Cow genome map
| Conread name: | rnmm10c_m20.y1 |
| Conread position: | 247-480 |
| Cow position: | chr19:20635256-20635023 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 87, 94 |
| Conread position: | 247-538 |
| Cow position: | chr19:23614817-23615108 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 260, 268 |
| Conread position: | 248-636 |
| Cow position: | chr19:23613895-23614282 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 252-543 |
| Cow position: | chr19:14960011-14959722 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 261, 203 |
| Conread position: | 252-626 |
| Cow position: | chr19:14940036-14940408 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 15 |
| Conread position: | 255-554 |
| Cow position: | chr19:23597414-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 96, 86 |
| Conread position: | 255-638 |
| Cow position: | chr19:23649855-23650238 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 92, 74 |
| Conread position: | 256-636 |
| Cow position: | chr19:14940208-14940586 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 16 |
| Conread position: | 258-636 |
| Cow position: | chr19:23613820-23614198 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 88 |
| Conread position: | 258-636 |
| Cow position: | chr19:23614156-23614534 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 76, 89 |
| Conread position: | 258-636 |
| Cow position: | chr19:43570172-43569794 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 253, 244 |
| Conread position: | 258-638 |
| Cow position: | chr19:14940292-14940672 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 327 |
| Conread position: | 258-638 |
| Cow position: | chr19:20635413-20635033 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 82, 89 |
| Conread position: | 258-638 |
| Cow position: | chr19:23613568-23613948 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 337 |
| Conread position: | 258-638 |
| Cow position: | chr19:23614240-23614620 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 168 |
| Conread position: | 258-638 |
| Cow position: | chr19:43570088-43569710 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 253, 238 |
| Conread position: | 260-636 |
| Cow position: | chr19:20635663-20635287 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 360, 352 |
| Conread position: | 262-634 |
| Cow position: | chr19:14960251-14959881 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 253 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 262-636 |
| Cow position: | chr19:23613488-23613862 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 262-636 |
| Cow position: | chr19:23613992-23614366 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 84 |
| Conread position: | 263-447 |
| Cow position: | chr19:14940885-14941069 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-634 |
| Cow position: | chr19:23650115-23650486 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 263-638 |
| Cow position: | chr19:14940381-14940756 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 248 |
| Conread position: | 263-638 |
| Cow position: | chr19:23613657-23614032 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 231 |
| Conread position: | 263-638 |
| Cow position: | chr19:23614581-23614956 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-638 |
| Cow position: | chr19:23649947-23650322 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-538 |
| Cow position: | chr19:14948321-14948051 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 208, 201 |
| Conread position: | 268-549 |
| Cow position: | chr19:14959591-14959310 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-637 |
| Cow position: | chr19:43570246-43569878 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 164, 154 |
| Conread position: | 269-635 |
| Cow position: | chr19:14960078-14959714 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 235, 242 |
| Conread position: | 273-551 |
| Cow position: | chr19:14959097-14958819 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-585 |
| Cow position: | chr19:14959175-14958869 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 206, 58 |
| Conread position: | 273-622 |
| Cow position: | chr19:23614759-23615108 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 145, 154 |
| Conread position: | 273-636 |
| Cow position: | chr19:14940559-14940922 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 206, 213 |
| Conread position: | 273-636 |
| Cow position: | chr19:14948483-14948121 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 204, 84 |
| Conread position: | 273-636 |
| Cow position: | chr19:14960408-14960047 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 241 |
| Conread position: | 273-636 |
| Cow position: | chr19:20635482-20635119 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 314, 327 |
| Conread position: | 273-636 |
| Cow position: | chr19:23614339-23614702 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 73 |
| Conread position: | 273-636 |
| Cow position: | chr19:23649453-23649816 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 204, 196 |
| Conread position: | 273-638 |
| Cow position: | chr19:14960324-14959961 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 273-638 |
| Cow position: | chr19:23597264-23597629 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 168, 162 |
| Conread position: | 273-638 |
| Cow position: | chr19:23597348-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 326, 313 |
| Conread position: | 273-638 |
| Cow position: | chr19:23613415-23613780 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 229, 235 |
| Conread position: | 273-638 |
| Cow position: | chr19:23613751-23614116 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 273-638 |
| Cow position: | chr19:23614675-23615040 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 146, 151 |
| Conread position: | 273-638 |
| Cow position: | chr19:23650041-23650406 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 275-486 |
| Cow position: | chr19:14940813-14941024 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 275-586 |
| Cow position: | chr19:14948398-14948087 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 202, 194 |
| Conread position: | 275-636 |
| Cow position: | chr19:14940477-14940838 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 275-636 |
| Cow position: | chr19:23596933-23597291 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 250, 102 |
| Conread position: | 275-637 |
| Cow position: | chr19:14959500-14959147 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 162, 144 |
| Conread position: | 275-638 |
| Cow position: | chr19:14959257-14958900 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 275-638 |
| Cow position: | chr19:23596849-23597209 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 275-638 |
| Cow position: | chr19:23614425-23614788 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 275-638 |
| Cow position: | chr19:23649623-23649986 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 207, 221 |
| Conread position: | 276-585 |
| Cow position: | chr19:14940730-14941039 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 277-584 |
| Cow position: | chr19:20678442-20678746 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 277-636 |
| Cow position: | chr19:14940143-14940502 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 309 |
| Conread position: | 277-636 |
| Cow position: | chr19:20677518-20677877 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 277-636 |
| Cow position: | chr19:20678022-20678381 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 309, 316 |
| Conread position: | 277-638 |
| Cow position: | chr19:20678190-20678551 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 278-583 |
| Cow position: | chr19:20678359-20678664 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 220 |
| Conread position: | 278-585 |
| Cow position: | chr19:20677855-20678162 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 278-585 |
| Cow position: | chr19:20677939-20678246 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 73, 62 |
| Conread position: | 278-636 |
| Cow position: | chr19:14940648-14941006 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 278-638 |
| Cow position: | chr19:20677687-20678047 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 57, 69 |
| Conread position: | 278-638 |
| Cow position: | chr19:20678275-20678635 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 281-636 |
| Cow position: | chr19:23597188-23597543 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 283-567 |
| Cow position: | chr19:20635304-20635020 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 284-638 |
| Cow position: | chr19:20635555-20635201 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-638 |
| Cow position: | chr19:23613345-23613696 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-638 |
| Cow position: | chr19:43570464-43570128 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 291-636 |
| Cow position: | chr19:14939989-14940334 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 140, 129 |
| Conread position: | 291-638 |
| Cow position: | chr19:23649303-23649650 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 292-636 |
| Cow position: | chr19:23649388-23649732 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 185, 177 |
| Conread position: | 305-638 |
| Cow position: | chr19:20677630-20677963 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 345-638 |
| Cow position: | chr19:14960420-14960129 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 250, 241 |
| Conread position: | 355-638 |
| Cow position: | chr19:14948485-14948203 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 129, 81 |
| Conread position: | 359-636 |
| Cow position: | chr19:14939973-14940250 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-638 |
| Cow position: | chr19:20635646-20635369 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 141, 150 |
| Conread position: | 374-636 |
| Cow position: | chr19:14960475-14960213 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 226, 212 |
Show alignments to all cow chromosomes.