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Cow genome map

           
Conread name:
           
rnmm21c_n23.y1
        

               
Conread position:
               
93-352
               

               
Cow position:
               
chr13:44278086-44278344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
96-372
               

               
Cow position:
               
chr13:14411632-14411908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
80, 182
               

               
Conread position:
               
110-304
               

               
Cow position:
               
chr13:28587991-28587797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 167
               

               
Conread position:
               
111-275
               

               
Cow position:
               
chr13:9702212-9702380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
112-305
               

               
Cow position:
               
chr13:22729649-22729456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
67, 165
               

               
Conread position:
               
114-307
               

               
Cow position:
               
chr13:21009584-21009787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
114-372
               

               
Cow position:
               
chr13:52459713-52459472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
114-373
               

               
Cow position:
               
chr13:54701938-54702199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
115-335
               

               
Cow position:
               
chr13:1538997-1539217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
115-336
               

               
Cow position:
               
chr13:17975201-17974988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
115-372
               

               
Cow position:
               
chr13:45352787-45353045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 162
               

               
Conread position:
               
115-377
               

               
Cow position:
               
chr13:20137578-20137840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
116-363
               

               
Cow position:
               
chr13:17438100-17437849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
116-373
               

               
Cow position:
               
chr13:23141628-23141887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 163
               

               
Conread position:
               
117-331
               

               
Cow position:
               
chr13:19427399-19427607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
117-372
               

               
Cow position:
               
chr13:20880062-20879813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
118-369
               

               
Cow position:
               
chr13:62238528-62238775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
118-372
               

               
Cow position:
               
chr13:21136145-21135889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
118-373
               

               
Cow position:
               
chr13:56035094-56034845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
251, 90
               

               
Conread position:
               
118-377
               

               
Cow position:
               
chr13:28071641-28071890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
119-264
               

               
Cow position:
               
chr13:43102743-43102894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
119-275
               

               
Cow position:
               
chr13:34393227-34393070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
119-305
               

               
Cow position:
               
chr13:10055181-10055367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
119-322
               

               
Cow position:
               
chr13:10986744-10986539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
119-339
               

               
Cow position:
               
chr13:52011081-52010860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
119-365
               

               
Cow position:
               
chr13:47676175-47675929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
24, 119
               

               
Conread position:
               
119-371
               

               
Cow position:
               
chr13:52641187-52640937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr13:40490979-40491227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
119-373
               

               
Cow position:
               
chr13:20805638-20805391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
119-373
               

               
Cow position:
               
chr13:34729075-34728834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
120-371
               

               
Cow position:
               
chr13:41806542-41806783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
120-372
               

               
Cow position:
               
chr13:44201773-44202014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
121-331
               

               
Cow position:
               
chr13:11201804-11202013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
121-362
               

               
Cow position:
               
chr13:14940561-14940810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
121-368
               

               
Cow position:
               
chr13:8699980-8699728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 159
               

               
Conread position:
               
122-373
               

               
Cow position:
               
chr13:19223418-19223660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
57, 155
               

               
Conread position:
               
123-273
               

               
Cow position:
               
chr13:21012733-21012888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
123-273
               

               
Cow position:
               
chr13:24759578-24759413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
123-273
               

               
Cow position:
               
chr13:55327209-55327359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
123-275
               

               
Cow position:
               
chr13:242400-242555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
123-305
               

               
Cow position:
               
chr13:9551131-9551307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
123-321
               

               
Cow position:
               
chr13:20789751-20789549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 104
               

               
Conread position:
               
123-341
               

               
Cow position:
               
chr13:11146820-11147039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
19, 155
               

               
Conread position:
               
123-342
               

               
Cow position:
               
chr13:9124696-9124907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
123-343
               

               
Cow position:
               
chr13:13797050-13796827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 157
               

               
Conread position:
               
123-355
               

               
Cow position:
               
chr13:8425219-8425452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 159
               

               
Conread position:
               
123-364
               

               
Cow position:
               
chr13:50768359-50768601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 158
               

               
Conread position:
               
123-365
               

               
Cow position:
               
chr13:30798477-30798728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 153
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr13:9800289-9800522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr13:17611784-17611540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr13:38329387-38329628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
123-373
               

               
Cow position:
               
chr13:585106-584859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 149
               

               
Conread position:
               
123-373
               

               
Cow position:
               
chr13:14063751-14063508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
123-377
               

               
Cow position:
               
chr13:12876208-12875958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 149
               

               
Conread position:
               
124-363
               

               
Cow position:
               
chr13:17813240-17813475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
126-352
               

               
Cow position:
               
chr13:28439188-28439403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
224, 20
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:12449210-12448991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
127-365
               

