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Cow genome map

           
Conread name:
           
rnmm07c_i8.y1
        

               
Conread position:
               
216-582
               

               
Cow position:
               
chr29:4874666-4875039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
64, 87
               

               
Conread position:
               
218-553
               

               
Cow position:
               
chr29:5063368-5063031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
226-443
               

               
Cow position:
               
chr29:22729786-22729558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 165
               

               
Conread position:
               
228-585
               

               
Cow position:
               
chr29:10818243-10818584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 154
               

               
Conread position:
               
228-585
               

               
Cow position:
               
chr29:34773532-34773883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
230-555
               

               
Cow position:
               
chr29:12625783-12626098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
232-576
               

               
Cow position:
               
chr29:28196807-28197146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
232-578
               

               
Cow position:
               
chr29:22613634-22613284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 126
               

               
Conread position:
               
232-582
               

               
Cow position:
               
chr29:35292300-35291944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
232-585
               

               
Cow position:
               
chr29:22162051-22162402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
234-541
               

               
Cow position:
               
chr29:8862287-8862583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
238-582
               

               
Cow position:
               
chr29:732817-732475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
240-583
               

               
Cow position:
               
chr29:4085501-4085172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
240-585
               

               
Cow position:
               
chr29:25737215-25737567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
243-524
               

               
Cow position:
               
chr29:7624367-7624088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
243-585
               

               
Cow position:
               
chr29:356507-356177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
246-577
               

               
Cow position:
               
chr29:16309920-16309601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
251-583
               

               
Cow position:
               
chr29:28195339-28195661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
279-576
               

               
Cow position:
               
chr29:11647250-11646955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
7, 101
               

               
Conread position:
               
281-585
               

               
Cow position:
               
chr29:32290763-32290453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
292-568
               

               
Cow position:
               
chr29:25333323-25333593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
180, 84
               

               
Conread position:
               
292-585
               

               
Cow position:
               
chr29:4480035-4480321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 85
               

               
Conread position:
               
293-579
               

               
Cow position:
               
chr29:27589060-27588780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
295-413
               

               
Cow position:
               
chr29:35070949-35071064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
295-440
               

               
Cow position:
               
chr29:19125457-19125315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
295-530
               

               
Cow position:
               
chr29:2262860-2263091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
194, 84
               

               
Conread position:
               
295-580
               

               
Cow position:
               
chr29:10156171-10156449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 75
               

               
Conread position:
               
296-573
               

               
Cow position:
               
chr29:27858921-27858655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
183, 80
               

               
Conread position:
               
296-582
               

               
Cow position:
               
chr29:23243744-23244026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
296-582
               

               
Cow position:
               
chr29:37618440-37618160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 52
               

               
Conread position:
               
298-583
               

               
Cow position:
               
chr29:13372795-13372518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
299-582
               

               
Cow position:
               
chr29:13639235-13639516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
302-453
               

               
Cow position:
               
chr29:39038139-39038289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
302-582
               

               
Cow position:
               
chr29:24252363-24252092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
186, 75
               

               
Conread position:
               
302-582
               

               
Cow position:
               
chr29:31929115-31928835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
172, 74
               

               
Conread position:
               
302-584
               

               
Cow position:
               
chr29:10058410-10058684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
169, 40
               

               
Conread position:
               
302-585
               

               
Cow position:
               
chr29:19762396-19762127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
303-444
               

               
Cow position:
               
chr29:19363837-19363700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
303-446
               

               
Cow position:
               
chr29:29308443-29308585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr29:29923445-29923639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
303-501
               

               
Cow position:
               
chr29:38978660-38978464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
303-501
               

               
Cow position:
               
chr29:44139116-44139311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
303-545
               

               
Cow position:
               
chr29:1007947-1007707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
174, 39
               

               
Conread position:
               
303-578
               

               
Cow position:
               
chr29:28166095-28166355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
303-578
               

               
Cow position:
               
chr29:43099618-43099886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
303-581
               

