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Cow genome map

           
Conread name:
           
rnmm07c_i8.y1
        

               
Conread position:
               
211-566
               

               
Cow position:
               
chr4:52780069-52779716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
217-585
               

               
Cow position:
               
chr4:21065249-21064883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
218-508
               

               
Cow position:
               
chr4:60719313-60719021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
8, 164
               

               
Conread position:
               
218-583
               

               
Cow position:
               
chr4:37935084-37935437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
221-583
               

               
Cow position:
               
chr4:12561236-12560877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
222-524
               

               
Cow position:
               
chr4:32694005-32693690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 165
               

               
Conread position:
               
222-582
               

               
Cow position:
               
chr4:45685669-45685316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
222-585
               

               
Cow position:
               
chr4:59785537-59785162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
29, 138
               

               
Conread position:
               
223-583
               

               
Cow position:
               
chr4:961450-961817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
224-580
               

               
Cow position:
               
chr4:9681504-9681150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
224-582
               

               
Cow position:
               
chr4:23846844-23847200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
225-580
               

               
Cow position:
               
chr4:68806216-68805880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
226-546
               

               
Cow position:
               
chr4:38156881-38157207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 159
               

               
Conread position:
               
226-585
               

               
Cow position:
               
chr4:17774153-17774509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
227-576
               

               
Cow position:
               
chr4:3688138-3687777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
228-582
               

               
Cow position:
               
chr4:61897342-61897688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 42
               

               
Conread position:
               
228-583
               

               
Cow position:
               
chr4:29291714-29291366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
230-585
               

               
Cow position:
               
chr4:4186325-4185969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 158
               

               
Conread position:
               
232-459
               

               
Cow position:
               
chr4:38209769-38210006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 158
               

               
Conread position:
               
232-495
               

               
Cow position:
               
chr4:28701550-28701289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
232-529
               

               
Cow position:
               
chr4:44903489-44903186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
232-582
               

               
Cow position:
               
chr4:4320788-4321154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
232-585
               

               
Cow position:
               
chr4:28771865-28772222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
233-450
               

               
Cow position:
               
chr4:18098857-18099084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
233-511
               

               
Cow position:
               
chr4:46566266-46566555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 156
               

               
Conread position:
               
233-585
               

               
Cow position:
               
chr4:28839815-28839470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
234-581
               

               
Cow position:
               
chr4:41370738-41371091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
234-582
               

               
Cow position:
               
chr4:49794854-49794522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
235-455
               

               
Cow position:
               
chr4:10558739-10558509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 155
               

               
Conread position:
               
235-580
               

               
Cow position:
               
chr4:4084254-4084598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
235-585
               

               
Cow position:
               
chr4:20327520-20327865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
236-544
               

               
Cow position:
               
chr4:61066955-61066660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
236-585
               

               
Cow position:
               
chr4:66172592-66172953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 239
               

               
Conread position:
               
237-581
               

               
Cow position:
               
chr4:13344737-13344395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
30, 147
               

               
Conread position:
               
238-583
               

               
Cow position:
               
chr4:56239664-56240003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
55, 149
               

               
Conread position:
               
240-583
               

               
Cow position:
               
chr4:29384042-29384375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 145
               

               
Conread position:
               
242-582
               

               
Cow position:
               
chr4:68234159-68233824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
47, 104
               

               
Conread position:
               
243-499
               

               
Cow position:
               
chr4:20141793-20142036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
243-513
               

               
Cow position:
               
chr4:34510024-34509757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
51, 137
               

               
Conread position:
               
243-556
               

               
Cow position:
               
chr4:34699849-34700164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
243-582
               

               
Cow position:
               
chr4:19597137-19597468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
243-582
               

               
Cow position:
               
chr4:53208479-53208143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
243-583
               

               
Cow position:
               
chr4:36929487-36929164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
243-585
               

               
Cow position:
               
chr4:25356135-25356457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
243-585
               

               
Cow position:
               
chr4:38935553-38935201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 117
               

               
Conread position:
               
244-431
               

               
Cow position:
               
chr4:32602020-32601834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 134
               

               
Conread position:
               
252-582
               

               
Cow position:
               
chr4:16881187-16881515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
279-556
               

