Cow genome map


           Conread name:
           rnmm10c_m20.y1
        

               Conread position:
               34-634
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 43
               

               Conread position:
               34-638
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 91
               

               Conread position:
               246-636
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 95
               

               Conread position:
               246-638
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 86
               

               Conread position:
               247-632
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               255-636
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               177, 166
               

               Conread position:
               255-638
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               65, 89
               

               Conread position:
               256-629
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               246, 11
               

               Conread position:
               256-636
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               258-636
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               219, 211
               

               Conread position:
               259-636
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 90
               

               Conread position:
               262-480
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               42, 209
               

               Conread position:
               262-636
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               263-584
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 155
               

               Conread position:
               263-633
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               239, 248
               

               Conread position:
               263-634
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 155
               

               Conread position:
               263-636
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 69
               

               Conread position:
               263-636
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 328
               

               Conread position:
               263-636
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               177, 158
               

               Conread position:
               263-638
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 252
               

               Conread position:
               263-638
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               336, 323
               

               Conread position:
               263-638
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 250
               

               Conread position:
               267-636
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 66
               

               Conread position:
               268-637
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 65
               

               Conread position:
               268-638
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               269-638
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 78
               

               Conread position:
               270-546
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               270-587
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               270-638
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 157
               

               Conread position:
               271-638
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               170, 143
               

               Conread position:
               272-637
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               273-581
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               234, 221
               

               Conread position:
               273-581
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 73
               

               Conread position:
               273-635
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               204, 191
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 61
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 70
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               327, 311
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 75
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               235, 229
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               54, 77
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               238, 229
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               234, 229
               

               Conread position:
               273-637
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               82, 66
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               208, 104
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               232, 241
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 195
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 148
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 62
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               53, 73
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               169, 164
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               62, 72
               

               Conread position:
               274-638
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               67, 61
               

               Conread position:
               275-457
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-577
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 82
               

               Conread position:
               275-585
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               227, 232
               

               Conread position:
               275-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               275-638
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               216, 239
               

               Conread position:
               275-638
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               215, 239
               

               Conread position:
               275-638
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               73, 60
               

               Conread position:
               275-638
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               276-634
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 142
               

               Conread position:
               276-636
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 57
               

               Conread position:
               278-638
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               232, 224
               

               Conread position:
               278-638
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               278-638
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               76, 57
               

               Conread position:
               278-638
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               211, 219
               

               Conread position:
               279-636
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               281-636
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               297, 317
               

               Conread position:
               281-636
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               297, 317
               

               Conread position:
               284-585
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               284-632
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               218, 227
               

               Conread position:
               284-633
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               151, 155
               

               Conread position:
               284-636
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               284-636
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               227, 218
               

               Conread position:
               284-638
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               291-582
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               291-585
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               185, 178
               

               Conread position:
               291-638
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               144, 148
               

               Conread position:
               293-636
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               347-638
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               351-638
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               154, 60
               

               Conread position:
               372-638
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               130, 139
               
Show alignments to all cow chromosomes.