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Cow genome map

           
Conread name:
           
rnmm21c_n23.y1
        

               
Conread position:
               
70-352
               

               
Cow position:
               
chr11:41215990-41215707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
96-330
               

               
Cow position:
               
chr11:75749694-75749476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
101-322
               

               
Cow position:
               
chr11:57285483-57285699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
106-341
               

               
Cow position:
               
chr11:36361423-36361657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
108-321
               

               
Cow position:
               
chr11:64607031-64607249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
108-372
               

               
Cow position:
               
chr11:21508228-21507958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
109-372
               

               
Cow position:
               
chr11:6245540-6245274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 175
               

               
Conread position:
               
110-373
               

               
Cow position:
               
chr11:40792478-40792752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
111-365
               

               
Cow position:
               
chr11:76369315-76369561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
6, 69
               

               
Conread position:
               
111-372
               

               
Cow position:
               
chr11:35669750-35669997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
113-340
               

               
Cow position:
               
chr11:20117289-20117060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
113-340
               

               
Cow position:
               
chr11:58048543-58048318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr11:38236460-38236208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
113-373
               

               
Cow position:
               
chr11:36112622-36112378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
114-358
               

               
Cow position:
               
chr11:29308792-29308549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
114-372
               

               
Cow position:
               
chr11:2788606-2788348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 162
               

               
Conread position:
               
116-261
               

               
Cow position:
               
chr11:9294005-9293856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
116-333
               

               
Cow position:
               
chr11:32653499-32653282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 165
               

               
Conread position:
               
116-338
               

               
Cow position:
               
chr11:47412048-47411830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
116-369
               

               
Cow position:
               
chr11:67911956-67912193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 43
               

               
Conread position:
               
116-372
               

               
Cow position:
               
chr11:36182901-36182646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
116-372
               

               
Cow position:
               
chr11:83926240-83926005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
117-339
               

               
Cow position:
               
chr11:25604164-25603935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
117-354
               

               
Cow position:
               
chr11:77745046-77745279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
117-355
               

               
Cow position:
               
chr11:43914500-43914263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
117-359
               

               
Cow position:
               
chr11:14649107-14649347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
117-365
               

               
Cow position:
               
chr11:71492654-71492898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
117-370
               

               
Cow position:
               
chr11:17831000-17831264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
117-373
               

               
Cow position:
               
chr11:64077295-64077552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
117-374
               

               
Cow position:
               
chr11:7331250-7331005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
118-372
               

               
Cow position:
               
chr11:62811503-62811253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
119-298
               

               
Cow position:
               
chr11:44176799-44176624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
119-333
               

               
Cow position:
               
chr11:36300378-36300584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 115
               

               
Conread position:
               
119-344
               

               
Cow position:
               
chr11:12555097-12555323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
24, 162
               

               
Conread position:
               
119-365
               

               
Cow position:
               
chr11:5433473-5433230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
119-365
               

               
Cow position:
               
chr11:7924398-7924627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
119-368
               

               
Cow position:
               
chr11:2907328-2907564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
119-368
               

               
Cow position:
               
chr11:6423191-6423446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
119-371
               

               
Cow position:
               
chr11:25791484-25791737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
15, 161
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr11:46746843-46746587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr11:66572286-66572541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr11:81849093-81848842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
120-362
               

               
Cow position:
               
chr11:18924951-18924710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
121-276
               

               
Cow position:
               
chr11:30528808-30528645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
121-342
               

               
Cow position:
               
chr11:79548730-79548952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
121-360
               

               
Cow position:
               
chr11:67312989-67312747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
121-368
               

               
Cow position:
               
chr11:30370302-30370068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
121-369
               

               
Cow position:
               
chr11:66188117-66188359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
121-372
               

               
Cow position:
               
chr11:65607489-65607737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
122-323
               

               
Cow position:
               
chr11:25968649-25968851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
122-342
               

               
Cow position:
               
chr11:19578138-19577926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
122-365
               

               
Cow position:
               
chr11:6258599-6258857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
123-257
               

               
Cow position:
               
chr11:81043330-81043469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
123-276
               

               
Cow position:
               
chr11:65939660-65939816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
123-304
               

               
Cow position:
               
chr11:36847370-36847190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
123-308
               

               
Cow position:
               
chr11:73977101-73977282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
123-312
               

               
Cow position:
               
chr11:33369354-33369165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 154
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr11:21590588-21590395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
123-337
               

               
Cow position:
               
chr11:19549678-19549474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
123-343
               

               
Cow position:
               
chr11:73940359-73940578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 118
               

               
Conread position:
               
123-344
               

               
Cow position:
               
chr11:36092716-36092934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
123-347
               

               
Cow position:
               
chr11:17517601-17517378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
123-358
               

               
Cow position:
               
chr11:18508826-18509062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 155
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr11:34646796-34646555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
123-368
               

               
Cow position:
               
chr11:5328987-5328738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
123-368
               

               
Cow position:
               
chr11:62482844-62482599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 153
               

               
Conread position:
               