               
Cow position:
               
chr4:45636310-45636038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
283-493
               

               
Cow position:
               
chr4:26012543-26012333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
284-468
               

               
Cow position:
               
chr4:60442904-60443080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
292-510
               

               
Cow position:
               
chr4:10851316-10851529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
292-529
               

               
Cow position:
               
chr4:8901-9130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
175, 45
               

               
Conread position:
               
292-544
               

               
Cow position:
               
chr4:17084206-17084455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
292-555
               

               
Cow position:
               
chr4:13222054-13222307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
292-556
               

               
Cow position:
               
chr4:10905333-10905591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
292-560
               

               
Cow position:
               
chr4:48396661-48396924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
292-577
               

               
Cow position:
               
chr4:36577494-36577777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 86
               

               
Conread position:
               
292-579
               

               
Cow position:
               
chr4:54524211-54524479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
292-585
               

               
Cow position:
               
chr4:10379244-10378953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 91
               

               
Conread position:
               
292-585
               

               
Cow position:
               
chr4:19321943-19322238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
293-433
               

               
Cow position:
               
chr4:2593976-2593843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
293-573
               

               
Cow position:
               
chr4:19700227-19699963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
293-582
               

               
Cow position:
               
chr4:45589469-45589748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 55
               

               
Conread position:
               
293-585
               

               
Cow position:
               
chr4:36731324-36731039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
293-585
               

               
Cow position:
               
chr4:51784312-51784023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
294-505
               

               
Cow position:
               
chr4:61235075-61235278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
162, 43
               

               
Conread position:
               
295-585
               

               
Cow position:
               
chr4:54478792-54479059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
208, 82
               

               
Conread position:
               
295-585
               

               
Cow position:
               
chr4:59277350-59277631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
296-497
               

               
Cow position:
               
chr4:54541507-54541708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
298-507
               

               
Cow position:
               
chr4:69290616-69290816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
298-581
               

               
Cow position:
               
chr4:42921733-42922003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 78
               

               
Conread position:
               
298-583
               

               
Cow position:
               
chr4:14153234-14152935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
298-583
               

               
Cow position:
               
chr4:51769233-51768959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
299-583
               

               
Cow position:
               
chr4:66547641-66547920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
301-582
               

               
Cow position:
               
chr4:34631023-34630742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
301-584
               

               
Cow position:
               
chr4:6653844-6653575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
178, 18
               

               
Conread position:
               
302-505
               

               
Cow position:
               
chr4:8182513-8182715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
302-529
               

               
Cow position:
               
chr4:46476823-46477052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
302-559
               

               
Cow position:
               
chr4:38946338-38946079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
302-568
               

               
Cow position:
               
chr4:46527127-46526858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
302-580
               

               
Cow position:
               
chr4:48486119-48485854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
302-582
               

               
Cow position:
               
chr4:53100925-53100657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
302-582
               

               
Cow position:
               
chr4:61313090-61313360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
248, 74
               

               
Conread position:
               
302-585
               

               
Cow position:
               
chr4:1026112-1026380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
302-585
               

               
Cow position:
               
chr4:7808696-7808431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
303-459
               

               
Cow position:
               
chr4:46404786-46404935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
303-472
               

               
Cow position:
               
chr4:44854169-44854333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
303-475
               

               
Cow position:
               
chr4:18952099-18951926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
303-477
               

               
Cow position:
               
chr4:51920666-51920496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
303-539
               

               
Cow position:
               
chr4:45074181-45073955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
179, 73
               

               
Conread position:
               
303-545
               

               
Cow position:
               
chr4:214137-213904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
167, 74
               

               
Conread position:
               
303-556
               

               
Cow position:
               
chr4:19578509-19578277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
303-568
               

               
Cow position:
               
chr4:21874300-21874036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
303-580
               

               
Cow position:
               
chr4:62472201-62471922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 68
               

               
Conread position:
               
303-581
               

               
Cow position:
               
chr4:26659422-26659153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
162, 68
               

               
Conread position:
               
303-582
               

               
Cow position:
               
chr4:15905224-15904946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
303-582
               

               
Cow position:
               
chr4:19119141-19118854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
303-582
               

               
Cow position:
               
chr4:27276422-27276698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
303-582
               

