Cow genome map
| Conread name: | rnmm10c_m20.y1 |
| Conread position: | 248-556 |
| Cow position: | chr8:48407087-48406779 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 255-638 |
| Cow position: | chr8:55581204-55581587 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 222, 214 |
| Conread position: | 258-636 |
| Cow position: | chr8:45200815-45201193 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 258-636 |
| Cow position: | chr8:55581123-55581501 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-636 |
| Cow position: | chr8:48406737-48406363 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 263-638 |
| Cow position: | chr8:46816267-46816642 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 155, 162 |
| Conread position: | 263-638 |
| Cow position: | chr8:46816771-46817146 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 78 |
| Conread position: | 263-638 |
| Cow position: | chr8:48406904-48406529 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 137, 160 |
| Conread position: | 270-626 |
| Cow position: | chr8:46817030-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 206, 199 |
| Conread position: | 270-635 |
| Cow position: | chr8:46816610-46816975 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 270-638 |
| Cow position: | chr8:46816106-46816474 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 75 |
| Conread position: | 273-582 |
| Cow position: | chr8:55581390-55581699 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 249, 240 |
| Conread position: | 273-585 |
| Cow position: | chr8:45201586-45201898 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 218, 238 |
| Conread position: | 273-585 |
| Cow position: | chr8:45201670-45201982 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-585 |
| Cow position: | chr8:55581306-55581618 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 273-633 |
| Cow position: | chr8:48407146-48406786 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 237, 241 |
| Conread position: | 273-634 |
| Cow position: | chr8:48406642-48406281 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 334, 319 |
| Conread position: | 273-635 |
| Cow position: | chr8:46816193-46816555 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 230, 238 |
| Conread position: | 273-636 |
| Cow position: | chr8:46816697-46817060 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-636 |
| Cow position: | chr8:48407314-48406951 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 273-636 |
| Cow position: | chr8:48407398-48407035 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-637 |
| Cow position: | chr8:48407230-48406866 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 273-637 |
| Cow position: | chr8:48407482-48407118 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 273-638 |
| Cow position: | chr8:45201082-45201447 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 167, 138 |
| Conread position: | 273-638 |
| Cow position: | chr8:45201166-45201531 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 61 |
| Conread position: | 273-638 |
| Cow position: | chr8:45201334-45201699 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 238 |
| Conread position: | 273-638 |
| Cow position: | chr8:45201418-45201783 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 311 |
| Conread position: | 273-638 |
| Cow position: | chr8:45201502-45201867 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 73 |
| Conread position: | 273-638 |
| Cow position: | chr8:46816445-46816810 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 273-638 |
| Cow position: | chr8:46816529-46816894 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 273-638 |
| Cow position: | chr8:48407566-48407201 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 229, 243 |
| Conread position: | 273-638 |
| Cow position: | chr8:55581054-55581419 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 329, 312 |
| Conread position: | 274-585 |
| Cow position: | chr8:45200999-45201310 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 275-636 |
| Cow position: | chr8:46816363-46816724 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 236 |
| Conread position: | 275-636 |
| Cow position: | chr8:46816867-46817228 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 277-638 |
| Cow position: | chr8:55580890-55581251 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 229, 225 |
| Conread position: | 283-636 |
| Cow position: | chr8:46816959-46817312 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 53, 65 |
| Conread position: | 283-638 |
| Cow position: | chr8:46816035-46816390 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 65 |
| Conread position: | 292-637 |
| Cow position: | chr8:48407631-48407286 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 354-638 |
| Cow position: | chr8:48407653-48407369 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-636 |
| Cow position: | chr8:46815940-46816220 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 138 |
| Conread position: | 360-638 |
| Cow position: | chr8:55580805-55581083 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 397-626 |
| Cow position: | chr8:6958060-6957831 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.