Cow genome map
| Conread name: | rnmm10c_m20.y1 |
| Conread position: | 247-550 |
| Cow position: | chr25:34769498-34769195 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 247-636 |
| Cow position: | chr25:34769918-34769529 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 264 |
| Conread position: | 252-636 |
| Cow position: | chr25:34769829-34769445 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 86 |
| Conread position: | 252-638 |
| Cow position: | chr25:33127847-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 348, 18 |
| Conread position: | 255-638 |
| Cow position: | chr25:33157259-33156876 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 87, 93 |
| Conread position: | 255-638 |
| Cow position: | chr25:34769994-34769611 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 256 |
| Conread position: | 256-480 |
| Cow position: | chr25:33157004-33156783 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 256-578 |
| Cow position: | chr25:23420598-23420923 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 293, 0 |
| Conread position: | 258-585 |
| Cow position: | chr25:23420516-23420843 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 258-585 |
| Cow position: | chr25:34714167-34714494 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 89 |
| Conread position: | 258-636 |
| Cow position: | chr25:23420348-23420726 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 341, 326 |
| Conread position: | 258-636 |
| Cow position: | chr25:34433654-34434029 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 114, 105 |
| Conread position: | 258-638 |
| Cow position: | chr25:33299116-33299496 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 242, 249 |
| Conread position: | 258-638 |
| Cow position: | chr25:34446987-34447367 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 226, 202 |
| Conread position: | 258-638 |
| Cow position: | chr25:34770075-34769695 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 254 |
| Conread position: | 262-632 |
| Cow position: | chr25:34447075-34447445 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 240, 249 |
| Conread position: | 263-638 |
| Cow position: | chr25:33157335-33156960 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 263, 250 |
| Conread position: | 263-638 |
| Cow position: | chr25:34769650-34769275 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 214, 206 |
| Conread position: | 265-634 |
| Cow position: | chr25:34447245-34447615 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 9, 194 |
| Conread position: | 266-638 |
| Cow position: | chr25:33305427-33305062 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 267-582 |
| Cow position: | chr25:33305826-33305513 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 7, 81 |
| Conread position: | 268-638 |
| Cow position: | chr25:33157414-33157044 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 244 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 319, 331 |
| Conread position: | 270-638 |
| Cow position: | chr25:36800776-36801144 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 273-537 |
| Cow position: | chr25:36801691-36801955 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 273-573 |
| Cow position: | chr25:34447506-34447799 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 273-576 |
| Cow position: | chr25:33299467-33299770 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 273-576 |
| Cow position: | chr25:36800695-36800998 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 227, 237 |
| Conread position: | 273-582 |
| Cow position: | chr25:33305255-33304949 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 273-634 |
| Cow position: | chr25:23420447-23420808 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 216, 237 |
| Conread position: | 273-636 |
| Cow position: | chr25:33157493-33157130 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 54, 73 |
| Conread position: | 273-636 |
| Cow position: | chr25:33299299-33299662 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 75 |
| Conread position: | 273-636 |
| Cow position: | chr25:34447338-34447701 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-636 |
| Cow position: | chr25:34769724-34769361 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 229 |
| Conread position: | 273-638 |
| Cow position: | chr25:33127782-33128147 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 229, 238 |
| Conread position: | 273-638 |
| Cow position: | chr25:33298711-33299076 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 69 |
| Conread position: | 273-638 |
| Cow position: | chr25:34714098-34714463 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 273-638 |
| Cow position: | chr25:34770144-34769779 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 275-573 |
| Cow position: | chr25:22235979-22236277 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 202, 194 |
| Conread position: | 275-576 |
| Cow position: | chr25:33145080-33145381 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 81, 63 |
| Conread position: | 275-576 |
| Cow position: | chr25:33298881-33299182 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 275-577 |
| Cow position: | chr25:33298965-33299267 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 275-636 |
| Cow position: | chr25:33157155-33156794 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 275-638 |
| Cow position: | chr25:33298629-33298992 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 275-638 |
| Cow position: | chr25:33298797-33299160 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 225, 241 |
| Conread position: | 275-638 |
| Cow position: | chr25:33299049-33299412 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 275-638 |
| Cow position: | chr25:33299217-33299580 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 277-636 |
| Cow position: | chr25:33144917-33145273 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 102, 95 |
| Conread position: | 277-636 |
| Cow position: | chr25:33299387-33299746 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 279-547 |
| Cow position: | chr25:33145168-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 228, 235 |
| Conread position: | 288-638 |
| Cow position: | chr25:33298473-33298824 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 290-635 |
| Cow position: | chr25:326919-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 6, 301 |
| Conread position: | 291-636 |
| Cow position: | chr25:33144847-33145189 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 171, 164 |
| Conread position: | 292-576 |
| Cow position: | chr25:366724-367008 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-585 |
| Cow position: | chr25:34732105-34731812 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 212, 219 |
| Conread position: | 292-636 |
| Cow position: | chr25:36801542-36801886 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 219, 214 |
| Conread position: | 295-638 |
| Cow position: | chr25:33298565-33298908 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 308-638 |
| Cow position: | chr25:33157542-33157212 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 344-572 |
| Cow position: | chr25:34432987-34433215 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 164, 145 |
| Conread position: | 347-638 |
| Cow position: | chr25:33127772-33128063 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 356-638 |
| Cow position: | chr25:34770145-34769863 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 391-638 |
| Cow position: | chr25:33127732-33127979 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 132, 127 |
| Conread position: | 426-638 |
| Cow position: | chr25:34432985-34433197 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 47, 42 |
Show alignments to all cow chromosomes.