Non-Coding RNA Search

Cow genome map


           Conread name:
           rnmm21c_n23.y1
        

               Conread position:
               80-356
               

               Cow position:
               chr21:26034153-26033879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               96, 23
               

               Conread position:
               85-372
               

               Cow position:
               chr21:8426757-8426482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 28
               

               Conread position:
               105-372
               

               Cow position:
               chr21:957970-957709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               5, 121
               

               Conread position:
               107-328
               

               Cow position:
               chr21:27744326-27744105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               66, 10
               

               Conread position:
               107-347
               

               Cow position:
               chr21:13985889-13985647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 171
               

               Conread position:
               107-373
               

               Cow position:
               chr21:742573-742323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               108-349
               

               Cow position:
               chr21:40059314-40059087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               111-371
               

               Cow position:
               chr21:14464877-14464618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               112-351
               

               Cow position:
               chr21:13090669-13090431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               67, 34
               

               Conread position:
               112-351
               

               Cow position:
               chr21:26392223-26391981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 167
               

               Conread position:
               112-362
               

               Cow position:
               chr21:10070631-10070887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               67, 33
               

               Conread position:
               113-377
               

               Cow position:
               chr21:41974074-41974344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               35, 171
               

               Conread position:
               114-372
               

               Cow position:
               chr21:4281593-4281838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               116-331
               

               Cow position:
               chr21:24757225-24757018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               116-331
               

               Cow position:
               chr21:37360951-37361165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 35
               

               Conread position:
               116-368
               

               Cow position:
               chr21:13960976-13960728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               61, 129
               

               Conread position:
               116-372
               

               Cow position:
               chr21:43693106-43692852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               117-342
               

               Cow position:
               chr21:21769369-21769150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               117-355
               

               Cow position:
               chr21:3178133-3177894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               59, 69
               

               Conread position:
               117-372
               

               Cow position:
               chr21:12310760-12310513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               118-269
               

               Cow position:
               chr21:42227409-42227564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               118-332
               

               Cow position:
               chr21:18450041-18449829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               57, 27
               

               Conread position:
               119-273
               

               Cow position:
               chr21:30359064-30359216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               60, 105
               

               Conread position:
               119-275
               

               Cow position:
               chr21:58734-58572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               119-368
               

               Cow position:
               chr21:30255972-30256229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               119-371
               

               Cow position:
               chr21:38918487-38918241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               58, 14
               

               Conread position:
               119-372
               

               Cow position:
               chr21:13589048-13588799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 129
               

               Conread position:
               119-372
               

               Cow position:
               chr21:13753158-13752910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               119-372
               

               Cow position:
               chr21:17455669-17455423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               119-373
               

               Cow position:
               chr21:13713550-13713805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 172
               

               Conread position:
               120-365
               

               Cow position:
               chr21:17432984-17433226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 118
               

               Conread position:
               120-372
               

               Cow position:
               chr21:41621410-41621162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               121-304
               

               Cow position:
               chr21:42047757-42047938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               121-332
               

               Cow position:
               chr21:15305011-15305223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 90
               

               Conread position:
               121-372
               

               Cow position:
               chr21:40475785-40475537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 156
               

               Conread position:
               122-314
               

               Cow position:
               chr21:42905119-42905304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               122-352
               

               Cow position:
               chr21:9301507-9301279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               122-368
               

               Cow position:
               chr21:22005620-22005869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               54, 152
               

               Conread position:
               122-374
               

               Cow position:
               chr21:45970894-45971139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               8, 98
               

               Conread position:
               123-272
               

               Cow position:
               chr21:40821613-40821763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               123-275
               

               Cow position:
               chr21:7535268-7535417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               123-326
               

               Cow position:
               chr21:19220514-19220716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               123-341
               

               Cow position:
               chr21:26828689-26828904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 154
               

               Conread position:
               123-343
               

               Cow position:
               chr21:38482664-38482448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               56, 91
               

               Conread position:
               123-349
               

               Cow position:
               chr21:27521060-27521278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               56, 39
               

               Conread position:
               123-371
               

               Cow position:
               chr21:10004602-10004847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               123-372
               

               Cow position:
               chr21:8545736-8545981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               123-372
               

               Cow position:
               chr21:21907159-21907391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               43, 91
               

               Conread position:
               123-372
               

               Cow position:
               chr21:31759942-31760176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 117
               

               Conread position:
               123-372
               

               Cow position:
               chr21:36682606-36682362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               88, 24
               