               
Cow position:
               
chr13:16907983-16908223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
21, 157
               

               
Conread position:
               
127-373
               

               
Cow position:
               
chr13:11434802-11434560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
127-373
               

               
Cow position:
               
chr13:59170416-59170666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
128-369
               

               
Cow position:
               
chr13:10522712-10522943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
129-308
               

               
Cow position:
               
chr13:42613865-42614033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
129-323
               

               
Cow position:
               
chr13:28376787-28376596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
130-236
               

               
Cow position:
               
chr13:20654087-20653977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
130-278
               

               
Cow position:
               
chr13:52929206-52929357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
130-297
               

               
Cow position:
               
chr13:8682226-8682393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
130-301
               

               
Cow position:
               
chr13:18814512-18814690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 167
               

               
Conread position:
               
130-302
               

               
Cow position:
               
chr13:53847344-53847178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
130-305
               

               
Cow position:
               
chr13:5659990-5659821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
130-313
               

               
Cow position:
               
chr13:28605620-28605437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 151
               

               
Conread position:
               
130-316
               

               
Cow position:
               
chr13:24107771-24107591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
130-321
               

               
Cow position:
               
chr13:17135441-17135251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
9, 139
               

               
Conread position:
               
130-323
               

               
Cow position:
               
chr13:62252070-62251880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
130-327
               

               
Cow position:
               
chr13:26317116-26316918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 148
               

               
Conread position:
               
130-328
               

               
Cow position:
               
chr13:17994597-17994404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
130-330
               

               
Cow position:
               
chr13:28695633-28695831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
130-330
               

               
Cow position:
               
chr13:52464515-52464712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
130-331
               

               
Cow position:
               
chr13:21024758-21024956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 152
               

               
Conread position:
               
130-333
               

               
Cow position:
               
chr13:3149657-3149459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
130-333
               

               
Cow position:
               
chr13:21246937-21246735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
130-334
               

               
Cow position:
               
chr13:20368107-20367904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
130-334
               

               
Cow position:
               
chr13:48373540-48373343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
130-338
               

               
Cow position:
               
chr13:45499008-45499208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
130-341
               

               
Cow position:
               
chr13:34533153-34532950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
130-341
               

               
Cow position:
               
chr13:37030125-37030324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
130-342
               

               
Cow position:
               
chr13:24121552-24121756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
130-342
               

               
Cow position:
               
chr13:41115615-41115825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
130-343
               

               
Cow position:
               
chr13:20088942-20088731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
130-344
               

               
Cow position:
               
chr13:23975390-23975180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
130-347
               

               
Cow position:
               
chr13:47643824-47644052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
130-348
               

               
Cow position:
               
chr13:24094542-24094328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 107
               

               
Conread position:
               
130-348
               

               
Cow position:
               
chr13:54236585-54236792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
130-354
               

               
Cow position:
               
chr13:4790347-4790122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
130-355
               

               
Cow position:
               
chr13:3160178-3160392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
130-355
               

               
Cow position:
               
chr13:37775431-37775211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr13:151745-151965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
130-363
               

               
Cow position:
               
chr13:28536546-28536318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
130-364
               

               
Cow position:
               
chr13:25941486-25941258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
130-364
               

               
Cow position:
               
chr13:39398405-39398658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 155
               

               
Conread position:
               
130-368
               

               
Cow position:
               
chr13:57002497-57002735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
49, 149
               

               
Conread position:
               
130-369
               

               
Cow position:
               
chr13:32017741-32017502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 145
               

               
Conread position:
               
130-371
               

               
Cow position:
               
chr13:11103434-11103182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 152
               

               
Conread position:
               
130-371
               

               
Cow position:
               
chr13:46111744-46111976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr13:5911116-5910890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr13:7440148-7440380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr13:37069119-37069357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr13:38284194-38283966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr13:52477868-52477637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr13:52749688-52749462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr13:55582969-55583206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
131-342
               

               
Cow position:
               
chr13:11942400-11942196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
131-371
               

               
Cow position:
               
chr13:11060750-11061001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 156
               

               
Conread position:
               
131-372
               

               
Cow position:
               
chr13:6183655-6183408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 153
               

               
Conread position:
               
132-334
               

               
Cow position:
               
chr13:16163365-16163557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
132-372
               

               
Cow position:
               
chr13:19393073-19393303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
132-372
               

               
Cow position:
               
chr13:37621600-37621347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 167
               

               
Conread position:
               
133-305
               

               
Cow position:
               
chr13:43849480-43849648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
133-310
               

               
Cow position:
               
chr13:19588646-19588823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
133-315
               

