Cow genome map


           Conread name:
           rnmm10c_m20.y1
        

               Conread position:
               247-480
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               87, 94
               

               Conread position:
               247-538
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               260, 268
               

               Conread position:
               248-636
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 8
               

               Conread position:
               252-543
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               261, 203
               

               Conread position:
               252-626
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 15
               

               Conread position:
               255-554
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               96, 86
               

               Conread position:
               255-638
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               92, 74
               

               Conread position:
               256-636
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               320, 16
               

               Conread position:
               258-636
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 88
               

               Conread position:
               258-636
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               76, 89
               

               Conread position:
               258-636
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               247
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               253, 244
               

               Conread position:
               258-638
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 327
               

               Conread position:
               258-638
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               82, 89
               

               Conread position:
               258-638
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 337
               

               Conread position:
               258-638
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 168
               

               Conread position:
               258-638
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               253, 238
               

               Conread position:
               260-636
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               360, 352
               

               Conread position:
               262-634
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               66, 86
               

               Conread position:
               262-636
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 85
               

               Conread position:
               262-636
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 84
               

               Conread position:
               263-447
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               263-634
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               263-638
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 248
               

               Conread position:
               263-638
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 231
               

               Conread position:
               263-638
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               263-638
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               268-538
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               208, 201
               

               Conread position:
               268-549
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               268-637
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               164, 154
               

               Conread position:
               269-635
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               243
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               235, 242
               

               Conread position:
               273-551
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-585
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               206, 58
               

               Conread position:
               273-622
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               145, 154
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               206, 213
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               204, 84
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 241
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               314, 327
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 73
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               204, 196
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               249
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               168, 162
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               326, 313
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               229, 235
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 71
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               146, 151
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-486
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-586
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               202, 194
               

               Conread position:
               275-636
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               275-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               250, 102
               

               Conread position:
               275-637
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               162, 144
               

               Conread position:
               275-638
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               275-638
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               275-638
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-638
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               207, 221
               

               Conread position:
               276-585
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-584
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               277-636
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 309
               

               Conread position:
               277-636
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               59, 67
               

               Conread position:
               277-636
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               309, 316
               

               Conread position:
               277-638
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 70
               

               Conread position:
               278-583
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 220
               

               Conread position:
               278-585
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               59, 68
               

               Conread position:
               278-585
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               73, 62
               

               Conread position:
               278-636
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               278-638
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               278-638
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               281-636
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               53, 66
               

               Conread position:
               283-567
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               284-638
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               287-638
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-638
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               291-636
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               140, 129
               

               Conread position:
               291-638
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               292-636
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               185, 177
               

               Conread position:
               305-638
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               31, 43
               

               Conread position:
               345-638
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               250, 241
               

               Conread position:
               355-638
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               129, 81
               

               Conread position:
               359-636
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               361-638
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               141, 150
               

               Conread position:
               374-636
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               226, 212
               
Show alignments to all cow chromosomes.