               Conread position:
               124-341
               

               Cow position:
               chr21:20925184-20925410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               126-368
               

               Cow position:
               chr21:23606947-23606714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               8, 89
               

               Conread position:
               127-340
               

               Cow position:
               chr21:17410077-17410281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               127-369
               

               Cow position:
               chr21:976873-977109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               139, 13
               

               Conread position:
               127-372
               

               Cow position:
               chr21:31279530-31279293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               127-373
               

               Cow position:
               chr21:21969092-21968846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               127-374
               

               Cow position:
               chr21:17418804-17419047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               54, 141
               

               Conread position:
               127-374
               

               Cow position:
               chr21:30835645-30835401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               11, 149
               

               Conread position:
               128-319
               

               Cow position:
               chr21:45446817-45446624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               15, 156
               

               Conread position:
               128-349
               

               Cow position:
               chr21:48482255-48482469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               128-372
               

               Cow position:
               chr21:643597-643362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 88
               

               Conread position:
               129-352
               

               Cow position:
               chr21:6154078-6153857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               9, 146
               

               Conread position:
               129-355
               

               Cow position:
               chr21:27711956-27712190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               130-244
               

               Cow position:
               chr21:46627514-46627398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               130-266
               

               Cow position:
               chr21:40593492-40593356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               130-275
               

               Cow position:
               chr21:34209739-34209887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               130-295
               

               Cow position:
               chr21:19339955-19340119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 94
               

               Conread position:
               130-304
               

               Cow position:
               chr21:19176518-19176346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               130-316
               

               Cow position:
               chr21:19083311-19083495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               130-321
               

               Cow position:
               chr21:1464617-1464430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               130-321
               

               Cow position:
               chr21:3135593-3135782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               46, 145
               

               Conread position:
               130-321
               

               Cow position:
               chr21:27568159-27567981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               130-330
               

               Cow position:
               chr21:7539253-7539450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               130-337
               

               Cow position:
               chr21:8986301-8986093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               46, 149
               

               Conread position:
               130-340
               

               Cow position:
               chr21:36280568-36280358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               49, 147
               

               Conread position:
               130-344
               

               Cow position:
               chr21:17910981-17911203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               130-348
               

               Cow position:
               chr21:20174585-20174378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               130-349
               

               Cow position:
               chr21:5406087-5405875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               130-352
               

               Cow position:
               chr21:31658880-31659091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               130-354
               

               Cow position:
               chr21:16604040-16604263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               47, 10
               

               Conread position:
               130-354
               

               Cow position:
               chr21:41590293-41590511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               47, 17
               

               Conread position:
               130-355
               

               Cow position:
               chr21:641860-641640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               17, 89
               

               Conread position:
               130-355
               

               Cow position:
               chr21:37928926-37928702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 146
               

               Conread position:
               130-360
               

               Cow position:
               chr21:39319134-39319362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               8, 144
               

               Conread position:
               130-362
               

               Cow position:
               chr21:10817309-10817077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 151
               

               Conread position:
               130-362
               

               Cow position:
               chr21:17512047-17511822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               130-362
               

               Cow position:
               chr21:24060917-24061145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               130-365
               

               Cow position:
               chr21:8430821-8431057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               11, 147
               

               Conread position:
               130-368
               

               Cow position:
               chr21:17559642-17559889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               130-368
               

               Cow position:
               chr21:41156145-41155905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               130-369
               

               Cow position:
               chr21:23587144-23586921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               49, 10
               

               Conread position:
               130-370
               

               Cow position:
               chr21:10009541-10009785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 145
               

               Conread position:
               130-371
               

               Cow position:
               chr21:9416516-9416288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               173, 44
               

               Conread position:
               130-372
               

               Cow position:
               chr21:19703004-19702766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               130-372
               

               Cow position:
               chr21:28919255-28919486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               130-372
               

               Cow position:
               chr21:37299734-37299497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               130-373
               

               Cow position:
               chr21:10148273-10148026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               130-374
               

               Cow position:
               chr21:15584149-15584384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               130-374
               

               Cow position:
               chr21:16794067-16793823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               132-365
               

               Cow position:
               chr21:11779265-11779493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               47, 146
               

               Conread position:
               132-372
               

               Cow position:
               chr21:40899615-40899375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               133-322
               

               Cow position:
               chr21:40551470-40551659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 144
               

               Conread position:
               133-330
               

               Cow position:
               chr21:10072438-10072242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 112
               