               
Cow position:
               
chr13:28081496-28081678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
133-325
               

               
Cow position:
               
chr13:53357607-53357799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 144
               

               
Conread position:
               
133-334
               

               
Cow position:
               
chr13:5735142-5735350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
133-340
               

               
Cow position:
               
chr13:37555091-37554893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
133-342
               

               
Cow position:
               
chr13:8637472-8637681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
46, 145
               

               
Conread position:
               
133-344
               

               
Cow position:
               
chr13:53865414-53865621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
133-350
               

               
Cow position:
               
chr13:43788069-43787846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
133-350
               

               
Cow position:
               
chr13:43839908-43839685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
133-354
               

               
Cow position:
               
chr13:55080914-55081137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
9, 114
               

               
Conread position:
               
133-355
               

               
Cow position:
               
chr13:7059236-7059458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
133-355
               

               
Cow position:
               
chr13:37614418-37614194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
133-355
               

               
Cow position:
               
chr13:54582654-54582868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr13:3143026-3143251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 145
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr13:12923652-12923876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
133-363
               

               
Cow position:
               
chr13:13775475-13775239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
43, 154
               

               
Conread position:
               
133-363
               

               
Cow position:
               
chr13:55775143-55775361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
133-365
               

               
Cow position:
               
chr13:49795816-49796029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr13:18999309-18999544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 148
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr13:48252190-48251967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr13:42113793-42114032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 146
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr13:42672652-42672411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 146
               

               
Conread position:
               
133-373
               

               
Cow position:
               
chr13:55765397-55765165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr13:50583040-50582802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
134-273
               

               
Cow position:
               
chr13:20698507-20698365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
134-275
               

               
Cow position:
               
chr13:10855181-10855040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-298
               

               
Cow position:
               
chr13:9108894-9108736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
134-305
               

               
Cow position:
               
chr13:51198588-51198757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
134-320
               

               
Cow position:
               
chr13:6996933-6997115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
134-324
               

               
Cow position:
               
chr13:16718576-16718383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
134-327
               

               
Cow position:
               
chr13:37946607-37946421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
134-327
               

               
Cow position:
               
chr13:50714923-50715117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 104
               

               
Conread position:
               
134-337
               

               
Cow position:
               
chr13:47538370-47538181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
134-344
               

               
Cow position:
               
chr13:48370520-48370312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
182, 12
               

               
Conread position:
               
134-358
               

               
Cow position:
               
chr13:53850601-53850824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr13:30315279-30315509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 146
               

               
Conread position:
               
134-372
               

               
Cow position:
               
chr13:18197828-18197597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
134-372
               

               
Cow position:
               
chr13:18491387-18491608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
134-372
               

               
Cow position:
               
chr13:21313898-21313661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
35, 142
               

               
Conread position:
               
134-372
               

               
Cow position:
               
chr13:47186009-47186246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
134-373
               

               
Cow position:
               
chr13:12673509-12673281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
134-373
               

               
Cow position:
               
chr13:40541330-40541092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
135-240
               

               
Cow position:
               
chr13:14383856-14383965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
135-262
               

               
Cow position:
               
chr13:8779036-8779163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
135-266
               

               
Cow position:
               
chr13:16138030-16138155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
135-275
               

               
Cow position:
               
chr13:27146600-27146744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
135-287
               

               
Cow position:
               
chr13:29507390-29507550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
135-297
               

               
Cow position:
               
chr13:14782128-14782280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
135-297
               

               
Cow position:
               
chr13:20854680-20854518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
135-298
               

               
Cow position:
               
chr13:21886901-21886738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
44, 144
               

               
Conread position:
               
135-306
               

               
Cow position:
               
chr13:1347388-1347219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
135-309
               

               
Cow position:
               
chr13:26377641-26377466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 114
               

               
Conread position:
               
135-311
               

               
Cow position:
               
chr13:5930530-5930353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
135-313
               

               
Cow position:
               
chr13:5175380-5175551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
135-313
               

               
Cow position:
               
chr13:10423301-10423475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
40, 98
               

               
Conread position:
               
135-313
               

               
Cow position:
               
chr13:14543914-14544089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
135-314
               

               
Cow position:
               
chr13:6377483-6377662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 141
               

               
Conread position:
               
135-317
               

               
Cow position:
               
chr13:17624097-17624280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
135-318
               

               
Cow position:
               
chr13:14351358-14351541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
135-321
               

               
Cow position:
               
chr13:8367499-8367677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
135-321
               

               
Cow position:
               
chr13:33518179-33517994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 145
               

               
Conread position:
               
135-322
               

               
Cow position:
               
chr13:10511926-10511738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 137
               

               
Conread position:
               
