Cow genome map
| Conread name: | rnmm10c_m20.y1 |
| Conread position: | 234-638 |
| Cow position: | chr28:9252964-9253364 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 268 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 106, 5 |
| Conread position: | 245-576 |
| Cow position: | chr28:9290040-9290367 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 258-537 |
| Cow position: | chr28:9253320-9253599 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 250, 244 |
| Conread position: | 260-420 |
| Cow position: | chr28:9290469-9290629 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 86 |
| Conread position: | 261-636 |
| Cow position: | chr28:11334169-11333794 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 145, 174 |
| Conread position: | 262-636 |
| Cow position: | chr28:9299120-9299480 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 236, 65 |
| Conread position: | 262-636 |
| Cow position: | chr28:11333916-11333542 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 228, 246 |
| Conread position: | 262-638 |
| Cow position: | chr28:7757889-7758265 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 82 |
| Conread position: | 263-634 |
| Cow position: | chr28:7758462-7758832 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 161, 148 |
| Conread position: | 263-638 |
| Cow position: | chr28:7810561-7810936 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 169, 160 |
| Conread position: | 263-638 |
| Cow position: | chr28:34679588-34679212 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 267-576 |
| Cow position: | chr28:9298875-9299182 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 244, 119 |
| Conread position: | 267-638 |
| Cow position: | chr28:9253077-9253448 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 244 |
| Conread position: | 273-540 |
| Cow position: | chr28:7758068-7758335 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 273-582 |
| Cow position: | chr28:9299369-9299675 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 83, 68 |
| Conread position: | 273-584 |
| Cow position: | chr28:11333821-11333510 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 133, 141 |
| Conread position: | 273-585 |
| Cow position: | chr28:34679496-34679181 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 273-621 |
| Cow position: | chr28:7757984-7758332 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 164, 149 |
| Conread position: | 273-634 |
| Cow position: | chr28:9253251-9253612 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 235, 221 |
| Conread position: | 273-636 |
| Cow position: | chr28:7758388-7758751 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 273-636 |
| Cow position: | chr28:7810328-7810682 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 273-638 |
| Cow position: | chr28:7757564-7757929 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 273-638 |
| Cow position: | chr28:7757732-7758097 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 240 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 216, 238 |
| Conread position: | 273-638 |
| Cow position: | chr28:7757816-7758181 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 216, 238 |
| Conread position: | 273-638 |
| Cow position: | chr28:9253167-9253532 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 73 |
| Conread position: | 273-638 |
| Cow position: | chr28:9290316-9290679 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 168, 59 |
| Conread position: | 273-638 |
| Cow position: | chr28:34673419-34673784 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 84, 65 |
| Conread position: | 274-564 |
| Cow position: | chr28:7810656-7810946 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 274-638 |
| Cow position: | chr28:7757397-7757761 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 215, 237 |
| Conread position: | 275-585 |
| Cow position: | chr28:34696230-34696540 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 227, 241 |
| Conread position: | 275-636 |
| Cow position: | chr28:7757650-7758011 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 54, 69 |
| Conread position: | 275-638 |
| Cow position: | chr28:7810255-7810600 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 132, 52 |
| Conread position: | 275-638 |
| Cow position: | chr28:34696146-34696509 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 69 |
| Conread position: | 290-638 |
| Cow position: | chr28:34673352-34673700 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 287, 308 |
| Conread position: | 293-635 |
| Cow position: | chr28:9299221-9299563 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 314-638 |
| Cow position: | chr28:7810528-7810852 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 197, 180 |
| Conread position: | 377-633 |
| Cow position: | chr28:7758324-7758580 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 134, 117 |
Show alignments to all cow chromosomes.