               
Cow position:
               
chr4:38944136-38944413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 74
               

               
Conread position:
               
303-582
               

               
Cow position:
               
chr4:42423683-42423950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
303-582
               

               
Cow position:
               
chr4:52748337-52748610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
173, 22
               

               
Conread position:
               
303-583
               

               
Cow position:
               
chr4:2602352-2602078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
175, 46
               

               
Conread position:
               
303-585
               

               
Cow position:
               
chr4:3388665-3388389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
303-585
               

               
Cow position:
               
chr4:7571534-7571255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
304-472
               

               
Cow position:
               
chr4:60141401-60141559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
304-489
               

               
Cow position:
               
chr4:65131333-65131514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
304-583
               

               
Cow position:
               
chr4:49629602-49629330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 63
               

               
Conread position:
               
305-436
               

               
Cow position:
               
chr4:51083219-51083345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
305-464
               

               
Cow position:
               
chr4:36744698-36744544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
110, 71
               

               
Conread position:
               
305-568
               

               
Cow position:
               
chr4:25537670-25537407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
305-576
               

               
Cow position:
               
chr4:54927320-54927586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
305-582
               

               
Cow position:
               
chr4:31505904-31506184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
305-582
               

               
Cow position:
               
chr4:37915216-37915490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 72
               

               
Conread position:
               
305-582
               

               
Cow position:
               
chr4:45775218-45775499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
204, 74
               

               
Conread position:
               
305-585
               

               
Cow position:
               
chr4:3421746-3421472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
306-579
               

               
Cow position:
               
chr4:26401073-26400811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
244, 13
               

               
Conread position:
               
306-582
               

               
Cow position:
               
chr4:12004333-12004068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
250, 69
               

               
Conread position:
               
306-582
               

               
Cow position:
               
chr4:41300879-41301143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
306-583
               

               
Cow position:
               
chr4:58248520-58248251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
307-450
               

               
Cow position:
               
chr4:34983381-34983519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
141, 69
               

               
Conread position:
               
307-497
               

               
Cow position:
               
chr4:49800808-49800626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
307-573
               

               
Cow position:
               
chr4:37313283-37313027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
307-573
               

               
Cow position:
               
chr4:68387910-68387648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
154, 70
               

               
Conread position:
               
307-581
               

               
Cow position:
               
chr4:51728196-51727925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
307-581
               

               
Cow position:
               
chr4:54455226-54455494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
307-581
               

               
Cow position:
               
chr4:63095956-63096224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 70
               

               
Conread position:
               
307-582
               

               
Cow position:
               
chr4:30792086-30791816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
175, 64
               

               
Conread position:
               
307-585
               

               
Cow position:
               
chr4:4319033-4319300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
307-585
               

               
Cow position:
               
chr4:16594202-16593928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
307-585
               

               
Cow position:
               
chr4:19435373-19435105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
307-585
               

               
Cow position:
               
chr4:20147303-20147031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
307-585
               

               
Cow position:
               
chr4:51851330-51851046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 192
               

               
Conread position:
               
308-459
               

               
Cow position:
               
chr4:13241739-13241594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
308-547
               

               
Cow position:
               
chr4:12442009-12441776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
203, 11
               

               
Conread position:
               
309-482
               

               
Cow position:
               
chr4:46435440-46435270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
309-519
               

               
Cow position:
               
chr4:19324090-19323884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
169, 68
               

               
Conread position:
               
309-581
               

               
Cow position:
               
chr4:31004293-31004559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
238, 68
               

               
Conread position:
               
309-585
               

               
Cow position:
               
chr4:17186235-17186508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 67
               

               
Conread position:
               
310-582
               

               
Cow position:
               
chr4:27530233-27529965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
310-585
               

               
Cow position:
               
chr4:21531529-21531799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 67
               

               
Conread position:
               
311-478
               

               
Cow position:
               
chr4:65753136-65753297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
311-580
               

               
Cow position:
               
chr4:11871804-11872058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
311-582
               

               
Cow position:
               
chr4:1495295-1495557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
312-517
               

               
Cow position:
               
chr4:49826365-49826166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
312-582
               

               
Cow position:
               
chr4:45583010-45583275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
238, 64
               

               
Conread position:
               