135-322
               

               
Cow position:
               
chr13:16476634-16476820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
135-327
               

               
Cow position:
               
chr13:57929783-57929604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
135-331
               

               
Cow position:
               
chr13:3775903-3775709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
135-333
               

               
Cow position:
               
chr13:6113750-6113552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
135-333
               

               
Cow position:
               
chr13:15162856-15162661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
44, 146
               

               
Conread position:
               
135-334
               

               
Cow position:
               
chr13:12769143-12768944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
135-335
               

               
Cow position:
               
chr13:17837157-17836963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
135-335
               

               
Cow position:
               
chr13:27028125-27027922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
135-338
               

               
Cow position:
               
chr13:7716910-7716707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
135-338
               

               
Cow position:
               
chr13:10220737-10220940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 142
               

               
Conread position:
               
135-342
               

               
Cow position:
               
chr13:17845264-17845471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-343
               

               
Cow position:
               
chr13:16003725-16003517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-343
               

               
Cow position:
               
chr13:19006649-19006450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
135-344
               

               
Cow position:
               
chr13:2418582-2418375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
135-351
               

               
Cow position:
               
chr13:35659535-35659751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
135-352
               

               
Cow position:
               
chr13:49823803-49824016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
135-353
               

               
Cow position:
               
chr13:31581958-31581742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr13:773136-773352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 128
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr13:1363466-1363690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr13:2822647-2822866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr13:8194876-8195094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr13:23961028-23960810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr13:40937336-40937121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr13:52283689-52283908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
135-355
               

               
Cow position:
               
chr13:55161990-55162208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
135-356
               

               
Cow position:
               
chr13:28500287-28500067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
135-358
               

               
Cow position:
               
chr13:21170307-21170527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
135-360
               

               
Cow position:
               
chr13:17498001-17498217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
135-362
               

               
Cow position:
               
chr13:7046660-7046873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
135-362
               

               
Cow position:
               
chr13:22122489-22122717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 137
               

               
Conread position:
               
135-362
               

               
Cow position:
               
chr13:24160229-24160457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 137
               

               
Conread position:
               
135-363
               

               
Cow position:
               
chr13:1791650-1791423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr13:620469-620249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr13:7333232-7332995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
41, 143
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr13:17159101-17158870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr13:39376298-39376529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 137
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr13:60509345-60509114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
27, 142
               

               
Conread position:
               
135-368
               

               
Cow position:
               
chr13:12045566-12045329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
42, 135
               

               
Conread position:
               
135-368
               

               
Cow position:
               
chr13:18973670-18973438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
135-368
               

               
Cow position:
               
chr13:21866852-21866618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
190, 109
               

               
Conread position:
               
135-368
               

               
Cow position:
               
chr13:25579410-25579181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
135-368
               

               
Cow position:
               
chr13:26093392-26093631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
41, 140
               

               
Conread position:
               
135-368
               

               
Cow position:
               
chr13:28552366-28552597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
135-369
               

               
Cow position:
               
chr13:48222769-48222538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
51, 138
               

               
Conread position:
               
135-370
               

               
Cow position:
               
chr13:4416888-4417122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
135-370
               

               
Cow position:
               
chr13:9587802-9587578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr13:9707967-9707738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr13:10925143-10924909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 127
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr13:13338638-13338868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr13:57436621-57436380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr13:61046986-61047227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:1155925-1155692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
41, 139
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:6616983-6616742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:14575995-14576222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:14879175-14878938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:15996816-15997046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:20579698-20579919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:26120592-26120348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 148
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:27550515-27550752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:29831647-29831420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:35526414-35526188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:41189881-41190118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 140
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:50646848-50646623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:52934208-52934440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:54145700-54145464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:54286940-54286716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:59461027-59461250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr13:62369443-62369681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr13:3315905-3315662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr13:12574408-12574654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr13:15349467-15349236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr13:17823170-17822942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr13:17855147-17855386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr13:19033335-19033569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr13:19364024-19364259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr13:20271454-20271211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
8, 139
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr13:24753673-24753900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr13:51940526-51940748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
135-376
               

               
Cow position:
               
chr13:18548481-18548721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 145
               

               
Conread position:
               
135-377
               

               
Cow position:
               
chr13:13320577-13320816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 90
               

               
Conread position:
               
136-275
               

               
Cow position:
               
chr13:3388011-3387868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
136-275
               

               
Cow position:
               
chr13:19182889-19182750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
136-308
               

               
Cow position:
               
chr13:20214215-20214388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 146
               

               
Conread position:
               
136-317
               

               
Cow position:
               
chr13:1339362-1339183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
136-340
               