               Conread position:
               133-343
               

               Cow position:
               chr21:27409466-27409667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               133-347
               

               Cow position:
               chr21:21940139-21940346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 86
               

               Conread position:
               133-363
               

               Cow position:
               chr21:40291482-40291701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               133-364
               

               Cow position:
               chr21:18341491-18341262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               43, 140
               

               Conread position:
               133-372
               

               Cow position:
               chr21:16498785-16498556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               133-372
               

               Cow position:
               chr21:17184192-17183959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               13, 75
               

               Conread position:
               133-372
               

               Cow position:
               chr21:38449181-38449408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               133-373
               

               Cow position:
               chr21:13089198-13089432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               6, 42
               

               Conread position:
               133-373
               

               Cow position:
               chr21:17519300-17519056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 147
               

               Conread position:
               134-308
               

               Cow position:
               chr21:32536662-32536496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               134-339
               

               Cow position:
               chr21:13883748-13883550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               142, 42
               

               Conread position:
               134-344
               

               Cow position:
               chr21:29418843-29418636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 144
               

               Conread position:
               134-365
               

               Cow position:
               chr21:27863248-27863470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               41, 84
               

               Conread position:
               134-372
               

               Cow position:
               chr21:6713254-6713490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               134-372
               

               Cow position:
               chr21:42145090-42144863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               134-373
               

               Cow position:
               chr21:29658544-29658312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               135-261
               

               Cow position:
               chr21:12293294-12293164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               135-269
               

               Cow position:
               chr21:41829109-41829246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               135-275
               

               Cow position:
               chr21:16099290-16099436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               135-297
               

               Cow position:
               chr21:12473792-12473949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 98
               

               Conread position:
               135-298
               

               Cow position:
               chr21:5345151-5344988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               44, 141
               

               Conread position:
               135-304
               

               Cow position:
               chr21:39788269-39788435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               41, 100
               

               Conread position:
               135-312
               

               Cow position:
               chr21:45537460-45537280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 142
               

               Conread position:
               135-316
               

               Cow position:
               chr21:9873590-9873409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               135-321
               

               Cow position:
               chr21:874795-874609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               42, 141
               

               Conread position:
               135-321
               

               Cow position:
               chr21:13134866-13134688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               135-323
               

               Cow position:
               chr21:31278458-31278268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               42, 129
               

               Conread position:
               135-327
               

               Cow position:
               chr21:16797121-16796932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               135-329
               

               Cow position:
               chr21:30970205-30970014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               44, 92
               

               Conread position:
               135-330
               

               Cow position:
               chr21:10656831-10657025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 120
               

               Conread position:
               135-333
               

               Cow position:
               chr21:10751316-10751119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               41, 141
               

               Conread position:
               135-333
               

               Cow position:
               chr21:20193243-20193045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               42, 141
               

               Conread position:
               135-335
               

               Cow position:
               chr21:14247406-14247208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               42, 113
               

               Conread position:
               135-336
               

               Cow position:
               chr21:34737431-34737238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               135-337
               

               Cow position:
               chr21:4109046-4108846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               135-338
               

               Cow position:
               chr21:6292017-6291816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               135-338
               

               Cow position:
               chr21:15869956-15869760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               135-343
               

               Cow position:
               chr21:22211526-22211318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 144
               

               Conread position:
               135-345
               

               Cow position:
               chr21:28882453-28882241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               44, 93
               

               Conread position:
               135-351
               

               Cow position:
               chr21:16895676-16895471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               42, 88
               

               Conread position:
               135-353
               

               Cow position:
               chr21:13817667-13817447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 138
               

               Conread position:
               135-353
               

               Cow position:
               chr21:17842725-17842942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               135-354
               

               Cow position:
               chr21:13304065-13303846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 140
               

               Conread position:
               135-354
               

               Cow position:
               chr21:17155678-17155898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               40, 142
               

               Conread position:
               135-355
               

               Cow position:
               chr21:10130417-10130197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 141
               

               Conread position:
               135-355
               

               Cow position:
               chr21:11182818-11182606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               135-355
               

               Cow position:
               chr21:12541127-12541346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               42, 141
               

               Conread position:
               135-355
               

               Cow position:
               chr21:18155294-18155513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               41, 65
               

               Conread position:
               135-355
               

               Cow position:
               chr21:19059821-19060037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 93
               

               Conread position:
               135-355
               

               Cow position:
               chr21:25012347-25012135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               135-358
               

               Cow position:
               chr21:41043047-41043269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 104
               