313-577
               

               
Cow position:
               
chr4:30169725-30169970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
313-582
               

               
Cow position:
               
chr4:13973858-13974121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
163, 64
               

               
Conread position:
               
313-583
               

               
Cow position:
               
chr4:12127526-12127795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
314-540
               

               
Cow position:
               
chr4:45595920-45596140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
5, 69
               

               
Conread position:
               
314-585
               

               
Cow position:
               
chr4:45367849-45367578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
150, 5
               

               
Conread position:
               
315-446
               

               
Cow position:
               
chr4:43916400-43916270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
315-449
               

               
Cow position:
               
chr4:60527290-60527160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
315-459
               

               
Cow position:
               
chr4:386286-386423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
315-459
               

               
Cow position:
               
chr4:48381488-48381350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
315-472
               

               
Cow position:
               
chr4:19333496-19333339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
143, 62
               

               
Conread position:
               
315-481
               

               
Cow position:
               
chr4:16221767-16221927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
315-495
               

               
Cow position:
               
chr4:17851143-17851318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
315-500
               

               
Cow position:
               
chr4:48422984-48422805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
315-522
               

               
Cow position:
               
chr4:19102772-19102977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
156, 62
               

               
Conread position:
               
315-524
               

               
Cow position:
               
chr4:34503406-34503198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
315-524
               

               
Cow position:
               
chr4:45563856-45563648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
315-525
               

               
Cow position:
               
chr4:19098582-19098369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
315-540
               

               
Cow position:
               
chr4:65265196-65265421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
131, 63
               

               
Conread position:
               
315-553
               

               
Cow position:
               
chr4:65175035-65175261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
315-558
               

               
Cow position:
               
chr4:1419336-1419094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
45, 67
               

               
Conread position:
               
315-559
               

               
Cow position:
               
chr4:32259733-32259972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
315-561
               

               
Cow position:
               
chr4:52831905-52832149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
315-563
               

               
Cow position:
               
chr4:24481563-24481797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
315-568
               

               
Cow position:
               
chr4:37732373-37732626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
190, 66
               

               
Conread position:
               
315-568
               

               
Cow position:
               
chr4:49089896-49089651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
315-573
               

               
Cow position:
               
chr4:58880852-58881106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
315-576
               

               
Cow position:
               
chr4:19407888-19408146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
315-577
               

               
Cow position:
               
chr4:2141844-2141598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
315-577
               

               
Cow position:
               
chr4:20026993-20027248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
315-579
               

               
Cow position:
               
chr4:40414518-40414777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
149, 61
               

               
Conread position:
               
315-580
               

               
Cow position:
               
chr4:19582508-19582767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
163, 56
               

               
Conread position:
               
315-580
               

               
Cow position:
               
chr4:45738365-45738628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
132, 62
               

               
Conread position:
               
315-580
               

               
Cow position:
               
chr4:48322144-48321874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
315-581
               

               
Cow position:
               
chr4:12591104-12591365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
232, 61
               

               
Conread position:
               
315-581
               

               
Cow position:
               
chr4:23600277-23600027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
255, 61
               

               
Conread position:
               
315-581
               

               
Cow position:
               
chr4:39128647-39128382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
315-581
               

               
Cow position:
               
chr4:45644209-45644459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
315-581
               

               
Cow position:
               
chr4:62771813-62772076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr4:2099740-2099481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr4:11099546-11099821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr4:19744985-19744733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr4:23444936-23445205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr4:23509703-23509440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
161, 58
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr4:30974438-30974188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr4:36290734-36290476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr4:46455959-46456213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
240, 62
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr4:54191199-54190936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr4:59378019-59377762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
315-583
               

               
Cow position:
               
chr4:22101155-22101413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
315-583
               

               
Cow position:
               
chr4:25879500-25879242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
235, 62
               

               
Conread position:
               
315-583
               

               
Cow position:
               
chr4:37704375-37704113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
315-583
               

               
Cow position:
               
chr4:44782484-44782220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
168, 62
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr4:9815238-9815503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr4:10412479-10412223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr4:19500982-19501239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr4:25888725-25888985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
232, 40
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr4:25984329-25984071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr4:31136864-31136596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 11
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr4:33433148-33433419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr4:35982108-35981838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr4:46550494-46550233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr4:48961376-48961635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
165, 62
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr4:64192078-64192346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
316-450
               