               
Cow position:
               
chr13:37517406-37517196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
136-350
               

               
Cow position:
               
chr13:2776637-2776850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
43, 136
               

               
Conread position:
               
136-350
               

               
Cow position:
               
chr13:9899927-9900143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 143
               

               
Conread position:
               
136-355
               

               
Cow position:
               
chr13:45593704-45593913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
43, 87
               

               
Conread position:
               
136-365
               

               
Cow position:
               
chr13:20893862-20893629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
136-365
               

               
Cow position:
               
chr13:21275637-21275865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
136-368
               

               
Cow position:
               
chr13:24715030-24715251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
136-369
               

               
Cow position:
               
chr13:34261016-34261244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
136-371
               

               
Cow position:
               
chr13:6973943-6974172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 98
               

               
Conread position:
               
136-371
               

               
Cow position:
               
chr13:21981189-21980965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
136-372
               

               
Cow position:
               
chr13:18058464-18058238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
136-372
               

               
Cow position:
               
chr13:21127560-21127329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
136-372
               

               
Cow position:
               
chr13:27180818-27181053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 142
               

               
Conread position:
               
136-373
               

               
Cow position:
               
chr13:20314843-20314607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
137-271
               

               
Cow position:
               
chr13:43577769-43577907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
137-273
               

               
Cow position:
               
chr13:24292877-24292743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
137-304
               

               
Cow position:
               
chr13:17044407-17044574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
137-308
               

               
Cow position:
               
chr13:53619784-53619953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
137-309
               

               
Cow position:
               
chr13:46391137-46391305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
137-316
               

               
Cow position:
               
chr13:43576792-43576971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
137-331
               

               
Cow position:
               
chr13:21280718-21280525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
137-342
               

               
Cow position:
               
chr13:11823809-11823989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
137-343
               

               
Cow position:
               
chr13:42302260-42302056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
137-344
               

               
Cow position:
               
chr13:36345730-36345927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
137-361
               

               
Cow position:
               
chr13:12770411-12770185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
41, 142
               

               
Conread position:
               
137-365
               

               
Cow position:
               
chr13:15041692-15041467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
137-365
               

               
Cow position:
               
chr13:23805240-23805001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
137-365
               

               
Cow position:
               
chr13:52055810-52055586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
137-368
               

               
Cow position:
               
chr13:2773897-2774140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 143
               

               
Conread position:
               
137-368
               

               
Cow position:
               
chr13:16247426-16247666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
137-368
               

               
Cow position:
               
chr13:19883252-19883028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
137-368
               

               
Cow position:
               
chr13:20360057-20360288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
137-368
               

               
Cow position:
               
chr13:51695750-51695977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
137-371
               

               
Cow position:
               
chr13:43183026-43183261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 144
               

               
Conread position:
               
137-372
               

               
Cow position:
               
chr13:18166514-18166744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
137-372
               

               
Cow position:
               
chr13:25695984-25695756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
137-372
               

               
Cow position:
               
chr13:25817312-25817540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
137-372
               

               
Cow position:
               
chr13:33601447-33601220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
137-372
               

               
Cow position:
               
chr13:37584599-37584833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 144
               

               
Conread position:
               
137-372
               

               
Cow position:
               
chr13:52893930-52894160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
137-373
               

               
Cow position:
               
chr13:9846682-9846443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 138
               

               
Conread position:
               
137-373
               

               
Cow position:
               
chr13:11543342-11543593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
137-373
               

               
Cow position:
               
chr13:19188096-19188314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
137-373
               

               
Cow position:
               
chr13:20157511-20157744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
137-373
               

               
Cow position:
               
chr13:32282908-32283140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
137-377
               

               
Cow position:
               
chr13:12946151-12946389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
138-336
               

               
Cow position:
               
chr13:369342-369146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
138-340
               

               
Cow position:
               
chr13:13527191-13527000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
138-362
               

               
Cow position:
               
chr13:39826338-39826557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
138-365
               

               
Cow position:
               
chr13:7104442-7104660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
138-371
               

               
Cow position:
               
chr13:25978411-25978182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
139-306
               

               
Cow position:
               
chr13:6972164-6972330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
139-307
               

               
Cow position:
               
chr13:29665801-29665969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 137
               

               
Conread position:
               
139-334
               

               
Cow position:
               
chr13:390853-390667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
139-357
               

               
Cow position:
               
chr13:24796668-24796869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 7
               

               
Conread position:
               
139-365
               

               
Cow position:
               
chr13:6486470-6486245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
139-368
               

               
Cow position:
               
chr13:14016773-14016560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
139-368
               