123-371
               

               
Cow position:
               
chr11:28078691-28078460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr11:8670219-8669965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
56, 157
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr11:17889524-17889775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
25, 153
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr11:26143896-26144143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr11:52464611-52464368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr11:77013969-77013740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
123-373
               

               
Cow position:
               
chr11:33414430-33414191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
124-372
               

               
Cow position:
               
chr11:33286753-33287002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 158
               

               
Conread position:
               
125-372
               

               
Cow position:
               
chr11:45276947-45277192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr11:86895569-86895362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
127-360
               

               
Cow position:
               
chr11:62789323-62789097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
127-365
               

               
Cow position:
               
chr11:4207506-4207273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
127-365
               

               
Cow position:
               
chr11:54741882-54742119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
127-373
               

               
Cow position:
               
chr11:35724167-35723925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
127-374
               

               
Cow position:
               
chr11:3715020-3714777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
52, 145
               

               
Conread position:
               
128-275
               

               
Cow position:
               
chr11:8828208-8828053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
128-372
               

               
Cow position:
               
chr11:25620194-25620443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
129-345
               

               
Cow position:
               
chr11:66099661-66099881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 151
               

               
Conread position:
               
129-371
               

               
Cow position:
               
chr11:689464-689704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
129-372
               

               
Cow position:
               
chr11:30192372-30192130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
130-254
               

               
Cow position:
               
chr11:43627874-43627997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
130-291
               

               
Cow position:
               
chr11:1265348-1265508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
130-297
               

               
Cow position:
               
chr11:63491214-63491047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
130-301
               

               
Cow position:
               
chr11:62102251-62102422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 145
               

               
Conread position:
               
130-305
               

               
Cow position:
               
chr11:46010065-46010232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
130-306
               

               
Cow position:
               
chr11:63849755-63849931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
130-308
               

               
Cow position:
               
chr11:81175793-81175615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
130-315
               

               
Cow position:
               
chr11:6319933-6320121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 150
               

               
Conread position:
               
130-315
               

               
Cow position:
               
chr11:26442309-26442493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
130-321
               

               
Cow position:
               
chr11:23278770-23278959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
130-323
               

               
Cow position:
               
chr11:44620148-44619958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
46, 143
               

               
Conread position:
               
130-327
               

               
Cow position:
               
chr11:23220555-23220362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 64
               

               
Conread position:
               
130-327
               

               
Cow position:
               
chr11:46314207-46314011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
130-327
               

               
Cow position:
               
chr11:80370308-80370114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
130-337
               

               
Cow position:
               
chr11:47110450-47110242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
130-338
               

               
Cow position:
               
chr11:6094209-6094414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 98
               

               
Conread position:
               
130-341
               

               
Cow position:
               
chr11:42016444-42016653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
130-342
               

               
Cow position:
               
chr11:15366782-15366988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
130-342
               

               
Cow position:
               
chr11:37099979-37100184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
130-342
               

               
Cow position:
               
chr11:48315206-48315412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
130-352
               

               
Cow position:
               
chr11:71022195-71021975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
130-355
               

               
Cow position:
               
chr11:9237654-9237875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
130-355
               

               
Cow position:
               
chr11:40516919-40517144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 147
               

               
Conread position:
               
130-358
               

               
Cow position:
               
chr11:75090024-75090250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
130-359
               

               
Cow position:
               
chr11:48086111-48085886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
130-360
               

               
Cow position:
               
chr11:3896505-3896732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
130-364
               

               
Cow position:
               
chr11:45619545-45619315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 90
               

               
Conread position:
               
130-365
               

               
Cow position:
               
chr11:36136302-36136061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
130-365
               

               
Cow position:
               
chr11:53773877-53773643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
130-366
               

               
Cow position:
               
chr11:18119695-18119463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
130-368
               

               
Cow position:
               
chr11:39060412-39060643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
130-368
               

               
Cow position:
               
chr11:41549143-41549374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
130-368
               

               
Cow position:
               
chr11:42884591-42884827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
130-369
               

               
Cow position:
               
chr11:69168783-69168544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 148
               

               
Conread position:
               
130-371
               

               
Cow position:
               
chr11:52690330-52690563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
53, 88
               

               
Conread position:
               
130-371
               

               
Cow position:
               
chr11:55053057-55052826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
227, 16
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr11:13500206-13499973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr11:48296218-48295988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr11:63919872-63920098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr11:63998897-63999132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr11:70422400-70422636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 146
               

               
Conread position:
               
130-373
               

               
Cow position:
               
chr11:68883913-68883673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
131-359
               

               
Cow position:
               
chr11:83043173-83043395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
131-370
               

               
Cow position:
               
chr11:9270544-9270768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
132-298
               

               
Cow position:
               
chr11:44016437-44016272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
132-337
               

               
Cow position:
               
chr11:75557731-75557949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
132-371
               

               
Cow position:
               
chr11:30808404-30808638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
132-371
               

               
Cow position:
               
chr11:82730791-82731041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 247
               

               
Conread position:
               
