Cow genome map
| Conread name: | rnmm10c_m20.y1 |
| Conread position: | 247-636 |
| Cow position: | chr17:22452173-22451783 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 247 |
| Conread position: | 247-636 |
| Cow position: | chr17:22552388-22552003 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 88, 13 |
| Conread position: | 249-638 |
| Cow position: | chr17:22552724-22552337 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 86, 21 |
| Conread position: | 256-636 |
| Cow position: | chr17:22552801-22552423 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 260 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 84, 12 |
| Conread position: | 256-638 |
| Cow position: | chr17:22552129-22551749 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 84, 12 |
| Conread position: | 257-638 |
| Cow position: | chr17:22473468-22473849 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 165, 161 |
| Conread position: | 258-488 |
| Cow position: | chr17:22473721-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 258-636 |
| Cow position: | chr17:22590303-22589925 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 162, 169 |
| Conread position: | 262-633 |
| Cow position: | chr17:22473305-22473676 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 262-638 |
| Cow position: | chr17:22498920-22498544 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 93, 73 |
| Conread position: | 263-636 |
| Cow position: | chr17:22589710-22589337 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 72, 80 |
| Conread position: | 270-638 |
| Cow position: | chr17:22589871-22589503 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 65, 95 |
| Conread position: | 273-555 |
| Cow position: | chr17:22551778-22551496 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 273-557 |
| Cow position: | chr17:22498825-22498541 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-575 |
| Cow position: | chr17:22451979-22451677 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 142, 157 |
| Conread position: | 273-624 |
| Cow position: | chr17:22499245-22498894 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 158, 148 |
| Conread position: | 273-631 |
| Cow position: | chr17:22452063-22451705 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 326, 302 |
| Conread position: | 273-636 |
| Cow position: | chr17:22452315-22451952 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 229, 238 |
| Conread position: | 273-636 |
| Cow position: | chr17:22499329-22498966 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 273-636 |
| Cow position: | chr17:22552534-22552171 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-636 |
| Cow position: | chr17:22553038-22552675 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 218, 238 |
| Conread position: | 273-637 |
| Cow position: | chr17:22590204-22589840 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 73 |
| Conread position: | 273-638 |
| Cow position: | chr17:22452399-22452034 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 235, 221 |
| Conread position: | 273-638 |
| Cow position: | chr17:22499077-22498712 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 200, 191 |
| Conread position: | 273-638 |
| Cow position: | chr17:22551862-22551497 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 143, 154 |
| Conread position: | 273-638 |
| Cow position: | chr17:22552030-22551665 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 273-638 |
| Cow position: | chr17:22552450-22552085 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 56, 81 |
| Conread position: | 273-638 |
| Cow position: | chr17:22552870-22552505 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 273-638 |
| Cow position: | chr17:22552954-22552589 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 273-638 |
| Cow position: | chr17:22590120-22589755 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 275-633 |
| Cow position: | chr17:22499159-22498801 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 275-636 |
| Cow position: | chr17:22452229-22451868 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 219 |
| Conread position: | 275-636 |
| Cow position: | chr17:22551944-22551583 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 216, 236 |
| Conread position: | 275-636 |
| Cow position: | chr17:22552196-22551835 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 225, 236 |
| Conread position: | 275-638 |
| Cow position: | chr17:22498991-22498628 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 276-583 |
| Cow position: | chr17:22473655-22473964 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 232, 226 |
| Conread position: | 276-638 |
| Cow position: | chr17:22473571-22473934 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 156, 143 |
| Conread position: | 278-638 |
| Cow position: | chr17:22473405-22473765 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 141, 145 |
| Conread position: | 278-638 |
| Cow position: | chr17:22589779-22589419 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-576 |
| Cow position: | chr17:22589526-22589229 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 293-635 |
| Cow position: | chr17:22499393-22499051 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 294, 300 |
| Conread position: | 303-638 |
| Cow position: | chr17:22473262-22473597 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 356-638 |
| Cow position: | chr17:22452400-22452118 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-638 |
| Cow position: | chr17:22499409-22499132 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 141 |
Show alignments to all cow chromosomes.