               
Cow position:
               
chr13:38109948-38109717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 137
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr13:6860959-6861193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr13:8362963-8362738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 139
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr13:20174523-20174762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr13:21288300-21288072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr13:26480419-26480198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr13:54128814-54128584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
139-373
               

               
Cow position:
               
chr13:33875456-33875689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr13:5263495-5263267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr13:14795990-14796223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
140-275
               

               
Cow position:
               
chr13:39775705-39775564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
140-308
               

               
Cow position:
               
chr13:21955285-21955116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
36, 138
               

               
Conread position:
               
140-312
               

               
Cow position:
               
chr13:11231511-11231341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
140-312
               

               
Cow position:
               
chr13:13533877-13533712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr13:19177954-19178142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 141
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr13:23685218-23685035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
140-327
               

               
Cow position:
               
chr13:5092610-5092426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
140-330
               

               
Cow position:
               
chr13:25521139-25520944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 141
               

               
Conread position:
               
140-336
               

               
Cow position:
               
chr13:22046225-22046031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
155, 40
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr13:8393097-8392912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
140-348
               

               
Cow position:
               
chr13:30148770-30148574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
140-354
               

               
Cow position:
               
chr13:46525643-46525434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
37, 6
               

               
Conread position:
               
140-355
               

               
Cow position:
               
chr13:15061705-15061485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
140-355
               

               
Cow position:
               
chr13:30258633-30258847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
140-355
               

               
Cow position:
               
chr13:43595320-43595113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
36, 130
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr13:20534685-20534897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
140-365
               

               
Cow position:
               
chr13:33854896-33854679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
140-368
               

               
Cow position:
               
chr13:11820945-11821162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 92
               

               
Conread position:
               
140-368
               

               
Cow position:
               
chr13:11933821-11933594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
140-369
               

               
Cow position:
               
chr13:47243766-47243545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
39, 6
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr13:34873371-34873602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr13:46515844-46516073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr13:62007892-62008119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
140-373
               

               
Cow position:
               
chr13:7149713-7149499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 6
               

               
Conread position:
               
140-373
               

               
Cow position:
               
chr13:42200405-42200632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr13:25495794-25496023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
141-256
               

               
Cow position:
               
chr13:18874918-18875037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
141-264
               

               
Cow position:
               
chr13:26482997-26482870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
141-274
               

               
Cow position:
               
chr13:2529166-2529031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
141-275
               

               
Cow position:
               
chr13:15114253-15114391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
141-279
               

               
Cow position:
               
chr13:27230512-27230378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
141-287
               

               
Cow position:
               
chr13:23680594-23680744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
141-314
               

               
Cow position:
               
chr13:54128045-54127872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
141-319
               

               
Cow position:
               
chr13:55007984-55007810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
141-339
               

               
Cow position:
               
chr13:14210652-14210844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
141-342
               

               
Cow position:
               
chr13:3153533-3153733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
141-343
               

               
Cow position:
               
chr13:20042478-20042281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
38, 140
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr13:1462506-1462295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
141-365
               

               
Cow position:
               
chr13:20261548-20261316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
141-368
               

               
Cow position:
               
chr13:15193103-15192879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
141-368
               

               
Cow position:
               
chr13:18994913-18995132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
197, 34
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr13:22115461-22115707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
141-373
               

               
Cow position:
               
chr13:9906514-9906749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
141-373
               

               
Cow position:
               
chr13:13478895-13478661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
141-373
               

               
Cow position:
               
chr13:24215891-24215660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
142-304
               

               
Cow position:
               
chr13:31398244-31398404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
142-308
               

               
Cow position:
               
chr13:42203818-42203974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
142-312
               

               
Cow position:
               
chr13:20378530-20378367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
142-323
               

               
Cow position:
               
chr13:48126891-48127072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
142-342
               

               
Cow position:
               
chr13:11410495-11410697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
142-359
               

               
Cow position:
               
chr13:33256284-33256496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
142-360
               

               
Cow position:
               
chr13:37818958-37818753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
142-365
               

               
Cow position:
               
chr13:49356262-49356043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
142-368
               

               
Cow position:
               
chr13:44003486-44003708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
142-371
               

               
Cow position:
               
chr13:5758545-5758331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
142-371
               

               
Cow position:
               
chr13:37985961-37985733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
142-372
               

               
Cow position:
               
chr13:15993170-15993398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
142-372
               

               
Cow position:
               
chr13:48409155-48409391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
142-373
               

               
Cow position:
               
chr13:15289132-15288911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
142-377
               

               
Cow position:
               
chr13:16014590-16014831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
142-377
               

               
Cow position:
               
chr13:37593159-37592929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
143-308
               

