UCSC Genome Browser custom track)
Alignm length:	360
Alignm identity:	248
Alignm E-value:	8.99999e-40
Alignm gaps (pig, cow):	46, 217
Conread position:	226-583
Cow position:	chr10:4109773-4109420 (view UCSC Genome Browser custom track)
Alignm length:	366
Alignm identity:	247
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	41, 17
Conread position:	227-473
Cow position:	chr10:17150067-17149819 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	179
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	40, 156
Conread position:	227-577
Cow position:	chr10:53179457-53179133 (view UCSC Genome Browser custom track)
Alignm length:	356
Alignm identity:	235
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	91, 45