132-372
               

               
Cow position:
               
chr11:27907963-27907737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
132-373
               

               
Cow position:
               
chr11:21843946-21844177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
133-275
               

               
Cow position:
               
chr11:9691199-9691052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
133-305
               

               
Cow position:
               
chr11:43641580-43641408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
133-314
               

               
Cow position:
               
chr11:26057455-26057638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
133-326
               

               
Cow position:
               
chr11:30986826-30986640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
133-328
               

               
Cow position:
               
chr11:84758018-84757831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
133-329
               

               
Cow position:
               
chr11:42206606-42206421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
133-331
               

               
Cow position:
               
chr11:63498940-63499131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
133-334
               

               
Cow position:
               
chr11:6320187-6320376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
133-343
               

               
Cow position:
               
chr11:74427871-74427661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 142
               

               
Conread position:
               
133-360
               

               
Cow position:
               
chr11:69417595-69417370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr11:21886022-21885799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr11:1380870-1380634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 149
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr11:70206506-70206280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr11:19946614-19946390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr11:39462811-39462579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
43, 87
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr11:41437994-41438231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr11:71854089-71854323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
5, 84
               

               
Conread position:
               
133-373
               

               
Cow position:
               
chr11:6202649-6202395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr11:44032196-44031956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr11:76835445-76835674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
134-302
               

               
Cow position:
               
chr11:17369716-17369555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
134-332
               

               
Cow position:
               
chr11:58102567-58102766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
134-344
               

               
Cow position:
               
chr11:29482251-29482453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
134-352
               

               
Cow position:
               
chr11:32782683-32782909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 154
               

               
Conread position:
               
134-353
               

               
Cow position:
               
chr11:85571615-85571831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
134-355
               

               
Cow position:
               
chr11:30688344-30688575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
134-355
               

               
Cow position:
               
chr11:52380683-52380900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
134-355
               

               
Cow position:
               
chr11:58594195-58594416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 147
               

               
Conread position:
               
134-362
               

               
Cow position:
               
chr11:15382305-15382538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
134-365
               

               
Cow position:
               
chr11:37435795-37436024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
134-365
               

               
Cow position:
               
chr11:71111088-71110853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
134-372
               

               
Cow position:
               
chr11:15772523-15772756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
134-372
               

               
Cow position:
               
chr11:30708695-30708462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
134-373
               

               
Cow position:
               
chr11:41213243-41212997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
135-247
               

               
Cow position:
               
chr11:22102568-22102684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
135-254
               

               
Cow position:
               
chr11:7395941-7395825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
135-256
               

               
Cow position:
               
chr11:70273650-70273527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
135-275
               

               
Cow position:
               
chr11:38656992-38657136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
135-275
               

               
Cow position:
               
chr11:55124095-55123952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
135-275
               

               
Cow position:
               
chr11:67172522-67172662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
135-290
               

               
Cow position:
               
chr11:68592209-68592053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 145
               

               
Conread position:
               
135-297
               

               
Cow position:
               
chr11:33271619-33271460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
135-302
               

               
Cow position:
               
chr11:51683406-51683239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
135-307
               

               
Cow position:
               
chr11:32800817-32800645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
41, 145
               

               
Conread position:
               
135-308
               

               
Cow position:
               
chr11:81143354-81143523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
135-309
               

               
Cow position:
               
chr11:76896183-76896357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 141
               

               
Conread position:
               
135-312
               

               
Cow position:
               
chr11:44859100-44859272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
135-313
               

               
Cow position:
               
chr11:59471294-59471115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 142
               

               
Conread position:
               
135-313
               

               
Cow position:
               
chr11:82725372-82725187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
135-315
               

               
Cow position:
               
chr11:35924252-35924072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
135-316
               

               
Cow position:
               
chr11:19147952-19148126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
135-316
               

               
Cow position:
               
chr11:68570192-68570370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
135-317
               

               
Cow position:
               
chr11:74839792-74839620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
135-319
               

               
Cow position:
               
chr11:7651880-7652060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
135-321
               

               
Cow position:
               
chr11:18574664-18574848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 144
               

               
Conread position:
               
135-322
               

               
Cow position:
               
chr11:70600637-70600824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
135-329
               

               
Cow position:
               
chr11:66041462-66041276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
135-330
               

               
Cow position:
               
chr11:4363727-4363915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
135-331
               

               
Cow position:
               
chr11:49210627-49210826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
135-332
               

               
Cow position:
               
chr11:81614334-81614519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
135-333
               

               
Cow position:
               
chr11:7571810-7571618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
135-336
               

               
Cow position:
               
chr11:1485044-1485236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
135-336
               

               
Cow position:
               
chr11:9836265-9836466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
38, 142
               

               
Conread position:
               
135-336
               

               
Cow position:
               
chr11:64781278-64781077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
135-338
               

               
Cow position:
               
chr11:45553662-45553454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
135-339
               

               
Cow position:
               
chr11:15017247-15017044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
135-339
               

               
Cow position:
               
chr11:60296928-60296718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
135-340
               