               Conread position:
               135-360
               

               Cow position:
               chr21:18720835-18721057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               42, 141
               

               Conread position:
               135-360
               

               Cow position:
               chr21:36022917-36023143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 147
               

               Conread position:
               135-362
               

               Cow position:
               chr21:31652657-31652434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               44, 142
               

               Conread position:
               135-364
               

               Cow position:
               chr21:6051774-6051547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               135-365
               

               Cow position:
               chr21:18059690-18059918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               135-365
               

               Cow position:
               chr21:30938396-30938629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               41, 73
               

               Conread position:
               135-368
               

               Cow position:
               chr21:17403576-17403810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               30, 143
               

               Conread position:
               135-369
               

               Cow position:
               chr21:10743659-10743426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               42, 146
               

               Conread position:
               135-369
               

               Cow position:
               chr21:33982545-33982768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               135-369
               

               Cow position:
               chr21:36508500-36508277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               43, 87
               

               Conread position:
               135-369
               

               Cow position:
               chr21:38901033-38900813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               44, 78
               

               Conread position:
               135-370
               

               Cow position:
               chr21:802055-802279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               135-370
               

               Cow position:
               chr21:13047920-13048154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 141
               

               Conread position:
               135-372
               

               Cow position:
               chr21:10859080-10858844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 137
               

               Conread position:
               135-372
               

               Cow position:
               chr21:11174514-11174275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 131
               

               Conread position:
               135-372
               

               Cow position:
               chr21:11755494-11755729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               41, 75
               

               Conread position:
               135-372
               

               Cow position:
               chr21:12461699-12461930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 90
               

               Conread position:
               135-372
               

               Cow position:
               chr21:13840598-13840363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 137
               

               Conread position:
               135-372
               

               Cow position:
               chr21:16152710-16152477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               38, 83
               

               Conread position:
               135-372
               

               Cow position:
               chr21:17638165-17637928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               42, 145
               

               Conread position:
               135-372
               

               Cow position:
               chr21:18471844-18471614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 141
               

               Conread position:
               135-372
               

               Cow position:
               chr21:20163978-20163744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               27, 90
               

               Conread position:
               135-372
               

               Cow position:
               chr21:20165909-20165679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               135-372
               

               Cow position:
               chr21:24342995-24343231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               42, 109
               

               Conread position:
               135-372
               

               Cow position:
               chr21:25345134-25344898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               44, 141
               

               Conread position:
               135-372
               

               Cow position:
               chr21:27677752-27677519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               135-372
               

               Cow position:
               chr21:36763331-36763099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               135-372
               

               Cow position:
               chr21:40266394-40266162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 145
               

               Conread position:
               135-372
               

               Cow position:
               chr21:42501321-42501080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               40, 11
               

               Conread position:
               135-372
               

               Cow position:
               chr21:42841315-42841561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               44, 156
               

               Conread position:
               135-373
               

               Cow position:
               chr21:3763482-3763706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               135-373
               

               Cow position:
               chr21:9278798-9278557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 137
               

               Conread position:
               135-373
               

               Cow position:
               chr21:12322768-12322539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 79
               

               Conread position:
               135-373
               

               Cow position:
               chr21:19561294-19561533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               135-373
               

               Cow position:
               chr21:20318782-20318549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               71, 34
               

               Conread position:
               135-373
               

               Cow position:
               chr21:44251571-44251807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 142
               

               Conread position:
               135-375
               

               Cow position:
               chr21:5218976-5218735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               136-311
               

               Cow position:
               chr21:29011707-29011876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 89
               

               Conread position:
               136-354
               

               Cow position:
               chr21:15012698-15012493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               136-354
               

               Cow position:
               chr21:49699768-49699986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               39, 136
               

               Conread position:
               136-361
               

               Cow position:
               chr21:32339476-32339693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               43, 65
               

               Conread position:
               136-365
               

               Cow position:
               chr21:46848865-46849084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               136-368
               

               Cow position:
               chr21:11739854-11740079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               136-371
               

               Cow position:
               chr21:23979910-23980144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               37, 141
               

               Conread position:
               136-372
               

               Cow position:
               chr21:19958485-19958251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 129
               

               Conread position:
               136-372
               

               Cow position:
               chr21:40589210-40589447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 89
               

               Conread position:
               136-373
               

               Cow position:
               chr21:6998210-6997976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 70
               

               Conread position:
               136-373
               

               Cow position:
               chr21:45835122-45835368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               137-326
               

