Cow genome map
| Conread name: | rnmm10c_m20.y1 |
| Conread position: | 247-638 |
| Cow position: | chr7:1015061-1015452 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 331 |
| Conread position: | 248-539 |
| Cow position: | chr7:11600728-11600437 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 185, 170 |
| Conread position: | 248-584 |
| Cow position: | chr7:8324856-8325192 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 109, 97 |
| Conread position: | 251-634 |
| Cow position: | chr7:42878644-42878263 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 254, 16 |
| Conread position: | 252-549 |
| Cow position: | chr7:3180580-3180876 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 233, 218 |
| Conread position: | 252-638 |
| Cow position: | chr7:3180328-3180714 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 80, 92 |
| Conread position: | 255-636 |
| Cow position: | chr7:3180079-3180460 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 255-636 |
| Cow position: | chr7:18390292-18390673 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 80, 93 |
| Conread position: | 255-638 |
| Cow position: | chr7:1014733-1015116 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 260, 239 |
| Conread position: | 257-636 |
| Cow position: | chr7:3179913-3180292 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 258-583 |
| Cow position: | chr7:1438382-1438707 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 22 |
| Conread position: | 258-636 |
| Cow position: | chr7:1014406-1014778 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 165, 159 |
| Conread position: | 258-636 |
| Cow position: | chr7:3180250-3180628 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 250, 236 |
| Conread position: | 258-636 |
| Cow position: | chr7:42879059-42878681 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 231, 253 |
| Conread position: | 258-638 |
| Cow position: | chr7:3179998-3180378 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 175 |
| Conread position: | 258-638 |
| Cow position: | chr7:18390379-18390759 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 244, 253 |
| Conread position: | 259-636 |
| Cow position: | chr7:42879310-42878933 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 76, 86 |
| Conread position: | 260-636 |
| Cow position: | chr7:1014822-1015198 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 159, 172 |
| Conread position: | 260-638 |
| Cow position: | chr7:8243018-8243395 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 158, 172 |
| Conread position: | 260-638 |
| Cow position: | chr7:11600968-11600590 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 327, 340 |
| Conread position: | 263-636 |
| Cow position: | chr7:1014657-1015030 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 75, 71 |
| Conread position: | 263-636 |
| Cow position: | chr7:11601133-11600760 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 241, 234 |
| Conread position: | 263-638 |
| Cow position: | chr7:11601049-11600674 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 161, 156 |
| Conread position: | 273-492 |
| Cow position: | chr7:8325889-8326108 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 69, 74 |
| Conread position: | 273-582 |
| Cow position: | chr7:8325805-8326114 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 68 |
| Conread position: | 273-583 |
| Cow position: | chr7:1439955-1440264 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 273-583 |
| Cow position: | chr7:8325385-8325695 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 79, 61 |
| Conread position: | 273-634 |
| Cow position: | chr7:1439534-1439896 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 273-636 |
| Cow position: | chr7:3179761-3180124 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-636 |
| Cow position: | chr7:8242863-8243226 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 313, 326 |
| Conread position: | 273-636 |
| Cow position: | chr7:8277408-8277771 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 162, 145 |
| Conread position: | 273-636 |
| Cow position: | chr7:8324797-8325160 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 168, 153 |
| Conread position: | 273-636 |
| Cow position: | chr7:8325637-8326000 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 75, 60 |
| Conread position: | 273-636 |
| Cow position: | chr7:42878792-42878429 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 62, 73 |
| Conread position: | 273-636 |
| Cow position: | chr7:42878876-42878513 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 157, 146 |
| Conread position: | 273-638 |
| Cow position: | chr7:1014919-1015284 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 74 |
| Conread position: | 273-638 |
| Cow position: | chr7:1015003-1015368 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 314 |
| Conread position: | 273-638 |
| Cow position: | chr7:1439788-1440151 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 273-638 |
| Cow position: | chr7:8243450-8243815 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 80, 67 |
| Conread position: | 273-638 |
| Cow position: | chr7:8243702-8244065 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 299, 0 |
| Conread position: | 273-638 |
| Cow position: | chr7:8277576-8277941 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 304, 326 |
| Conread position: | 273-638 |
| Cow position: | chr7:8277744-8278109 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 243, 221 |
| Conread position: | 273-638 |
| Cow position: | chr7:8324965-8325330 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 80, 67 |
| Conread position: | 273-638 |
| Cow position: | chr7:8325553-8325918 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 163, 144 |
| Conread position: | 273-638 |
| Cow position: | chr7:18390058-18390423 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-638 |
| Cow position: | chr7:18390226-18390591 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 69, 74 |
| Conread position: | 273-638 |
| Cow position: | chr7:42878960-42878595 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 273-638 |
| Cow position: | chr7:42879128-42878763 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 75 |
| Conread position: | 273-638 |
| Cow position: | chr7:42879212-42878847 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 238 |
| Conread position: | 275-636 |
| Cow position: | chr7:3180183-3180544 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 223 |
| Conread position: | 275-638 |
| Cow position: | chr7:42878706-42878343 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 276-633 |
| Cow position: | chr7:11601204-11600847 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 276-638 |
| Cow position: | chr7:11600868-11600506 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 277-638 |
| Cow position: | chr7:8325221-8325582 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 78, 57 |
| Conread position: | 278-579 |
| Cow position: | chr7:8278001-8278302 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 67 |
| Conread position: | 278-635 |
| Cow position: | chr7:3180438-3180795 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 306 |
| Conread position: | 278-638 |
| Cow position: | chr7:8325306-8325666 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 280-636 |
| Cow position: | chr7:1014512-1014862 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 281-634 |
| Cow position: | chr7:3180525-3180877 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 227, 213 |
| Conread position: | 284-635 |
| Cow position: | chr7:8325732-8326083 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 303, 323 |
| Conread position: | 286-636 |
| Cow position: | chr7:8243379-8243729 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 288-584 |
| Cow position: | chr7:8277255-8277551 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 152, 142 |
| Conread position: | 288-638 |
| Cow position: | chr7:8324728-8325078 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 231, 222 |
| Conread position: | 293-638 |
| Cow position: | chr7:18390162-18390507 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 305, 291 |
| Conread position: | 302-587 |
| Cow position: | chr7:8277521-8277806 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 351-638 |
| Cow position: | chr7:11601213-11600926 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 68, 76 |
| Conread position: | 354-585 |
| Cow position: | chr7:11434510-11434279 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 119, 110 |
| Conread position: | 356-638 |
| Cow position: | chr7:3179760-3180042 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 120, 113 |
| Conread position: | 357-585 |
| Cow position: | chr7:8243870-8244095 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 160, 112 |
| Conread position: | 392-638 |
| Cow position: | chr7:3179712-3179958 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 97, 106 |
Show alignments to all cow chromosomes.