               
Cow position:
               
chr29:36530995-36530722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
303-582
               

               
Cow position:
               
chr29:10839068-10838804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
303-582
               

               
Cow position:
               
chr29:17110084-17109822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
303-582
               

               
Cow position:
               
chr29:19949434-19949167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
131, 73
               

               
Conread position:
               
303-583
               

               
Cow position:
               
chr29:11915947-11915673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
158, 75
               

               
Conread position:
               
304-458
               

               
Cow position:
               
chr29:22723727-22723576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
304-585
               

               
Cow position:
               
chr29:6286035-6286308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
246, 73
               

               
Conread position:
               
305-521
               

               
Cow position:
               
chr29:20770469-20770258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
156, 71
               

               
Conread position:
               
305-585
               

               
Cow position:
               
chr29:12783838-12784106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
305-585
               

               
Cow position:
               
chr29:34745534-34745811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
175, 50
               

               
Conread position:
               
306-501
               

               
Cow position:
               
chr29:32176796-32176614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
306-585
               

               
Cow position:
               
chr29:36217236-36216968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
307-447
               

               
Cow position:
               
chr29:36781181-36781318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
307-554
               

               
Cow position:
               
chr29:26559123-26559358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
307-579
               

               
Cow position:
               
chr29:43251042-43251310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
307-582
               

               
Cow position:
               
chr29:12025353-12025617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
307-583
               

               
Cow position:
               
chr29:22175804-22175541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
307-583
               

               
Cow position:
               
chr29:40298897-40299159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
213, 69
               

               
Conread position:
               
307-585
               

               
Cow position:
               
chr29:12680277-12680009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
308-513
               

               
Cow position:
               
chr29:28840278-28840076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
309-531
               

               
Cow position:
               
chr29:22519006-22519226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
309-546
               

               
Cow position:
               
chr29:41112760-41112990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
205, 67
               

               
Conread position:
               
311-580
               

               
Cow position:
               
chr29:38581099-38580835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
311-581
               

               
Cow position:
               
chr29:20903171-20903429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
166, 65
               

               
Conread position:
               
311-582
               

               
Cow position:
               
chr29:39111195-39111461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
314-585
               

               
Cow position:
               
chr29:4367842-4367571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
147, 63
               

               
Conread position:
               
315-459
               

               
Cow position:
               
chr29:17804649-17804509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
315-529
               

               
Cow position:
               
chr29:18085689-18085477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
315-541
               

               
Cow position:
               
chr29:5520370-5520610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
315-545
               

               
Cow position:
               
chr29:847527-847750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 99
               

               
Conread position:
               
315-555
               

               
Cow position:
               
chr29:13028555-13028319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
151, 61
               

               
Conread position:
               
315-565
               

               
Cow position:
               
chr29:34358863-34359109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
315-566
               

               
Cow position:
               
chr29:29176502-29176745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
315-575
               

               
Cow position:
               
chr29:4003007-4002757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
315-579
               

               
Cow position:
               
chr29:40097077-40096817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
315-581
               

               
Cow position:
               
chr29:17297251-17296986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
315-581
               

               
Cow position:
               
chr29:22936386-22936130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
315-581
               

               
Cow position:
               
chr29:44008668-44008927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr29:16609863-16609595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr29:21443223-21443490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr29:25092221-25091966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 62
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr29:35501540-35501797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr29:36220649-36220382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
160, 57
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr29:41530964-41530703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
262, 31
               

               
Conread position:
               
315-583
               

               
Cow position:
               
chr29:6844517-6844778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr29:1557046-1556783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr29:17154893-17154618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr29:19339116-19338834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr29:24624364-24624102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr29:29314545-29314804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr29:32210956-32211205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr29:36210253-36210013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr29:40117686-40117423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
191, 57
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr29:43008969-43009231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
316-446
               

               
Cow position:
               
chr29:7290890-7290763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
316-501
               

               
Cow position:
               
chr29:38979961-38980136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
316-529
               

               
Cow position:
               
chr29:21666201-21665994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
316-541
               