               Cow position:
               chr21:36121497-36121309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               42, 142
               

               Conread position:
               137-334
               

               Cow position:
               chr21:10138207-10138009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 141
               

               Conread position:
               137-350
               

               Cow position:
               chr21:34738839-34738635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               184, 83
               

               Conread position:
               137-362
               

               Cow position:
               chr21:31701677-31701912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               137-365
               

               Cow position:
               chr21:5427195-5426983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               137-365
               

               Cow position:
               chr21:13580683-13580456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               42, 106
               

               Conread position:
               137-365
               

               Cow position:
               chr21:38720517-38720295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               42, 57
               

               Conread position:
               137-368
               

               Cow position:
               chr21:34001-33759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               42, 151
               

               Conread position:
               137-371
               

               Cow position:
               chr21:71852-71625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               137-372
               

               Cow position:
               chr21:6834318-6834085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               43, 99
               

               Conread position:
               137-372
               

               Cow position:
               chr21:15271171-15271411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               137-372
               

               Cow position:
               chr21:16915048-16914807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               137-372
               

               Cow position:
               chr21:26562890-26563125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               11, 100
               

               Conread position:
               137-373
               

               Cow position:
               chr21:8713689-8713923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               39, 140
               

               Conread position:
               137-373
               

               Cow position:
               chr21:18568369-18568604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 91
               

               Conread position:
               137-373
               

               Cow position:
               chr21:26018648-26018414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               138-274
               

               Cow position:
               chr21:48204951-48205091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               138-328
               

               Cow position:
               chr21:41738175-41737988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               39, 59
               

               Conread position:
               138-329
               

               Cow position:
               chr21:10660625-10660814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               37, 7
               

               Conread position:
               138-371
               

               Cow position:
               chr21:41610445-41610205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               31, 7
               

               Conread position:
               138-373
               

               Cow position:
               chr21:14452500-14452268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 135
               

               Conread position:
               139-355
               

               Cow position:
               chr21:700523-700739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               38, 136
               

               Conread position:
               139-355
               

               Cow position:
               chr21:3415923-3415707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 90
               

               Conread position:
               139-355
               

               Cow position:
               chr21:12916154-12916368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               40, 8
               

               Conread position:
               139-367
               

               Cow position:
               chr21:13757291-13757065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 124
               

               Conread position:
               139-369
               

               Cow position:
               chr21:1562264-1562502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 146
               

               Conread position:
               139-369
               

               Cow position:
               chr21:13584786-13585020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               41, 149
               

               Conread position:
               139-372
               

               Cow position:
               chr21:47313-47076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               34, 137
               

               Conread position:
               139-372
               

               Cow position:
               chr21:7768692-7768475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               139-372
               

               Cow position:
               chr21:37706146-37706378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 138
               

               Conread position:
               139-372
               

               Cow position:
               chr21:41287530-41287756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               40, 77
               

               Conread position:
               140-336
               

               Cow position:
               chr21:874589-874393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               37, 136
               

               Conread position:
               140-338
               

               Cow position:
               chr21:646050-646247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               39, 113
               

               Conread position:
               140-343
               

               Cow position:
               chr21:12349033-12348830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               33, 137
               

               Conread position:
               140-347
               

               Cow position:
               chr21:43655967-43655763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 78
               

               Conread position:
               140-365
               

               Cow position:
               chr21:13674385-13674609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               34, 136
               

               Conread position:
               140-372
               

               Cow position:
               chr21:868653-868889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               8, 138
               

               Conread position:
               140-372
               

               Cow position:
               chr21:32297243-32297482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               40, 148
               

               Conread position:
               140-372
               

               Cow position:
               chr21:38728421-38728190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 88
               

               Conread position:
               140-372
               

               Cow position:
               chr21:40432729-40432482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               140-372
               

               Cow position:
               chr21:47363460-47363699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 6
               

               Conread position:
               140-373
               

               Cow position:
               chr21:44724111-44724333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               141-333
               

               Cow position:
               chr21:24351115-24350927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               24, 140
               

               Conread position:
               141-339
               

               Cow position:
               chr21:42189496-42189688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 89
               

               Conread position:
               141-346
               

               Cow position:
               chr21:745434-745238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               141-350
               

               Cow position:
               chr21:17531399-17531187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               35, 139
               

               Conread position:
               141-352
               

               Cow position:
               chr21:41522149-41522356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               141-355
               

               Cow position:
               chr21:17252712-17252925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               6, 97
               