               
Cow position:
               
chr11:35182797-35183002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
135-341
               

               
Cow position:
               
chr11:77017420-77017227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
135-343
               

               
Cow position:
               
chr11:9699065-9699261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
135-347
               

               
Cow position:
               
chr11:46884569-46884353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
135-348
               

               
Cow position:
               
chr11:51846487-51846276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
135-349
               

               
Cow position:
               
chr11:81138402-81138189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
135-350
               

               
Cow position:
               
chr11:54428810-54428596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 143
               

               
Conread position:
               
135-353
               

               
Cow position:
               
chr11:9464027-9463810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
135-353
               

               
Cow position:
               
chr11:18425049-18425267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-354
               

               
Cow position:
               
chr11:32869192-32868975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 139
               

               
Conread position:
               
135-354
               

               
Cow position:
               
chr11:67614735-67614949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr11:7458090-7458310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr11:16315064-16314844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr11:30764682-30764462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr11:31024611-31024835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 145
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr11:33002157-33001936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr11:34747698-34747487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr11:34968423-34968642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr11:35769078-35768857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
6, 147
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr11:63975324-63975101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr11:67931301-67931513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr11:83357586-83357367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-356
               

               
Cow position:
               
chr11:19578832-19579044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
135-358
               

               
Cow position:
               
chr11:32710704-32710483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
135-358
               

               
Cow position:
               
chr11:45350320-45350543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
135-358
               

               
Cow position:
               
chr11:63382009-63382222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
135-358
               

               
Cow position:
               
chr11:65495155-65495367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr11:5075040-5075263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr11:32260722-32260500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
6, 129
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr11:62620566-62620342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
135-362
               

               
Cow position:
               
chr11:35212981-35213203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
135-362
               

               
Cow position:
               
chr11:48672904-48672678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr11:1980075-1980307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
41, 143
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr11:6107731-6107962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr11:10095533-10095305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 101
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr11:30165701-30165472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 145
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr11:36521070-36520836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
135-368
               

               
Cow position:
               
chr11:8496223-8495991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
135-368
               

               
Cow position:
               
chr11:35665369-35665604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
135-368
               

               
Cow position:
               
chr11:37918859-37919087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
135-369
               

               
Cow position:
               
chr11:72871087-72870856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 84
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr11:2084335-2084100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr11:20194234-20194470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr11:35536765-35536544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr11:35805850-35805614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr11:37804362-37804598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 137
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr11:53853271-53853044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:1067249-1067484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:3720445-3720210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:7378772-7378550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:7385624-7385394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:13940377-13940146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:20684380-20684617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:25119748-25119976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:27913475-27913240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:30638762-30638994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:31228142-31227918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:36914375-36914612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:36940404-36940641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:36977997-36977761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:37778628-37778875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:45742558-45742331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
235, 12
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:48383720-48383483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 154
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:49153129-49152904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:49872698-49872929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:55636035-55636271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:59024163-59024405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
44, 147
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:61454312-61454559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:62230378-62230136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 147
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:66325917-66326155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:70382499-70382735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 146
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:70951057-70950825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:81300431-81300666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:83398098-83397860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr11:85723884-85723653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr11:6643004-6642767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr11:6857920-6857685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr11:8259267-8259030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 137
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr11:17321858-17321601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr11:27404882-27405116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr11:32595649-32595411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr11:34616451-34616212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 143
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr11:36058988-36058750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr11:47837509-47837275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr11:80893972-80893737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
135-374
               

               
Cow position:
               
chr11:897853-897627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
135-374
               

               
Cow position:
               
chr11:40459295-40459060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 40
               

               
Conread position:
               
135-377
               

               
Cow position:
               
chr11:35562910-35562669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
136-275
               

               
Cow position:
               
chr11:23278965-23279110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
136-313
               

               
Cow position:
               
chr11:35732894-35733070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
43, 85
               

               
Conread position:
               
136-314
               

               
Cow position:
               
chr11:35544274-35544097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
136-331
               

               
Cow position:
               
chr11:6581023-6580828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 141
               

               
Conread position:
               
136-331
               

               
Cow position:
               
chr11:19657026-19657218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
136-331
               

               
Cow position:
               
chr11:77241890-77241699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
136-342
               

               
Cow position:
               
chr11:87171887-87172092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
136-347
               

               
Cow position:
               
chr11:10563193-10562988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
136-352
               

               
Cow position:
               
chr11:73983802-73984029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
136-355
               

               
Cow position:
               
chr11:40608404-40608622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
136-365
               

               
Cow position:
               
chr11:47784968-47784735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
136-368
               

               
Cow position:
               
chr11:47638835-47639068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
136-369
               

               
Cow position:
               
chr11:57724634-57724867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 136
               

               
Conread position:
               
136-371
               

               
Cow position:
               
chr11:72443302-72443068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
136-371
               

               
Cow position:
               
chr11:83042051-83042299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
38, 245
               

               
Conread position:
               
136-372
               

               
Cow position:
               
chr11:4636986-4637216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
136-372
               

