Cow genome map

Conread name: rnmm21c_n23.y1

Conread position: 78-352
Cow position: chr28:10767650-10767368 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 29

Conread position: 86-368
Cow position: chr28:13356106-13356386 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 93, 194

Conread position: 94-308
Cow position: chr28:17737895-17738112 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 5

Conread position: 101-343
Cow position: chr28:117510-117757 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 30, 9

Conread position: 103-372
Cow position: chr28:16085549-16085303 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 18

Conread position: 107-310
Cow position: chr28:3310980-3311185 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 170

Conread position: 108-371
Cow position: chr28:9100162-9099915 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 19

Conread position: 108-372
Cow position: chr28:19221901-19222174 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 59, 11

Conread position: 109-361
Cow position: chr28:7131855-7132099 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 39

Conread position: 112-373
Cow position: chr28:4307658-4307924 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 169

Conread position: 113-374
Cow position: chr28:4937008-4937267 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 10

Conread position: 114-344
Cow position: chr28:4022903-4022678 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 115-345
Cow position: chr28:28602985-28602757 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 160

Conread position: 117-355
Cow position: chr28:17748174-17748406 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 12

Conread position: 117-360
Cow position: chr28:1532235-1531996 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 83

Conread position: 117-365
Cow position: chr28:10615720-10615962 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 114

Conread position: 119-319
Cow position: chr28:24698917-24698720 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 8

Conread position: 119-343
Cow position: chr28:13174328-13174558 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 26

Conread position: 119-354
Cow position: chr28:16918950-16919173 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 119-355
Cow position: chr28:19127944-19128175 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 157

Conread position: 119-373
Cow position: chr28:11743602-11743842 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 33

Conread position: 120-256
Cow position: chr28:22339600-22339460 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 107

Conread position: 120-275
Cow position: chr28:5428528-5428684 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 107

Conread position: 121-341
Cow position: chr28:7644972-7644748 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 154

Conread position: 121-359
Cow position: chr28:19038791-19039029 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 107

Conread position: 121-363
Cow position: chr28:14242921-14242678 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 86

Conread position: 121-373
Cow position: chr28:11814856-11815101 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 58, 19

Conread position: 122-353
Cow position: chr28:24064669-24064899 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 24

Conread position: 122-363
Cow position: chr28:3143659-3143889 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 23, 93

Conread position: 122-372
Cow position: chr28:11346267-11346510 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 57, 25

Conread position: 122-374
Cow position: chr28:18847783-18847523 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 25

Conread position: 123-313
Cow position: chr28:6301307-6301117 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 51, 154

Conread position: 123-316
Cow position: chr28:21744937-21744748 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 95

Conread position: 123-327
Cow position: chr28:2892479-2892274 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 155

Conread position: 123-330
Cow position: chr28:22085323-22085523 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 28

Conread position: 123-331
Cow position: chr28:12628961-12628754 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 31

Conread position: 123-333
Cow position: chr28:2825644-2825435 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 39

Conread position: 123-342
Cow position: chr28:20046765-20046560 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 89

Conread position: 123-360
Cow position: chr28:7014678-7014442 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 96

Conread position: 123-361
Cow position: chr28:6563671-6563910 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 156

Conread position: 123-361
Cow position: chr28:15362801-15362567 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 101

Conread position: 123-365
Cow position: chr28:4163357-4163595 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 154

Conread position: 123-368
Cow position: chr28:19015924-19015697 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 31

Conread position: 123-368
Cow position: chr28:26265053-26264808 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 153

Conread position: 123-370
Cow position: chr28:4834621-4834864 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 17

Conread position: 123-372
Cow position: chr28:5630322-5630075 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 148

Conread position: 123-372
Cow position: chr28:5818061-5817816 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 83

Conread position: 123-372
Cow position: chr28:7697756-7698000 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 153

Conread position: 123-373
Cow position: chr28:3449532-3449280 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 96

Conread position: 123-373
Cow position: chr28:11866445-11866689 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 101

Conread position: 124-250
Cow position: chr28:6124037-6124167 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 81

Conread position: 124-328
Cow position: chr28:19395085-19394896 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 49, 90

Conread position: 126-328
Cow position: chr28:5609698-5609896 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 94

Conread position: 126-372
Cow position: chr28:17740048-17739803 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 155

Conread position: 127-360
Cow position: chr28:25700650-25700874 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 83

Conread position: 127-372
Cow position: chr28:7008762-7009001 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 42, 80

Conread position: 127-372
Cow position: chr28:10845322-10845083 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 63

Conread position: 129-336
Cow position: chr28:659068-659282 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 155

Conread position: 129-372
Cow position: chr28:16395529-16395292 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 67

Conread position: 130-250
Cow position: chr28:27941565-27941688 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 130-293
Cow position: chr28:21118896-21118731 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 145

Conread position: 130-331
Cow position: chr28:10196655-10196847 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 15

