Cow genome map


           Conread name:
           rnmm10c_m20.y1
        

               Conread position:
               199-636
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 70
               

               Conread position:
               247-581
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               88, 97
               

               Conread position:
               252-453
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               252-469
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               253-638
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 249
               

               Conread position:
               258-638
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 253
               

               Conread position:
               258-638
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 236
               

               Conread position:
               258-638
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               77, 95
               

               Conread position:
               262-585
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               71, 83
               

               Conread position:
               263-623
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               262, 231
               

               Conread position:
               263-638
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 239
               

               Conread position:
               268-633
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               209, 201
               

               Conread position:
               268-638
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               243
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               179, 175
               

               Conread position:
               269-638
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 315
               

               Conread position:
               272-636
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               273-420
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               69, 74
               

               Conread position:
               273-530
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-537
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-582
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               158, 141
               

               Conread position:
               273-584
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               158, 147
               

               Conread position:
               273-634
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 221
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 238
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 75
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 229
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               100, 108
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               273-636
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               90, 64
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               245
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               168, 71
               

               Conread position:
               273-638
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               182, 190
               

               Conread position:
               275-554
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               233, 219
               

               Conread position:
               275-636
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-638
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               277-539
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               230, 214
               

               Conread position:
               277-585
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               225, 238
               

               Conread position:
               277-638
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               70, 55
               

               Conread position:
               277-638
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               231, 217
               

               Conread position:
               278-635
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-583
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               284-638
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 214
               

               Conread position:
               286-638
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 225
               

               Conread position:
               290-638
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               183, 172
               

               Conread position:
               292-636
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               142, 128
               

               Conread position:
               301-638
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               207, 193
               

               Conread position:
               314-636
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               104, 127
               

               Conread position:
               347-638
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               94, 88
               

               Conread position:
               347-638
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 77
               

               Conread position:
               377-638
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               131, 125
               

               Conread position:
               398-638
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               125, 120
               
Show alignments to all cow chromosomes.