               
Cow position:
               
chr13:16711134-16711298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
143-370
               

               
Cow position:
               
chr13:25926576-25926801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
145-275
               

               
Cow position:
               
chr13:24591384-24591517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
145-308
               

               
Cow position:
               
chr13:46298964-46298807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
145-312
               

               
Cow position:
               
chr13:40483190-40483025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
145-323
               

               
Cow position:
               
chr13:13780966-13781144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
145-355
               

               
Cow position:
               
chr13:42849340-42849137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
145-356
               

               
Cow position:
               
chr13:20845080-20844869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
32, 132
               

               
Conread position:
               
145-364
               

               
Cow position:
               
chr13:10989284-10989069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
145-368
               

               
Cow position:
               
chr13:14035209-14034986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
145-368
               

               
Cow position:
               
chr13:17350133-17350359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 133
               

               
Conread position:
               
145-368
               

               
Cow position:
               
chr13:24692748-24692965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
145-370
               

               
Cow position:
               
chr13:27525469-27525248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
145-371
               

               
Cow position:
               
chr13:20115034-20115265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
145-372
               

               
Cow position:
               
chr13:21171782-21171558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
145-373
               

               
Cow position:
               
chr13:2776074-2776301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
145-377
               

               
Cow position:
               
chr13:41157187-41157422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 140
               

               
Conread position:
               
146-337
               

               
Cow position:
               
chr13:6976050-6975867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
146-351
               

               
Cow position:
               
chr13:37803670-37803884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 137
               

               
Conread position:
               
146-371
               

               
Cow position:
               
chr13:26100179-26100405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
146-372
               

               
Cow position:
               
chr13:55494728-55494513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
146-373
               

               
Cow position:
               
chr13:48597700-48597922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
148-345
               

               
Cow position:
               
chr13:45675490-45675686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
149-368
               

               
Cow position:
               
chr13:50457645-50457867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
149-369
               

               
Cow position:
               
chr13:49393156-49392933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 120
               

               
Conread position:
               
150-363
               

               
Cow position:
               
chr13:26848036-26847814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
150-369
               

               
Cow position:
               
chr13:6442312-6442100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
151-312
               

               
Cow position:
               
chr13:9492572-9492724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
151-358
               

               
Cow position:
               
chr13:33974176-33973969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
151-371
               

               
Cow position:
               
chr13:35557315-35557100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
152-314
               

               
Cow position:
               
chr13:20520107-20520270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
152-373
               

               
Cow position:
               
chr13:33054576-33054360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
153-297
               

               
Cow position:
               
chr13:11439226-11439089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
153-328
               

               
Cow position:
               
chr13:16834738-16834561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
153-330
               

               
Cow position:
               
chr13:52027338-52027166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
153-352
               

               
Cow position:
               
chr13:37751268-37751074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
153-353
               

               
Cow position:
               
chr13:4404332-4404525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
153-362
               

               
Cow position:
               
chr13:15868907-15869126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
153-368
               

               
Cow position:
               
chr13:18340328-18340542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
153-369
               

               
Cow position:
               
chr13:11260075-11260276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
153-369
               

               
Cow position:
               
chr13:18615169-18615394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
26, 134
               

               
Conread position:
               
153-372
               

               
Cow position:
               
chr13:5279409-5279181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 144
               

               
Conread position:
               
154-275
               

               
Cow position:
               
chr13:21070804-21070929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
154-327
               

               
Cow position:
               
chr13:8537617-8537790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
154-330
               

               
Cow position:
               
chr13:24372155-24371974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
154-355
               

               
Cow position:
               
chr13:23214813-23215017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 122
               

               
Conread position:
               
154-368
               

               
Cow position:
               
chr13:50751253-50751047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
154-369
               

               
Cow position:
               
chr13:6926311-6926527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
25, 125
               

               
Conread position:
               
154-372
               

               
Cow position:
               
chr13:18929324-18929538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
154-372
               

               
Cow position:
               
chr13:49475870-49476098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
154-372
               

               
Cow position:
               
chr13:56958776-56958980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 121
               

               
Conread position:
               
154-374
               

               
Cow position:
               
chr13:8667414-8667632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
19, 123
               

               
Conread position:
               
155-365
               

               
Cow position:
               
chr13:33352565-33352345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 170
               

               
Conread position:
               
155-368
               

               
Cow position:
               
chr13:26261992-26261779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
156-275
               

               
Cow position:
               
chr13:8423202-8423325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
156-362
               

               
Cow position:
               
chr13:19779054-19778844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
156-368
               

               
Cow position:
               
chr13:6465882-6465681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
156-368
               