Conread position: 130-331
Cow position: chr28:23728095-23728281 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 130-334
Cow position: chr28:11827905-11827703 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 148

Conread position: 130-335
Cow position: chr28:8359117-8358913 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 147

Conread position: 130-351
Cow position: chr28:11411323-11411538 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 45, 90

Conread position: 130-355
Cow position: chr28:777892-777669 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 88

Conread position: 130-355
Cow position: chr28:4159178-4158949 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 17

Conread position: 130-355
Cow position: chr28:9705871-9705647 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 15

Conread position: 130-365
Cow position: chr28:6283274-6283504 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 45, 67

Conread position: 130-365
Cow position: chr28:11059706-11059485 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 46, 15

Conread position: 130-365
Cow position: chr28:13504791-13505027 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 15

Conread position: 130-368
Cow position: chr28:8347950-8347712 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 142

Conread position: 130-371
Cow position: chr28:5144297-5144542 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 18, 158

Conread position: 130-371
Cow position: chr28:5255085-5254852 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 17

Conread position: 130-372
Cow position: chr28:4282274-4282512 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 46, 15

Conread position: 130-372
Cow position: chr28:7350864-7350632 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 15

Conread position: 130-372
Cow position: chr28:8304458-8304225 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 90

Conread position: 130-373
Cow position: chr28:21103605-21103850 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 15

Conread position: 132-323
Cow position: chr28:4870582-4870779 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 151

Conread position: 132-344
Cow position: chr28:5552498-5552709 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 94, 44

Conread position: 132-365
Cow position: chr28:4013296-4013068 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 47, 14

Conread position: 133-271
Cow position: chr28:10896452-10896310 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 7

Conread position: 133-305
Cow position: chr28:11309881-11310056 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 32

Conread position: 133-313
Cow position: chr28:11562030-11562210 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 143

Conread position: 133-338
Cow position: chr28:13448328-13448134 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 133-365
Cow position: chr28:8291625-8291413 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 12

Conread position: 133-365
Cow position: chr28:23460356-23460132 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 18

Conread position: 133-371
Cow position: chr28:34843362-34843594 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 16

Conread position: 133-372
Cow position: chr28:21868668-21868435 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 14

Conread position: 133-374
Cow position: chr28:3725994-3726237 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 10, 96

Conread position: 133-377
Cow position: chr28:4016734-4016504 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 14

Conread position: 134-311
Cow position: chr28:3759209-3759028 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 145

Conread position: 134-312
Cow position: chr28:16252194-16252368 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 92

Conread position: 134-327
Cow position: chr28:24887807-24887614 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 142

Conread position: 134-359
Cow position: chr28:5436874-5437095 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 128

Conread position: 134-371
Cow position: chr28:23410122-23410347 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 168, 45

Conread position: 134-371
Cow position: chr28:28765692-28765925 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 11

Conread position: 134-372
Cow position: chr28:4881037-4881263 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 134-372
Cow position: chr28:11422606-11422835 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 89

Conread position: 134-372
Cow position: chr28:22182921-22183169 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 244

Conread position: 134-373
Cow position: chr28:10053121-10053353 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 42, 11

Conread position: 135-265
Cow position: chr28:17620148-17620282 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 135-272
Cow position: chr28:5294791-5294929 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 135-275
Cow position: chr28:18740285-18740422 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 89

Conread position: 135-275
Cow position: chr28:22278414-22278562 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 135-297
Cow position: chr28:16159659-16159819 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 91

Conread position: 135-308
Cow position: chr28:16200529-16200702 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 44, 142

Conread position: 135-314
Cow position: chr28:9677873-9677704 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 11

Conread position: 135-322
Cow position: chr28:2077712-2077527 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 86

Conread position: 135-327
Cow position: chr28:18761797-18761981 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 64

Conread position: 135-329
Cow position: chr28:118825-118629 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 44, 145

Conread position: 135-332
Cow position: chr28:27445364-27445556 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 88

Conread position: 135-336
Cow position: chr28:22307211-22307022 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 135-340
Cow position: chr28:32014996-32014793 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 44, 86

Conread position: 135-341
Cow position: chr28:7132168-7132374 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 141

Conread position: 135-343
Cow position: chr28:25827517-25827725 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 149

Conread position: 135-346
Cow position: chr28:28903348-28903559 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 80

Conread position: 135-352
Cow position: chr28:5674083-5673872 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 81

Conread position: 135-354
Cow position: chr28:1654880-1655105 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 16

Conread position: 135-355
Cow position: chr28:4440510-4440290 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 140

Conread position: 135-355
Cow position: chr28:5805873-5805665 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 61

Conread position: 135-355
Cow position: chr28:8396536-8396329 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 42, 27

Conread position: 135-355
Cow position: chr28:8787749-8787534 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 17

Conread position: 135-355
Cow position: chr28:8827375-8827159 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 142

Conread position: 135-356
Cow position: chr28:6358199-6358421 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 44, 139