               Conread position:
               141-362
               

               Cow position:
               chr21:13462981-13462760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               177, 7
               

               Conread position:
               141-365
               

               Cow position:
               chr21:13225981-13225758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               141-365
               

               Cow position:
               chr21:41140451-41140674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 134
               

               Conread position:
               141-365
               

               Cow position:
               chr21:46612540-46612751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               141-370
               

               Cow position:
               chr21:2536872-2537101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               38, 139
               

               Conread position:
               141-372
               

               Cow position:
               chr21:3585100-3585331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               40, 141
               

               Conread position:
               141-372
               

               Cow position:
               chr21:28244731-28244508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               38, 75
               

               Conread position:
               141-372
               

               Cow position:
               chr21:29014653-29014873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 75
               

               Conread position:
               142-300
               

               Cow position:
               chr21:19236705-19236862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               142-328
               

               Cow position:
               chr21:11006505-11006691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               37, 106
               

               Conread position:
               142-352
               

               Cow position:
               chr21:24296502-24296712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               32, 115
               

               Conread position:
               142-352
               

               Cow position:
               chr21:38943345-38943563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 35
               

               Conread position:
               142-358
               

               Cow position:
               chr21:82322-82117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               142-362
               

               Cow position:
               chr21:13656371-13656590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 114
               

               Conread position:
               142-365
               

               Cow position:
               chr21:31246534-31246307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 137
               

               Conread position:
               142-366
               

               Cow position:
               chr21:30592051-30592262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               142-368
               

               Cow position:
               chr21:10264298-10264073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 114
               

               Conread position:
               142-369
               

               Cow position:
               chr21:17874927-17875154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               37, 135
               

               Conread position:
               142-372
               

               Cow position:
               chr21:17890566-17890339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               142-372
               

               Cow position:
               chr21:17983234-17983016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               142-372
               

               Cow position:
               chr21:23568488-23568261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 67
               

               Conread position:
               142-373
               

               Cow position:
               chr21:20153220-20152991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 114
               

               Conread position:
               142-373
               

               Cow position:
               chr21:23535976-23535747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               37, 135
               

               Conread position:
               143-360
               

               Cow position:
               chr21:28907287-28907496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               144-336
               

               Cow position:
               chr21:18783205-18783397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               144-355
               

               Cow position:
               chr21:24875613-24875405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 84
               

               Conread position:
               144-368
               

               Cow position:
               chr21:21686678-21686458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               34, 122
               

               Conread position:
               145-325
               

               Cow position:
               chr21:41437872-41437691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 133
               

               Conread position:
               145-354
               

               Cow position:
               chr21:17516070-17515862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 131
               

               Conread position:
               145-372
               

               Cow position:
               chr21:24797915-24797693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               31, 91
               

               Conread position:
               145-373
               

               Cow position:
               chr21:22718523-22718747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               145-377
               

               Cow position:
               chr21:44829496-44829728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 136
               

               Conread position:
               146-298
               

               Cow position:
               chr21:15444823-15444975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               30, 131
               

               Conread position:
               146-321
               

               Cow position:
               chr21:37495685-37495859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 60
               

               Conread position:
               146-365
               

               Cow position:
               chr21:22209984-22210203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 94
               

               Conread position:
               146-372
               

               Cow position:
               chr21:11353323-11353099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 129
               

               Conread position:
               146-372
               

               Cow position:
               chr21:30231437-30231657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               33, 119
               

               Conread position:
               146-372
               

               Cow position:
               chr21:31159645-31159439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               146-373
               

               Cow position:
               chr21:20213512-20213742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               30, 136
               

               Conread position:
               147-342
               

               Cow position:
               chr21:14228638-14228836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               31, 6
               

               Conread position:
               147-371
               

               Cow position:
               chr21:17193490-17193713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               32, 79
               

               Conread position:
               147-373
               

               Cow position:
               chr21:11644708-11644930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               149-266
               

               Cow position:
               chr21:34727460-34727339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               149-339
               

               Cow position:
               chr21:11743237-11743435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               27, 136
               

               Conread position:
               149-368
               

               Cow position:
               chr21:46809508-46809731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               149-372
               

               Cow position:
               chr21:1511542-1511330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 59
               

               Conread position:
               150-335
               

               Cow position:
               chr21:32647931-32648116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               29, 127
               

               Conread position:
               150-373
               

               Cow position:
               chr21:9311310-9311081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               24, 129
               

               Conread position:
               150-374
               

               Cow position:
               chr21:12739343-12739115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 119
               