               
Cow position:
               
chr13:24155311-24155538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
157-374
               

               
Cow position:
               
chr13:52057360-52057573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
158-373
               

               
Cow position:
               
chr13:54389215-54389008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
160-372
               

               
Cow position:
               
chr13:51015379-51015166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 118
               

               
Conread position:
               
162-358
               

               
Cow position:
               
chr13:38703068-38702877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
151, 60
               

               
Conread position:
               
162-371
               

               
Cow position:
               
chr13:20250708-20250922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
169-353
               

               
Cow position:
               
chr13:8408436-8408617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
171-340
               

               
Cow position:
               
chr13:17716698-17716533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
175-360
               

               
Cow position:
               
chr13:7190791-7190968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
175-365
               

               
Cow position:
               
chr13:6663932-6663747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
175-371
               

               
Cow position:
               
chr13:52637121-52637312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr13:15083485-15083671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr13:19876513-19876318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
175-373
               

               
Cow position:
               
chr13:42229125-42229322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
176-352
               

               
Cow position:
               
chr13:17058025-17057855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
176-368
               

               
Cow position:
               
chr13:23478853-23479039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
176-368
               

               
Cow position:
               
chr13:25547761-25547573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
176-372
               

               
Cow position:
               
chr13:20666561-20666377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
176-373
               

               
Cow position:
               
chr13:24230034-24230228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 96
               

               
Conread position:
               
177-349
               

               
Cow position:
               
chr13:47227543-47227369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
177-364
               

               
Cow position:
               
chr13:43919440-43919256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 97
               

               
Conread position:
               
177-365
               

               
Cow position:
               
chr13:43893508-43893316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
183-351
               

               
Cow position:
               
chr13:37980927-37980766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
183-372
               

               
Cow position:
               
chr13:20288480-20288663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
120, 47
               

               
Conread position:
               
192-372
               

               
Cow position:
               
chr13:37503745-37503574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
195-355
               

               
Cow position:
               
chr13:17464442-17464599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
196-371
               

               
Cow position:
               
chr13:51814087-51813925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-342
               

               
Cow position:
               
chr13:6608542-6608399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
201-365
               

               
Cow position:
               
chr13:48554212-48554371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
203-350
               

               
Cow position:
               
chr13:9884382-9884526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
145, 65
               

               
Conread position:
               
204-361
               

               
Cow position:
               
chr13:23167252-23167099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
204-365
               

               
Cow position:
               
chr13:26369373-26369529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
204-368
               

               
Cow position:
               
chr13:19750564-19750724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
204-369
               

               
Cow position:
               
chr13:2413880-2414039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr13:12925628-12925788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr13:14771301-14771464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr13:60430228-60430063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
205-363
               

               
Cow position:
               
chr13:185380-185534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
205-368
               

               
Cow position:
               
chr13:11643789-11643948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
205-373
               

               
Cow position:
               
chr13:17837801-17837963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
206-365
               

               
Cow position:
               
chr13:15282083-15281934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
207-364
               

               
Cow position:
               
chr13:55727754-55727907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
207-367
               

               
Cow position:
               
chr13:12547056-12546900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr13:17316752-17316915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
116, 69
               

               
Conread position:
               
207-373
               

               
Cow position:
               
chr13:3211400-3211563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
207-373
               

               
Cow position:
               
chr13:49520971-49520807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
207-373
               

               
Cow position:
               
chr13:56148373-56148537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
207-373
               

               
Cow position:
               
chr13:56160594-56160430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
208-369
               

               
Cow position:
               
chr13:24110333-24110490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
208-372
               

               
Cow position:
               
chr13:8609694-8609534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 69
               

               
Conread position:
               
209-372
               

               
Cow position:
               
chr13:42640240-42640394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
209-372
               

               
Cow position:
               
chr13:51901438-51901600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr13:51116169-51116010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
210-369
               

               
Cow position:
               
chr13:21294930-21295087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
110, 66
               

               
Conread position:
               
212-374
               

               
Cow position:
               
chr13:36666417-36666259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr13:6342228-6342076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
216-372
               

               
Cow position:
               
chr13:20231329-20231180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
217-372
               

               
Cow position:
               
chr13:21283842-21283692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
223-365
               

               
Cow position:
               
chr13:43829112-43829250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
223-377
               

               
Cow position:
               
chr13:51857017-51856868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
224-365
               

               
Cow position:
               
chr13:39367828-39367969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
228-369
               

               
Cow position:
               
chr13:20519934-20520071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
231-365
               

               
Cow position:
               
chr13:8652567-8652436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
235-372
               

               
Cow position:
               
chr13:18516926-18517057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               
Show alignments to all cow chromosomes.