               
Cow position:
               
chr4:33838694-33838822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
316-509
               

               
Cow position:
               
chr4:59002031-59002213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
316-555
               

               
Cow position:
               
chr4:4085002-4085246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
316-566
               

               
Cow position:
               
chr4:85804-85554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
316-570
               

               
Cow position:
               
chr4:60897174-60897416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
316-577
               

               
Cow position:
               
chr4:508800-509050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
316-582
               

               
Cow position:
               
chr4:13941565-13941307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
234, 60
               

               
Conread position:
               
316-582
               

               
Cow position:
               
chr4:22073215-22073468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
235, 61
               

               
Conread position:
               
316-583
               

               
Cow position:
               
chr4:32726333-32726073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
316-583
               

               
Cow position:
               
chr4:45662404-45662661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
316-583
               

               
Cow position:
               
chr4:65950763-65950495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
240, 39
               

               
Conread position:
               
316-585
               

               
Cow position:
               
chr4:24810342-24810596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
317-522
               

               
Cow position:
               
chr4:44772935-44773138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
159, 59
               

               
Conread position:
               
317-546
               

               
Cow position:
               
chr4:37675721-37675499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
317-569
               

               
Cow position:
               
chr4:37344320-37344568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
317-571
               

               
Cow position:
               
chr4:63964883-63965130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
317-581
               

               
Cow position:
               
chr4:22713386-22713642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
317-582
               

               
Cow position:
               
chr4:22138113-22138384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
317-585
               

               
Cow position:
               
chr4:10915729-10915992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
317-585
               

               
Cow position:
               
chr4:11194293-11194030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
150, 59
               

               
Conread position:
               
317-585
               

               
Cow position:
               
chr4:24001860-24002121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
218, 11
               

               
Conread position:
               
317-585
               

               
Cow position:
               
chr4:69543290-69543023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
225, 60
               

               
Conread position:
               
318-573
               

               
Cow position:
               
chr4:18756541-18756290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
318-581
               

               
Cow position:
               
chr4:55395868-55395609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
228, 54
               

               
Conread position:
               
318-583
               

               
Cow position:
               
chr4:49158688-49158938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
250, 59
               

               
Conread position:
               
319-516
               

               
Cow position:
               
chr4:66136502-66136691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
319-541
               

               
Cow position:
               
chr4:13026407-13026191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
160, 20
               

               
Conread position:
               
319-560
               

               
Cow position:
               
chr4:55508141-55508370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
319-577
               

               
Cow position:
               
chr4:33970791-33971045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
319-577
               

               
Cow position:
               
chr4:56570912-56570658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
233, 58
               

               
Conread position:
               
319-580
               

               
Cow position:
               
chr4:19097393-19097139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
319-582
               

               
Cow position:
               
chr4:10732329-10732070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
238, 59
               

               
Conread position:
               
319-582
               

               
Cow position:
               
chr4:34337166-34337419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
141, 58
               

               
Conread position:
               
319-582
               

               
Cow position:
               
chr4:34641621-34641878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 27
               

               
Conread position:
               
319-582
               

               
Cow position:
               
chr4:36893465-36893205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
160, 63
               

               
Conread position:
               
319-582
               

               
Cow position:
               
chr4:61148721-61148441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
319-583
               

               
Cow position:
               
chr4:34369344-34369606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
231, 41
               

               
Conread position:
               
319-583
               

               
Cow position:
               
chr4:41867541-41867291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
159, 33
               

               
Conread position:
               
319-585
               

               
Cow position:
               
chr4:3850657-3850401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
319-585
               

               
Cow position:
               
chr4:13693571-13693829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
319-585
               

               
Cow position:
               
chr4:21391706-21391968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
319-585
               

               
Cow position:
               
chr4:22860605-22860867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
319-585
               

               
Cow position:
               
chr4:33096876-33097131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
319-585
               

               
Cow position:
               
chr4:65815602-65815853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
320-545
               

               
Cow position:
               
chr4:53126216-53126003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
320-582
               

               
Cow position:
               
chr4:21017-20766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
238, 57
               

               
Conread position:
               