               
Cow position:
               
chr11:22102712-22102944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 145
               

               
Conread position:
               
136-372
               

               
Cow position:
               
chr11:48650175-48649927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
37, 158
               

               
Conread position:
               
136-372
               

               
Cow position:
               
chr11:68909665-68909890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
136-373
               

               
Cow position:
               
chr11:7874329-7874094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
136-373
               

               
Cow position:
               
chr11:67600966-67600739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
136-374
               

               
Cow position:
               
chr11:64351598-64351838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 138
               

               
Conread position:
               
137-250
               

               
Cow position:
               
chr11:28092639-28092522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
137-273
               

               
Cow position:
               
chr11:69035348-69035208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
137-307
               

               
Cow position:
               
chr11:50629458-50629296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
137-322
               

               
Cow position:
               
chr11:42498032-42497849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
137-330
               

               
Cow position:
               
chr11:32054997-32055186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
137-331
               

               
Cow position:
               
chr11:9279619-9279428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
137-342
               

               
Cow position:
               
chr11:68326674-68326879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 140
               

               
Conread position:
               
137-351
               

               
Cow position:
               
chr11:4221505-4221294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
137-360
               

               
Cow position:
               
chr11:66939404-66939626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
137-365
               

               
Cow position:
               
chr11:38334709-38334485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
137-365
               

               
Cow position:
               
chr11:47310796-47311022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 139
               

               
Conread position:
               
137-368
               

               
Cow position:
               
chr11:5417074-5416843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
137-368
               

               
Cow position:
               
chr11:21421750-21421978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
137-370
               

               
Cow position:
               
chr11:64101960-64101732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
137-371
               

               
Cow position:
               
chr11:53778807-53778571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
137-372
               

               
Cow position:
               
chr11:51729462-51729242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
137-372
               

               
Cow position:
               
chr11:56311412-56311640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
137-372
               

               
Cow position:
               
chr11:70978548-70978778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
137-373
               

               
Cow position:
               
chr11:31875277-31875045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
233, 38
               

               
Conread position:
               
137-377
               

               
Cow position:
               
chr11:19487291-19487531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
37, 131
               

               
Conread position:
               
137-377
               

               
Cow position:
               
chr11:70483664-70483900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
138-365
               

               
Cow position:
               
chr11:17721613-17721840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
138-368
               

               
Cow position:
               
chr11:18699057-18698836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
138-369
               

               
Cow position:
               
chr11:17227464-17227684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
138-372
               

               
Cow position:
               
chr11:7560187-7559955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
38, 8
               

               
Conread position:
               
138-372
               

               
Cow position:
               
chr11:84385453-84385681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
139-308
               

               
Cow position:
               
chr11:37565055-37564892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
139-335
               

               
Cow position:
               
chr11:5176195-5176388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 85
               

               
Conread position:
               
139-353
               

               
Cow position:
               
chr11:48776127-48776343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
139-354
               

               
Cow position:
               
chr11:70458230-70458014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
139-355
               

               
Cow position:
               
chr11:32881331-32881115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
139-356
               

               
Cow position:
               
chr11:55398965-55399177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
139-358
               

               
Cow position:
               
chr11:20205672-20205883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
139-368
               

               
Cow position:
               
chr11:53817039-53816816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
139-371
               

               
Cow position:
               
chr11:29677392-29677159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr11:4436518-4436274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr11:83032863-83032636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
140-274
               

               
Cow position:
               
chr11:53460883-53460745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
140-308
               

               
Cow position:
               
chr11:32108503-32108670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
140-308
               

               
Cow position:
               
chr11:63475486-63475654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 137
               

               
Conread position:
               
140-315
               

               
Cow position:
               
chr11:1625038-1625212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 6
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr11:41576688-41576884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
140-355
               

               
Cow position:
               
chr11:8437505-8437722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
140-357
               

               
Cow position:
               
chr11:3920118-3920334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
140-365
               

               
Cow position:
               
chr11:6633911-6633672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 150
               

               
Conread position:
               
140-368
               

               
Cow position:
               
chr11:30209638-30209861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
36, 134
               

               
Conread position:
               
140-368
               

               
Cow position:
               
chr11:76653206-76652978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
140-371
               

               
Cow position:
               
chr11:17278498-17278716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
140-371
               

               
Cow position:
               
chr11:20238861-20238633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
140-371
               

               
Cow position:
               
chr11:84977189-84977402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
122, 34
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr11:17859968-17860200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr11:29659744-29659515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr11:49149231-49148995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr11:53649186-53649419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr11:55334104-55333865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 149
               

               
Conread position:
               
141-298
               

               
Cow position:
               
chr11:15881236-15881392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
141-319
               

               
Cow position:
               
chr11:67208433-67208260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
141-321
               

               
Cow position:
               
chr11:40538733-40538556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
141-323
               

               
Cow position:
               
chr11:41278371-41278189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr11:30322310-30322494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
141-330
               

               
Cow position:
               
chr11:79666078-79666265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
141-337
               