               Conread position:
               151-273
               

               Cow position:
               chr21:37014171-37014297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               151-321
               

               Cow position:
               chr21:16119908-16120073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               151-345
               

               Cow position:
               chr21:14746026-14745833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               25, 120
               

               Conread position:
               151-371
               

               Cow position:
               chr21:20160932-20160714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 125
               

               Conread position:
               151-372
               

               Cow position:
               chr21:28030533-28030326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               152-368
               

               Cow position:
               chr21:11625999-11625783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 126
               

               Conread position:
               152-368
               

               Cow position:
               chr21:29069070-29069287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 123
               

               Conread position:
               153-314
               

               Cow position:
               chr21:34723063-34722903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 121
               

               Conread position:
               153-372
               

               Cow position:
               chr21:44565477-44565680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               16, 54
               

               Conread position:
               153-373
               

               Cow position:
               chr21:24858568-24858350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 66
               

               Conread position:
               154-275
               

               Cow position:
               chr21:42441881-42441756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               154-305
               

               Cow position:
               chr21:31258720-31258569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               20, 123
               

               Conread position:
               154-339
               

               Cow position:
               chr21:42017350-42017534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 35
               

               Conread position:
               154-343
               

               Cow position:
               chr21:8351043-8351230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               154-361
               

               Cow position:
               chr21:19161966-19161759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 123
               

               Conread position:
               154-361
               

               Cow position:
               chr21:28237448-28237659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 130
               

               Conread position:
               154-368
               

               Cow position:
               chr21:34151827-34151626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               154-369
               

               Cow position:
               chr21:10114082-10114291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               154-372
               

               Cow position:
               chr21:6317434-6317646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 114
               

               Conread position:
               154-372
               

               Cow position:
               chr21:24266310-24266528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               25, 124
               

               Conread position:
               155-275
               

               Cow position:
               chr21:47784845-47784721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               155-371
               

               Cow position:
               chr21:7066135-7066343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               157-331
               

               Cow position:
               chr21:39681384-39681213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               19, 117
               

               Conread position:
               157-337
               

               Cow position:
               chr21:5214600-5214419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 124
               

               Conread position:
               159-372
               

               Cow position:
               chr21:31253779-31253573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               160-372
               

               Cow position:
               chr21:10978702-10978911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 84
               

               Conread position:
               169-363
               

               Cow position:
               chr21:49276370-49276178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 104
               

               Conread position:
               169-365
               

               Cow position:
               chr21:7221117-7221297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               173-372
               

               Cow position:
               chr21:42007231-42007426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               197, 98
               

               Conread position:
               173-373
               

               Cow position:
               chr21:42463464-42463653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               174-360
               

               Cow position:
               chr21:27145762-27145944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               70, 6
               

               Conread position:
               174-372
               

               Cow position:
               chr21:17642762-17642947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               174-372
               

               Cow position:
               chr21:19259043-19258859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               174-372
               

               Cow position:
               chr21:47763890-47764080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               175-358
               

               Cow position:
               chr21:14360594-14360415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               175-365
               

               Cow position:
               chr21:3360790-3360970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               123, 40
               

               Conread position:
               175-365
               

               Cow position:
               chr21:6735967-6736146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               175-368
               

               Cow position:
               chr21:28191575-28191396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               175-372
               

               Cow position:
               chr21:6624385-6624194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               175-372
               

               Cow position:
               chr21:7377697-7377889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               175-372
               

               Cow position:
               chr21:10410449-10410262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               175-374
               

               Cow position:
               chr21:8242141-8241947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               177-377
               

               Cow position:
               chr21:36795827-36795634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               179-373
               

               Cow position:
               chr21:41579977-41579792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               183-372
               

               Cow position:
               chr21:21169275-21169456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               185-371
               

               Cow position:
               chr21:9990727-9990549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               185-371
               

               Cow position:
               chr21:45329738-45329910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               175, 25
               

               Conread position:
               203-371
               

               Cow position:
               chr21:28924309-28924147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               203-371
               

               Cow position:
               chr21:40168425-40168587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               203-372
               

               Cow position:
               chr21:37344899-37345062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 71
               

               Conread position:
               204-331
               

               Cow position:
               chr21:16927905-16928029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               90, 73
               

               Conread position:
               204-364
               

               Cow position:
               chr21:10538055-10538211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               204-371
               

               Cow position:
               chr21:10633441-10633599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               204-372
               