               
Cow position:
               
chr29:8926347-8926568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
159, 61
               

               
Conread position:
               
316-578
               

               
Cow position:
               
chr29:19428774-19428516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
316-582
               

               
Cow position:
               
chr29:86898-87164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
316-582
               

               
Cow position:
               
chr29:1325553-1325295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
316-582
               

               
Cow position:
               
chr29:4334832-4334581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
231, 46
               

               
Conread position:
               
316-582
               

               
Cow position:
               
chr29:11053745-11054006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
316-582
               

               
Cow position:
               
chr29:32799598-32799858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
241, 61
               

               
Conread position:
               
316-585
               

               
Cow position:
               
chr29:9709809-9709547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
116, 61
               

               
Conread position:
               
317-515
               

               
Cow position:
               
chr29:23825097-23825299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
317-546
               

               
Cow position:
               
chr29:1615042-1614815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
144, 59
               

               
Conread position:
               
317-577
               

               
Cow position:
               
chr29:2056174-2055916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
159, 60
               

               
Conread position:
               
317-578
               

               
Cow position:
               
chr29:4120967-4120701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
317-580
               

               
Cow position:
               
chr29:41811477-41811726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
317-582
               

               
Cow position:
               
chr29:29769238-29769497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
151, 56
               

               
Conread position:
               
317-583
               

               
Cow position:
               
chr29:17409448-17409184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
157, 60
               

               
Conread position:
               
317-585
               

               
Cow position:
               
chr29:5892958-5892701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
143, 60
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr29:30548888-30548694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
318-580
               

               
Cow position:
               
chr29:31489431-31489177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
319-457
               

               
Cow position:
               
chr29:742538-742673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
319-511
               

               
Cow position:
               
chr29:23220390-23220577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
319-519
               

               
Cow position:
               
chr29:22028844-22029041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 57
               

               
Conread position:
               
319-541
               

               
Cow position:
               
chr29:6015237-6015017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
319-580
               

               
Cow position:
               
chr29:11397815-11398067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
319-581
               

               
Cow position:
               
chr29:40583896-40583648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
319-582
               

               
Cow position:
               
chr29:6293369-6293622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 26
               

               
Conread position:
               
319-582
               

               
Cow position:
               
chr29:25088854-25088607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
319-583
               

               
Cow position:
               
chr29:10235026-10235276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
160, 12
               

               
Conread position:
               
319-585
               

               
Cow position:
               
chr29:2744159-2744421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
162, 19
               

               
Conread position:
               
319-585
               

               
Cow position:
               
chr29:9912287-9912023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
319-585
               

               
Cow position:
               
chr29:16195951-16195700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
319-585
               

               
Cow position:
               
chr29:17607527-17607271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
320-464
               

               
Cow position:
               
chr29:32197807-32197666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
320-509
               

               
Cow position:
               
chr29:29324316-29324487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
320-582
               

               
Cow position:
               
chr29:26416460-26416214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
141, 7
               

               
Conread position:
               
320-585
               

               
Cow position:
               
chr29:5186383-5186644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 57
               

               
Conread position:
               
320-585
               

               
Cow position:
               
chr29:39567792-39567538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
320-585
               

               
Cow position:
               
chr29:42363906-42364163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
322-573
               

               
Cow position:
               
chr29:27330000-27329755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
322-585
               

               
Cow position:
               
chr29:24952793-24952539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
322-585
               

               
Cow position:
               
chr29:45005521-45005772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
323-516
               

               
Cow position:
               
chr29:18012665-18012474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
157, 55
               

               
Conread position:
               
323-582
               

               
Cow position:
               
chr29:2984997-2984738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
153, 50
               

               
Conread position:
               
324-533
               

               
Cow position:
               
chr29:23155332-23155131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
325-573
               

               
Cow position:
               
chr29:26615612-26615859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
325-577
               

               
Cow position:
               
chr29:31943973-31943739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
325-585
               