               
Cow position:
               
chr11:41980020-41980215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 135
               

               
Conread position:
               
141-340
               

               
Cow position:
               
chr11:77758577-77758774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
141-342
               

               
Cow position:
               
chr11:27502519-27502717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
141-351
               

               
Cow position:
               
chr11:73573830-73573621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
141-355
               

               
Cow position:
               
chr11:51687552-51687759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
191, 38
               

               
Conread position:
               
141-358
               

               
Cow position:
               
chr11:31537264-31537471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
141-368
               

               
Cow position:
               
chr11:5961491-5961262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 140
               

               
Conread position:
               
141-368
               

               
Cow position:
               
chr11:41985864-41986087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
141-370
               

               
Cow position:
               
chr11:1485676-1485918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
141-371
               

               
Cow position:
               
chr11:56288729-56288502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
141-371
               

               
Cow position:
               
chr11:63065836-63065612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr11:3740148-3739909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr11:6233694-6233924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
35, 131
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr11:13592923-13592690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 138
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr11:31417607-31417375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr11:43524794-43524563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr11:55744653-55744423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr11:68913327-68913096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr11:76890225-76890001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr11:81763053-81762818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
141-373
               

               
Cow position:
               
chr11:15369573-15369341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
141-373
               

               
Cow position:
               
chr11:50472502-50472272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
141-374
               

               
Cow position:
               
chr11:28367895-28367658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
35, 111
               

               
Conread position:
               
141-377
               

               
Cow position:
               
chr11:62889708-62889943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
142-273
               

               
Cow position:
               
chr11:24551574-24551438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
142-307
               

               
Cow position:
               
chr11:17552896-17553061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
142-308
               

               
Cow position:
               
chr11:83028175-83028012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
142-323
               

               
Cow position:
               
chr11:33374149-33373969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
142-333
               

               
Cow position:
               
chr11:15526290-15526107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
132, 34
               

               
Conread position:
               
142-334
               

               
Cow position:
               
chr11:36917582-36917784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 132
               

               
Conread position:
               
142-337
               

               
Cow position:
               
chr11:5559466-5559274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
142-355
               

               
Cow position:
               
chr11:28675260-28675048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 133
               

               
Conread position:
               
142-355
               

               
Cow position:
               
chr11:32777856-32777651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
142-357
               

               
Cow position:
               
chr11:30894820-30895033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
142-360
               

               
Cow position:
               
chr11:6395936-6395722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
142-368
               

               
Cow position:
               
chr11:64009908-64009678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
142-369
               

               
Cow position:
               
chr11:35351850-35352081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
142-371
               

               
Cow position:
               
chr11:78380886-78381104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
142-372
               

               
Cow position:
               
chr11:30830440-30830659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
142-372
               

               
Cow position:
               
chr11:59463457-59463681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
142-372
               

               
Cow position:
               
chr11:72375483-72375728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
142-372
               

               
Cow position:
               
chr11:84228540-84228759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
142-373
               

               
Cow position:
               
chr11:75479840-75480065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
142-373
               

               
Cow position:
               
chr11:80412826-80413060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 141
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr11:78544466-78544255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 137
               

               
Conread position:
               
144-365
               

               
Cow position:
               
chr11:35980960-35981186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
35, 128
               

               
Conread position:
               
145-266
               

               
Cow position:
               
chr11:43594248-43594372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
145-275
               

               
Cow position:
               
chr11:26823292-26823157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
145-293
               

               
Cow position:
               
chr11:12742314-12742457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
145-328
               

               
Cow position:
               
chr11:76248226-76248048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
145-335
               

               
Cow position:
               
chr11:63407874-63407691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
145-341
               

               
Cow position:
               
chr11:20234866-20234670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
145-341
               

               
Cow position:
               
chr11:21124429-21124621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 137
               

               
Conread position:
               
145-343
               

               
Cow position:
               
chr11:21830031-21830226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
145-343
               

               
Cow position:
               
chr11:42084493-42084692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 133
               

               
Conread position:
               
145-364
               

               
Cow position:
               
chr11:62742468-62742680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
145-365
               

               
Cow position:
               
chr11:42835773-42835995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
180, 128
               

               
Conread position:
               
145-371
               

               
Cow position:
               
chr11:48660110-48659891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
145-372
               

               
Cow position:
               
chr11:19247025-19247243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
145-374
               

               
Cow position:
               
chr11:46747679-46747908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
146-363
               

               
Cow position:
               
chr11:23271827-23272038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
146-365
               

               
Cow position:
               
chr11:46999165-46998942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 137
               

               
Conread position:
               
146-368
               

               
Cow position:
               
chr11:2874581-2874350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 134
               

               
Conread position:
               
146-372
               

               
Cow position:
               
chr11:63485111-63484901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
146-372
               

               
Cow position:
               
chr11:68112080-68112307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
146-373
               

               
Cow position:
               
chr11:41313483-41313702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
147-365
               

               
Cow position:
               
chr11:18543343-18543544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
149-372
               

               
Cow position:
               
chr11:64029091-64029307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
149-372
               

