Cow genome map


           Conread name:
           rnmm10c_m20.y1
        

               Conread position:
               209-638
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               284
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               251-635
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               49, 19
               

               Conread position:
               251-638
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               133, 253
               

               Conread position:
               251-638
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 95
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 15
               

               Conread position:
               254-636
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 33
               

               Conread position:
               254-636
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               230, 16
               

               Conread position:
               254-638
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 94
               

               Conread position:
               255-636
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 247
               

               Conread position:
               255-638
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               347, 330
               

               Conread position:
               256-469
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               79, 88
               

               Conread position:
               258-636
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               178, 183
               

               Conread position:
               258-636
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               82, 88
               

               Conread position:
               259-636
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               341, 321
               

               Conread position:
               259-638
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               259-638
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               231, 237
               

               Conread position:
               262-634
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 252
               

               Conread position:
               262-636
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               87, 71
               

               Conread position:
               262-636
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               98, 74
               

               Conread position:
               262-638
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               74, 83
               

               Conread position:
               263-586
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               263-630
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               237, 244
               

               Conread position:
               263-636
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               263-638
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 337
               

               Conread position:
               265-638
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               6, 84
               

               Conread position:
               267-546
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               77, 66
               

               Conread position:
               268-637
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               164, 151
               

               Conread position:
               268-638
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               88, 65
               

               Conread position:
               270-625
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               172, 152
               

               Conread position:
               272-581
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               303, 0
               

               Conread position:
               273-582
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               76, 59
               

               Conread position:
               273-583
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               227, 238
               

               Conread position:
               273-583
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               159, 145
               

               Conread position:
               273-633
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               273-634
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               76, 63
               

               Conread position:
               273-634
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               65, 61
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               324, 313
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               75, 63
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 312
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               169, 163
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               164, 147
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               250, 230
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               204, 196
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               235, 225
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               218, 238
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 314
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 241
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               235, 229
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               174, 170
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               78, 63
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               204, 195
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               327, 311
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 225
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 242
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               204, 185
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               236, 222
               

               Conread position:
               275-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               60, 73
               

               Conread position:
               275-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               167, 160
               

               Conread position:
               275-636
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               323, 311
               

               Conread position:
               275-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               244
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               202, 194
               

               Conread position:
               276-634
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               240, 217
               

               Conread position:
               277-576
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               76, 69
               

               Conread position:
               277-582
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               155, 141
               

               Conread position:
               277-638
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               278-585
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 68
               

               Conread position:
               278-636
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               316, 309
               

               Conread position:
               279-585
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               209, 217
               

               Conread position:
               279-634
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               279-636
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               74, 55
               

               Conread position:
               284-636
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 65
               

               Conread position:
               291-582
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               296-630
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               356-585
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               135, 142
               

               Conread position:
               356-636
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               222, 234
               

               Conread position:
               356-636
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               356-636
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               371-636
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               390-636
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               68, 0
               
Show alignments to all cow chromosomes.