               
Cow position:
               
chr29:28446151-28446405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
328-539
               

               
Cow position:
               
chr29:24578965-24578755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
131, 49
               

               
Conread position:
               
328-581
               

               
Cow position:
               
chr29:43328746-43328495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
152, 49
               

               
Conread position:
               
328-585
               

               
Cow position:
               
chr29:27826622-27826377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
329-579
               

               
Cow position:
               
chr29:5098665-5098903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
329-582
               

               
Cow position:
               
chr29:28868744-28868490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
333-582
               

               
Cow position:
               
chr29:4520433-4520189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 42
               

               
Conread position:
               
333-585
               

               
Cow position:
               
chr29:23983858-23984108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
345-581
               

               
Cow position:
               
chr29:25814752-25814980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
346-577
               

               
Cow position:
               
chr29:11562697-11562474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
346-583
               

               
Cow position:
               
chr29:868859-868626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
204, 31
               

               
Conread position:
               
346-583
               

               
Cow position:
               
chr29:6926089-6925865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
348-580
               

               
Cow position:
               
chr29:44682022-44682241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
350-581
               

               
Cow position:
               
chr29:40166324-40166100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
120, 27
               

               
Conread position:
               
353-573
               

               
Cow position:
               
chr29:26672834-26673043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
177, 24
               

               
Conread position:
               
354-585
               

               
Cow position:
               
chr29:15940554-15940782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
354-585
               

               
Cow position:
               
chr29:41365185-41364961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
196, 27
               

               
Conread position:
               
355-585
               

               
Cow position:
               
chr29:22714648-22714873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
355-585
               

               
Cow position:
               
chr29:24103466-24103694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
356-582
               

               
Cow position:
               
chr29:22778102-22778324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
191, 21
               

               
Conread position:
               
363-585
               

               
Cow position:
               
chr29:9718705-9718918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
366-585
               

               
Cow position:
               
chr29:31674697-31674481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
368-582
               

               
Cow position:
               
chr29:10456500-10456705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
376-581
               

               
Cow position:
               
chr29:10018636-10018429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 86
               

               
Conread position:
               
376-581
               

               
Cow position:
               
chr29:16657756-16657543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
376-582
               

               
Cow position:
               
chr29:6337720-6337514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
180, 99
               

               
Conread position:
               
376-582
               

               
Cow position:
               
chr29:17301591-17301383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
97, 80
               

               
Conread position:
               
376-585
               

               
Cow position:
               
chr29:29795325-29795537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
100, 85
               

               
Conread position:
               
383-572
               

               
Cow position:
               
chr29:11135846-11136027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
383-581
               

               
Cow position:
               
chr29:19792226-19792421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
383-583
               

               
Cow position:
               
chr29:41747498-41747290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
385-527
               

               
Cow position:
               
chr29:16011613-16011756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
79, 141
               

               
Conread position:
               
385-583
               

               
Cow position:
               
chr29:31926241-31926437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
162, 76
               

               
Conread position:
               
388-581
               

               
Cow position:
               
chr29:29975083-29974899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
388-585
               

               
Cow position:
               
chr29:1124700-1124506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
389-581
               

               
Cow position:
               
chr29:42849269-42849078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
394-579
               

               
Cow position:
               
chr29:3502610-3502425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
73, 159
               

               
Conread position:
               
394-582
               

               
Cow position:
               
chr29:14484498-14484692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
394-582
               

               
Cow position:
               
chr29:31594088-31594276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-585
               

               
Cow position:
               
chr29:26986969-26986783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
397-581
               

               
Cow position:
               
chr29:1395633-1395452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
423-583
               

               
Cow position:
               
chr29:30188327-30188487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
436-582
               

               
Cow position:
               
chr29:3396105-3395960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
436-582
               

               
Cow position:
               
chr29:8125591-8125737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
456-585
               

               
Cow position:
               
chr29:21000620-21000494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
475-582
               

               
Cow position:
               
chr29:29262991-29262886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               
Show alignments to all cow chromosomes.