               
Cow position:
               
chr11:67345483-67345698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 135
               

               
Conread position:
               
150-331
               

               
Cow position:
               
chr11:60720279-60720460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
24, 127
               

               
Conread position:
               
150-342
               

               
Cow position:
               
chr11:47314248-47314447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
150-365
               

               
Cow position:
               
chr11:36920403-36920616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
151-349
               

               
Cow position:
               
chr11:68660440-68660633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
151-353
               

               
Cow position:
               
chr11:60486242-60486446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
151-365
               

               
Cow position:
               
chr11:35109366-35109576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
151-365
               

               
Cow position:
               
chr11:43360613-43360815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
151-372
               

               
Cow position:
               
chr11:29786319-29786544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
152-271
               

               
Cow position:
               
chr11:80503988-80504111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
152-347
               

               
Cow position:
               
chr11:49207884-49207691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
152-372
               

               
Cow position:
               
chr11:87155690-87155476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
153-327
               

               
Cow position:
               
chr11:26343274-26343101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
153-349
               

               
Cow position:
               
chr11:25783887-25783690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
153-358
               

               
Cow position:
               
chr11:21173265-21173465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
153-365
               

               
Cow position:
               
chr11:77705922-77705720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
153-372
               

               
Cow position:
               
chr11:5218993-5219203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
153-372
               

               
Cow position:
               
chr11:34644830-34644611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 124
               

               
Conread position:
               
153-372
               

               
Cow position:
               
chr11:48474881-48474659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
153-373
               

               
Cow position:
               
chr11:13042976-13043191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
154-265
               

               
Cow position:
               
chr11:67417980-67417866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
154-323
               

               
Cow position:
               
chr11:30600019-30600188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 127
               

               
Conread position:
               
154-331
               

               
Cow position:
               
chr11:2836031-2835854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
17, 123
               

               
Conread position:
               
154-338
               

               
Cow position:
               
chr11:27760689-27760506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
154-351
               

               
Cow position:
               
chr11:45872139-45872335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
154-365
               

               
Cow position:
               
chr11:39554018-39554236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
154-372
               

               
Cow position:
               
chr11:8462176-8461959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
154-375
               

               
Cow position:
               
chr11:34467733-34467524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
155-275
               

               
Cow position:
               
chr11:899606-899481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
155-314
               

               
Cow position:
               
chr11:55117613-55117457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
155-346
               

               
Cow position:
               
chr11:26535954-26535768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
155-372
               

               
Cow position:
               
chr11:27565486-27565288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
155-372
               

               
Cow position:
               
chr11:47772212-47772434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
156-364
               

               
Cow position:
               
chr11:26632844-26633051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
156-365
               

               
Cow position:
               
chr11:39854853-39855052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
156-368
               

               
Cow position:
               
chr11:30728570-30728359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
156-371
               

               
Cow position:
               
chr11:12076916-12077130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
156-371
               

               
Cow position:
               
chr11:35926740-35926948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
156-371
               

               
Cow position:
               
chr11:82940461-82940662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
156-372
               

               
Cow position:
               
chr11:34144750-34144959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
156-372
               

               
Cow position:
               
chr11:63435691-63435477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
157-306
               

               
Cow position:
               
chr11:63695671-63695825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 124
               

               
Conread position:
               
159-372
               

               
Cow position:
               
chr11:62663076-62663277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
160-372
               

               
Cow position:
               
chr11:35791655-35791867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
169-347
               

               
Cow position:
               
chr11:62004318-62004492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
153, 6
               

               
Conread position:
               
170-377
               

               
Cow position:
               
chr11:8683928-8684132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
178, 5
               

               
Conread position:
               
171-372
               

               
Cow position:
               
chr11:20602368-20602180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
186, 42
               

               
Conread position:
               
173-366
               

               
Cow position:
               
chr11:62778592-62778405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
173-370
               

               
Cow position:
               
chr11:32436485-32436291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
173-372
               

               
Cow position:
               
chr11:62754171-62754363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
174-308
               

               
Cow position:
               
chr11:37490430-37490558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
174-341
               

               
Cow position:
               
chr11:41983011-41983181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
174-360
               

               
Cow position:
               
chr11:34113409-34113231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
144, 33
               

               
Conread position:
               
174-369
               

               
Cow position:
               
chr11:63909508-63909706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
175-323
               

               
Cow position:
               
chr11:17807815-17807958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
175-331
               

               
Cow position:
               
chr11:41281192-41281040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
175-341
               

               
Cow position:
               
chr11:79707849-79707699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
175-342
               

               
Cow position:
               
chr11:35140056-35139892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 98
               

               
Conread position:
               
175-344
               

               
Cow position:
               
chr11:18791917-18792085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
175-358
               

               
Cow position:
               
chr11:64409112-64408945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
175-360
               

               
Cow position:
               
chr11:19232804-19232986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
180, 98
               

               
Conread position:
               
175-365
               

               
Cow position:
               
chr11:8988090-8988268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
175-365
               

