Cow genome map

Conread name: rnmm10c_m20.y1

Conread position: 209-638
Cow position: chr22:12458691-12458262 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 284
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 29, 50

Conread position: 251-635
Cow position: chr22:12385455-12385071 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 253
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 19

Conread position: 251-638
Cow position: chr22:12385541-12385152 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 246
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 133, 253

Conread position: 251-638
Cow position: chr22:12399465-12399078 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 95

Conread position: 252-638
Cow position: chr22:12399546-12399162 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 15

Conread position: 254-636
Cow position: chr22:12399876-12399500 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 33

Conread position: 254-636
Cow position: chr22:12419248-12418851 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 230, 16

Conread position: 254-638
Cow position: chr22:12432366-12431982 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 243
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 94

Conread position: 255-636
Cow position: chr22:12399797-12399416 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 247

Conread position: 255-638
Cow position: chr22:12399293-12398910 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 330

Conread position: 256-469
Cow position: chr22:12398956-12398743 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 79, 88

Conread position: 258-636
Cow position: chr22:12385364-12384986 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 246
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 178, 183

Conread position: 258-636
Cow position: chr22:12385618-12385238 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 253
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 88

Conread position: 259-636
Cow position: chr22:12499425-12499802 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 245
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 341, 321

Conread position: 259-638
Cow position: chr22:12475834-12475455 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 259-638
Cow position: chr22:12499593-12499972 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 256
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 231, 237

Conread position: 262-634
Cow position: chr22:12431014-12430642 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 252

Conread position: 262-636
Cow position: chr22:12458218-12457844 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 246
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 71

Conread position: 262-636
Cow position: chr22:14429868-14430242 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 237
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 98, 74

Conread position: 262-638
Cow position: chr22:12418889-12418513 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 243
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 74, 83

Conread position: 263-586
Cow position: chr22:12399117-12398794 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 65, 85

Conread position: 263-630
Cow position: chr22:12385275-12384908 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 231
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 237, 244

Conread position: 263-636
Cow position: chr22:11640661-11641034 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 239
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 25

Conread position: 263-638
Cow position: chr22:12458385-12458010 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 337

Conread position: 265-638
Cow position: chr22:12431852-12431478 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 6, 84

Conread position: 267-546
Cow position: chr22:12399029-12398750 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 77, 66

Conread position: 268-637
Cow position: chr22:11641086-11641455 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 240
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 164, 151

Conread position: 268-638
Cow position: chr22:12432016-12431646 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 239
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 88, 65

Conread position: 270-625
Cow position: chr22:12430922-12430567 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 227
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 172, 152

Conread position: 272-581
Cow position: chr22:46654497-46654807 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 303, 0

Conread position: 273-582
Cow position: chr22:11666596-11666905 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 201
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 76, 59

Conread position: 273-583
Cow position: chr22:12432431-12432121 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 227, 238

Conread position: 273-583
Cow position: chr22:14467956-14468266 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 203
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 159, 145

Conread position: 273-633
Cow position: chr22:11701334-11701694 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 84

Conread position: 273-634
Cow position: chr22:12458123-12457762 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 76, 63

Conread position: 273-634
Cow position: chr22:46654330-46654691 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 219
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 75

Conread position: 273-636
Cow position: chr22:11640923-11641286 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 65, 61

Conread position: 273-636
Cow position: chr22:11641007-11641370 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 234
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 324, 313

Conread position: 273-636
Cow position: chr22:12399191-12398828 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 273-636
Cow position: chr22:12431087-12430724 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 75, 63

Conread position: 273-636
Cow position: chr22:12431171-12430808 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 312

Conread position: 273-636
Cow position: chr22:12431255-12430892 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 169, 163

Conread position: 273-636
Cow position: chr22:12431591-12431228 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 164, 147

Conread position: 273-636
Cow position: chr22:12431675-12431312 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 234
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 250, 230

Conread position: 273-636
Cow position: chr22:12458459-12458096 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 204, 196

Conread position: 273-636
Cow position: chr22:12475904-12475541 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 235, 225

Conread position: 273-636
Cow position: chr22:12475988-12475625 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 218, 238

Conread position: 273-636
Cow position: chr22:12476324-12475961 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 314

Conread position: 273-636
Cow position: chr22:12476408-12476045 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 229
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 273-636
Cow position: chr22:12498851-12499214 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 234
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 273-636
Cow position: chr22:12498935-12499298 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 241

Conread position: 273-636
Cow position: chr22:12499355-12499718 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 235, 229

Conread position: 273-636
Cow position: chr22:46654078-46654441 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 226
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 174, 170

Conread position: 273-638
Cow position: chr22:11701250-11701615 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 63

Conread position: 273-638
Cow position: chr22:12385687-12385320 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 239
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 17, 22

Conread position: 273-638
Cow position: chr22:12431339-12430974 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 204, 195

Conread position: 273-638
Cow position: chr22:12431759-12431394 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 327, 311

Conread position: 273-638
Cow position: chr22:12475652-12475287 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 225

Conread position: 273-638
Cow position: chr22:12475736-12475371 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 242

Conread position: 273-638
Cow position: chr22:12499271-12499636 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 204, 185

Conread position: 273-638
Cow position: chr22:12499523-12499888 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 275-636
Cow position: chr22:12399609-12399248 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 236, 222

Conread position: 275-636
Cow position: chr22:12418960-12418599 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 60, 73

Conread position: 275-636
Cow position: chr22:12432093-12431732 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 231
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 167, 160

Conread position: 275-636
Cow position: chr22:12476070-12475709 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 230
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 323, 311

Conread position: 275-636
Cow position: chr22:12476154-12475793 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 202, 194

Conread position: 276-634
Cow position: chr22:12431504-12431146 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 240, 217

Conread position: 277-576
Cow position: chr22:14468044-14468343 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 76, 69

Conread position: 277-582
Cow position: chr22:14430135-14430440 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 190
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 155, 141

Conread position: 277-638
Cow position: chr22:14430555-14430916 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 225
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 62

Conread position: 278-585
Cow position: chr22:14429800-14430107 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 68

Conread position: 278-636
Cow position: chr22:12476235-12475877 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 316, 309

Conread position: 279-585
Cow position: chr22:14468214-14468520 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 209, 217

Conread position: 279-634
Cow position: chr22:12458537-12458183 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 76, 65

Conread position: 279-636
Cow position: chr22:14430473-14430830 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 224
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 55

Conread position: 284-636
Cow position: chr22:14430058-14430410 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 216
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 65

Conread position: 291-582
Cow position: chr22:14430317-14430608 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 186
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 71, 49

Conread position: 296-630
Cow position: chr22:12419023-12418689 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 356-585
Cow position: chr22:14467955-14468184 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 142

Conread position: 356-636
Cow position: chr22:12432432-12432152 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 222, 234

Conread position: 356-636
Cow position: chr22:12476409-12476129 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 356-636
Cow position: chr22:12498850-12499130 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 371-636
Cow position: chr22:14429641-14429906 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 390-636
Cow position: chr22:12399908-12399668 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 0

Show alignments to all cow chromosomes.