320-582
               

               
Cow position:
               
chr4:5460757-5461014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
156, 11
               

               
Conread position:
               
320-585
               

               
Cow position:
               
chr4:46591772-46591509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
237, 57
               

               
Conread position:
               
321-577
               

               
Cow position:
               
chr4:12903925-12903671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 56
               

               
Conread position:
               
321-577
               

               
Cow position:
               
chr4:21874906-21874669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
321-580
               

               
Cow position:
               
chr4:65650030-65650275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
236, 55
               

               
Conread position:
               
321-582
               

               
Cow position:
               
chr4:22009954-22010213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
159, 55
               

               
Conread position:
               
321-585
               

               
Cow position:
               
chr4:3341056-3340796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
321-585
               

               
Cow position:
               
chr4:48152271-48152519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
322-580
               

               
Cow position:
               
chr4:34022482-34022737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 55
               

               
Conread position:
               
322-582
               

               
Cow position:
               
chr4:53346434-53346174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
322-583
               

               
Cow position:
               
chr4:20139414-20139674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
323-453
               

               
Cow position:
               
chr4:34653768-34653894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
323-496
               

               
Cow position:
               
chr4:42176372-42176538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
323-505
               

               
Cow position:
               
chr4:61478707-61478526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
324-575
               

               
Cow position:
               
chr4:20184803-20184568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 54
               

               
Conread position:
               
324-579
               

               
Cow position:
               
chr4:48409168-48409415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 53
               

               
Conread position:
               
324-581
               

               
Cow position:
               
chr4:12049347-12049094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 53
               

               
Conread position:
               
324-582
               

               
Cow position:
               
chr4:22842447-22842195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
324-583
               

               
Cow position:
               
chr4:22344920-22345171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
324-585
               

               
Cow position:
               
chr4:7430421-7430168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
42, 38
               

               
Conread position:
               
324-585
               

               
Cow position:
               
chr4:33612261-33612514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
324-585
               

               
Cow position:
               
chr4:47348927-47348672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
324-585
               

               
Cow position:
               
chr4:54111842-54111592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
325-566
               

               
Cow position:
               
chr4:8413023-8413256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
210, 51
               

               
Conread position:
               
325-576
               

               
Cow position:
               
chr4:3283347-3283593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
325-583
               

               
Cow position:
               
chr4:44449409-44449657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
217, 52
               

               
Conread position:
               
325-585
               

               
Cow position:
               
chr4:62983462-62983705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
325-585
               

               
Cow position:
               
chr4:68889461-68889712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
155, 52
               

               
Conread position:
               
326-585
               

               
Cow position:
               
chr4:41602948-41602694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
139, 56
               

               
Conread position:
               
326-585
               

               
Cow position:
               
chr4:65179048-65179283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
327-557
               

               
Cow position:
               
chr4:39609815-39609606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 38
               

               
Conread position:
               
329-565
               

               
Cow position:
               
chr4:38952649-38952417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 48
               

               
Conread position:
               
330-585
               

               
Cow position:
               
chr4:51899101-51898852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
331-581
               

               
Cow position:
               
chr4:65919702-65919462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
333-580
               

               
Cow position:
               
chr4:17111782-17112027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
152, 42
               

               
Conread position:
               
333-585
               

               
Cow position:
               
chr4:33395606-33395849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
335-585
               

               
Cow position:
               
chr4:16601973-16602208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
335-585
               

               
Cow position:
               
chr4:21257034-21257280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
339-567
               

               
Cow position:
               
chr4:16799100-16799325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
343-585
               

               
Cow position:
               
chr4:21232792-21233029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 34
               

               
Conread position:
               
346-580
               

               
Cow position:
               
chr4:65432229-65432000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
348-585
               

               
Cow position:
               
chr4:11332174-11331937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
348-585
               

               
Cow position:
               
chr4:66111994-66112228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
132, 33
               

               
Conread position:
               
351-582
               

               
Cow position:
               
chr4:51739643-51739861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
351-583
               

               
Cow position:
               
chr4:47730932-47730705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
351-585
               

               
Cow position:
               
chr4:22741342-22741567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 55
               

               
Conread position:
               
352-510
               

               
Cow position:
               
chr4:19493628-19493472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
352-583
               