               
Cow position:
               
chr11:14875622-14875814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
150, 98
               

               
Conread position:
               
175-368
               

               
Cow position:
               
chr11:34136387-34136202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr11:17493629-17493434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr11:53510355-53510544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr11:71868457-71868648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
175-373
               

               
Cow position:
               
chr11:8544870-8545059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
176-365
               

               
Cow position:
               
chr11:38670835-38670647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
92, 82
               

               
Conread position:
               
176-368
               

               
Cow position:
               
chr11:81406022-81406203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
177-365
               

               
Cow position:
               
chr11:63202103-63202288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
123, 96
               

               
Conread position:
               
178-332
               

               
Cow position:
               
chr11:69624428-69624577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
182-323
               

               
Cow position:
               
chr11:61178491-61178361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
183-338
               

               
Cow position:
               
chr11:38202109-38201958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
185-355
               

               
Cow position:
               
chr11:2344388-2344222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
185-362
               

               
Cow position:
               
chr11:4674307-4674481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
186-333
               

               
Cow position:
               
chr11:79869465-79869319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
186-369
               

               
Cow position:
               
chr11:45849361-45849542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
189-321
               

               
Cow position:
               
chr11:3948846-3948717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
197-365
               

               
Cow position:
               
chr11:40478726-40478891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
200-368
               

               
Cow position:
               
chr11:54334451-54334287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
201-372
               

               
Cow position:
               
chr11:48512284-48512120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
201-373
               

               
Cow position:
               
chr11:21910505-21910672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
203-340
               

               
Cow position:
               
chr11:37335970-37336102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
203-372
               

               
Cow position:
               
chr11:18587476-18587640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
204-329
               

               
Cow position:
               
chr11:37982459-37982580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
204-335
               

               
Cow position:
               
chr11:36849036-36848909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
204-354
               

               
Cow position:
               
chr11:5789781-5789927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
204-360
               

               
Cow position:
               
chr11:34032078-34032235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
204-368
               

               
Cow position:
               
chr11:15373960-15373797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
204-368
               

               
Cow position:
               
chr11:61958626-61958785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
204-371
               

               
Cow position:
               
chr11:70826067-70825905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr11:30888161-30888327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 115
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr11:72333707-72333545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr11:82289697-82289538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:28644206-28644042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:56290630-56290466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
204-374
               

               
Cow position:
               
chr11:4652852-4653020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
205-343
               

               
Cow position:
               
chr11:70517477-70517610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
205-359
               

               
Cow position:
               
chr11:62168214-62168363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
205-363
               

               
Cow position:
               
chr11:58938629-58938781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
205-372
               

               
Cow position:
               
chr11:35573374-35573535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
205-372
               

               
Cow position:
               
chr11:83687316-83687478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
206-365
               

               
Cow position:
               
chr11:69307630-69307475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
206-371
               

               
Cow position:
               
chr11:23232405-23232559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
207-364
               

               
Cow position:
               
chr11:377527-377679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
207-372
               

               
Cow position:
               
chr11:29983603-29983761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
209-369
               

               
Cow position:
               
chr11:2933260-2933102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
210-347
               

               
Cow position:
               
chr11:15682867-15683000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
210-365
               

               
Cow position:
               
chr11:42359233-42359076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
7, 43
               

               
Conread position:
               
210-365
               

               
Cow position:
               
chr11:68173645-68173493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
210-372
               

               
Cow position:
               
chr11:7590303-7590148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
210-372
               

               
Cow position:
               
chr11:30925267-30925112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
211-360
               

               
Cow position:
               
chr11:69415487-69415630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
211-372
               

               
Cow position:
               
chr11:61137063-61137219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
213-369
               

               
Cow position:
               
chr11:29946803-29946955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr11:7307740-7307584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
216-371
               

               
Cow position:
               
chr11:84890611-84890760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
217-372
               

               
Cow position:
               
chr11:33345551-33345401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
217-372
               

               
Cow position:
               
chr11:53147426-53147579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
218-371
               

               
Cow position:
               
chr11:81931012-81931155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
218-373
               

               
Cow position:
               
chr11:36799203-36799352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
222-371
               

               
Cow position:
               
chr11:1157744-1157601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
224-364
               

               
Cow position:
               
chr11:33311076-33310936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
224-370
               

               
Cow position:
               
chr11:62155737-62155595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
225-372
               

               
Cow position:
               
chr11:63482332-63482471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
226-372
               

               
Cow position:
               
chr11:56734725-56734586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
227-365
               

               
Cow position:
               
chr11:1362372-1362506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
227-369
               

               
Cow position:
               
chr11:64867925-64868063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
230-365
               

               
Cow position:
               
chr11:39118850-39118717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
236-365
               

               
Cow position:
               
chr11:18608151-18608276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
237-372
               

               
Cow position:
               
chr11:34106584-34106714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
241-372
               

               
Cow position:
               
chr11:52983757-52983631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
247-373
               

               
Cow position:
               
chr11:71482455-71482332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 31
               
Show alignments to all cow chromosomes.