               Cow position:
               chr21:26245114-26244950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               204-372
               

               Cow position:
               chr21:42384709-42384545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               204-372
               

               Cow position:
               chr21:46470383-46470222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               204-373
               

               Cow position:
               chr21:7681298-7681134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               204-373
               

               Cow position:
               chr21:13164059-13163894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               205-372
               

               Cow position:
               chr21:30119893-30119731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               205-372
               

               Cow position:
               chr21:44592009-44592172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 68
               

               Conread position:
               206-337
               

               Cow position:
               chr21:42131157-42131284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               206-370
               

               Cow position:
               chr21:9334688-9334526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               207-368
               

               Cow position:
               chr21:23321881-23322038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               207-371
               

               Cow position:
               chr21:2658006-2657846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               207-372
               

               Cow position:
               chr21:1591744-1591590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               207-373
               

               Cow position:
               chr21:10118763-10118595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 144
               

               Conread position:
               207-377
               

               Cow position:
               chr21:3400635-3400801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               141, 69
               

               Conread position:
               208-372
               

               Cow position:
               chr21:713139-712979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               88, 71
               

               Conread position:
               209-372
               

               Cow position:
               chr21:41598006-41597848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               210-355
               

               Cow position:
               chr21:8978641-8978502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               217-369
               

               Cow position:
               chr21:7584037-7583889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               217-372
               

               Cow position:
               chr21:15976819-15976667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               149, 59
               

               Conread position:
               218-368
               

               Cow position:
               chr21:37837880-37838026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               221-355
               

               Cow position:
               chr21:8686960-8687090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               223-369
               

               Cow position:
               chr21:44671925-44671784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               224-372
               

               Cow position:
               chr21:396047-395905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               224-372
               

               Cow position:
               chr21:10001255-10001111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               224-372
               

               Cow position:
               chr21:27081224-27081082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               227-372
               

               Cow position:
               chr21:27341418-27341554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               227-373
               

               Cow position:
               chr21:45473581-45473724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               140, 46
               

               Conread position:
               227-375
               

               Cow position:
               chr21:25383203-25383056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               96, 51
               

               Conread position:
               228-368
               

               Cow position:
               chr21:38440435-38440299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               235-363
               

               Cow position:
               chr21:35647659-35647783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 0
               
Show alignments to all cow chromosomes.
Conread position:	80-356
Cow position:	chr21:26034153-26033879 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	182
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	96, 23
Conread position:	85-372
Cow position:	chr21:8426757-8426482 (view UCSC Genome Browser custom track)
Alignm length:	293
Alignm identity:	197
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	90, 28
Conread position:	105-372
Cow position:	chr21:957970-957709 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	191
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	5, 121
Conread position:	107-328
Cow position:	chr21:27744326-27744105 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	166
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	66, 10
Conread position:	107-347
Cow position:	chr21:13985889-13985647 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	163
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	14, 171
Conread position:	107-373
Cow position:	chr21:742573-742323 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	188
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	37, 23
Conread position:	108-349
Cow position:	chr21:40059314-40059087 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	171
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	29, 47
Conread position:	111-371
Cow position:	chr21:14464877-14464618 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	192
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	68, 22
Conread position:	112-351
Cow position:	chr21:13090669-13090431 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	173
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	67, 34
Conread position:	112-362
Cow position:	chr21:10070631-10070887 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	178
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	67, 33
Conread position:	113-377
Cow position:	chr21:41974074-41974344 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	191
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	35, 171
Conread position:	114-372
Cow position:	chr21:4281593-4281838 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	194
Alignm E-value:	4.00001e-40
Alignm gaps (pig, cow):	22, 13
Conread position:	116-331
Cow position:	chr21:24757225-24757018 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	158
Alignm E-value:	8e-26
Alignm gaps (pig, cow):	63, 24
Conread position:	116-368
Cow position:	chr21:13960976-13960728 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	163
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	61, 129
Conread position:	116-372
Cow position:	chr21:43693106-43692852 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	184
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	16, 30
Conread position:	117-342
Cow position:	chr21:21769369-21769150 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	155
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	38, 28
Conread position:	117-355
Cow position:	chr21:3178133-3177894 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	185
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	59, 69
Conread position:	117-372
Cow position:	chr21:12310760-12310513 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	181
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	57, 18
Conread position:	118-269
Cow position:	chr21:42227409-42227564 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	123
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	22, 81
Conread position:	118-332
Cow position:	chr21:18450041-18449829 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	158
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	57, 27