               
Cow position:
               
chr4:27632516-27632297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
353-585
               

               
Cow position:
               
chr4:46552265-46552475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
356-580
               

               
Cow position:
               
chr4:44973703-44973486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
182, 25
               

               
Conread position:
               
356-585
               

               
Cow position:
               
chr4:24744337-24744564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
358-550
               

               
Cow position:
               
chr4:67466789-67466602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
360-585
               

               
Cow position:
               
chr4:19497195-19497407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
362-585
               

               
Cow position:
               
chr4:8947458-8947238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
365-582
               

               
Cow position:
               
chr4:27540679-27540469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
366-580
               

               
Cow position:
               
chr4:24458040-24458249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
366-581
               

               
Cow position:
               
chr4:2885481-2885695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
186, 11
               

               
Conread position:
               
366-582
               

               
Cow position:
               
chr4:21371450-21371238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
189, 11
               

               
Conread position:
               
376-569
               

               
Cow position:
               
chr4:39231469-39231655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
376-580
               

               
Cow position:
               
chr4:58423748-58423965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
376-581
               

               
Cow position:
               
chr4:44956130-44956337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
376-582
               

               
Cow position:
               
chr4:17474491-17474284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 87
               

               
Conread position:
               
376-585
               

               
Cow position:
               
chr4:14470518-14470725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
376-585
               

               
Cow position:
               
chr4:19142328-19142137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
158, 85
               

               
Conread position:
               
376-585
               

               
Cow position:
               
chr4:20299326-20299119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
377-571
               

               
Cow position:
               
chr4:15635397-15635589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
377-585
               

               
Cow position:
               
chr4:13256133-13255933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
379-580
               

               
Cow position:
               
chr4:43894764-43894961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
380-530
               

               
Cow position:
               
chr4:12920317-12920171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
380-580
               

               
Cow position:
               
chr4:47047942-47047743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
380-585
               

               
Cow position:
               
chr4:285690-285493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
385-585
               

               
Cow position:
               
chr4:14964819-14964626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
388-581
               

               
Cow position:
               
chr4:35939967-35940159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
162, 73
               

               
Conread position:
               
388-585
               

               
Cow position:
               
chr4:3689744-3689553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
390-585
               

               
Cow position:
               
chr4:19463534-19463340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
394-580
               

               
Cow position:
               
chr4:17124258-17124446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
394-582
               

               
Cow position:
               
chr4:11897261-11897447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
394-582
               

               
Cow position:
               
chr4:37619854-37620040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 67
               

               
Conread position:
               
395-573
               

               
Cow position:
               
chr4:13832575-13832747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
396-581
               

               
Cow position:
               
chr4:53209269-53209086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
155, 65
               

               
Conread position:
               
396-584
               

               
Cow position:
               
chr4:21516971-21517159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
396-585
               

               
Cow position:
               
chr4:11671484-11671300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
398-585
               

               
Cow position:
               
chr4:275493-275308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
401-580
               

               
Cow position:
               
chr4:5999163-5999339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 60
               

               
Conread position:
               
402-568
               

               
Cow position:
               
chr4:26011877-26011714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
417-585
               

               
Cow position:
               
chr4:27291942-27292111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
419-584
               

               
Cow position:
               
chr4:19438474-19438306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
420-585
               

               
Cow position:
               
chr4:56435812-56435653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
423-582
               

               
Cow position:
               
chr4:480003-480157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
423-582
               

               
Cow position:
               
chr4:27687932-27687771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
423-582
               

               
Cow position:
               
chr4:36725046-36724886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
423-582
               

               
Cow position:
               
chr4:56233687-56233535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
423-583
               

               
Cow position:
               
chr4:48137917-48137757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
134, 52
               

               
Conread position:
               
423-585
               

               
Cow position:
               
chr4:33357941-33357779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
424-573
               

               
Cow position:
               
chr4:22215649-22215795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
424-582
               

               
Cow position:
               
chr4:18576766-18576925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 138
               

               
Conread position:
               
425-583
               

               
Cow position:
               
chr4:561404-561252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
439-585
               

               
Cow position:
               
chr4:43909734-43909588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 135
               

               
Conread position:
               
476-585
               

               
Cow position:
               
chr4:44072812-44072921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.