Conread position: 135-356
Cow position: chr28:12974095-12973873 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 141

Conread position: 135-361
Cow position: chr28:662311-662094 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 135-361
Cow position: chr28:11828749-11828968 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 10

Conread position: 135-362
Cow position: chr28:10959009-10958779 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 44, 11

Conread position: 135-364
Cow position: chr28:13048074-13048298 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 30

Conread position: 135-369
Cow position: chr28:5200038-5199800 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 146

Conread position: 135-371
Cow position: chr28:4643560-4643792 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 11

Conread position: 135-371
Cow position: chr28:9812494-9812257 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 34, 135

Conread position: 135-372
Cow position: chr28:2524153-2523922 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 41, 137

Conread position: 135-372
Cow position: chr28:9426141-9426374 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 78

Conread position: 135-372
Cow position: chr28:10298050-10297834 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 135-372
Cow position: chr28:10495089-10495320 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 40, 30

Conread position: 135-372
Cow position: chr28:13245775-13245538 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 42, 141

Conread position: 135-372
Cow position: chr28:13370930-13371161 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 12

Conread position: 135-372
Cow position: chr28:15272059-15272296 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 146

Conread position: 135-372
Cow position: chr28:21008461-21008689 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 10

Conread position: 135-372
Cow position: chr28:22133119-22132889 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 42, 75

Conread position: 135-372
Cow position: chr28:23262239-23262475 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 134

Conread position: 135-372
Cow position: chr28:23724258-23724484 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 84

Conread position: 135-372
Cow position: chr28:26943941-26944180 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 109

Conread position: 135-372
Cow position: chr28:27218535-27218300 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 44, 16

Conread position: 135-372
Cow position: chr28:28561109-28560874 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 111

Conread position: 135-372
Cow position: chr28:33322663-33322435 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 157, 40

Conread position: 135-373
Cow position: chr28:1383061-1383309 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 12

Conread position: 135-373
Cow position: chr28:10057376-10057610 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 92

Conread position: 135-373
Cow position: chr28:19055228-19054990 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 42, 143

Conread position: 135-377
Cow position: chr28:21845162-21844929 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 86

Conread position: 136-322
Cow position: chr28:11239103-11239293 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 10

Conread position: 136-339
Cow position: chr28:26820066-26820266 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 145

Conread position: 136-371
Cow position: chr28:5204393-5204174 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 136-371
Cow position: chr28:11398582-11398818 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 7, 145

Conread position: 136-372
Cow position: chr28:3484796-3484559 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 43, 90

Conread position: 136-372
Cow position: chr28:3492579-3492805 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 11

Conread position: 136-372
Cow position: chr28:11307308-11307541 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 133

Conread position: 137-345
Cow position: chr28:5152824-5152605 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 46

Conread position: 137-351
Cow position: chr28:17727903-17728101 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 75

Conread position: 137-355
Cow position: chr28:2801436-2801220 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 102

Conread position: 137-355
Cow position: chr28:26826431-26826217 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 140

Conread position: 137-362
Cow position: chr28:23616614-23616394 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 140

Conread position: 137-364
Cow position: chr28:20174046-20173821 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 8

Conread position: 137-368
Cow position: chr28:14657925-14657678 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 137-371
Cow position: chr28:5273218-5273458 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 144

Conread position: 137-372
Cow position: chr28:3011058-3011291 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 141

Conread position: 137-372
Cow position: chr28:7964469-7964690 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 104

Conread position: 137-372
Cow position: chr28:20759484-20759723 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 150

Conread position: 137-372
Cow position: chr28:30293377-30293610 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 32

Conread position: 137-373
Cow position: chr28:5193532-5193308 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 137-373
Cow position: chr28:5931553-5931333 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 80

Conread position: 137-373
Cow position: chr28:19564026-19564251 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 82

Conread position: 137-373
Cow position: chr28:32179907-32179673 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 9

Conread position: 138-303
Cow position: chr28:21263361-21263202 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 39, 7

Conread position: 138-351
Cow position: chr28:33884609-33884400 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 9

Conread position: 138-371
Cow position: chr28:19361947-19361713 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 138

Conread position: 139-265
Cow position: chr28:16964757-16964887 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 139-293
Cow position: chr28:24767615-24767460 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 138

Conread position: 139-298
Cow position: chr28:26304273-26304114 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 136

Conread position: 139-330
Cow position: chr28:11006933-11006745 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 135

Conread position: 139-365
Cow position: chr28:5232147-5231922 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 28, 107

Conread position: 139-371
Cow position: chr28:10669794-10669556 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 139

Conread position: 139-372
Cow position: chr28:17012098-17012318 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 68

Conread position: 139-373
Cow position: chr28:31223350-31223580 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 37, 100

Conread position: 140-308
Cow position: chr28:8655959-8656125 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 58

Conread position: 140-334
Cow position: chr28:3423983-3423792 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 95

Conread position: 140-362
Cow position: chr28:5236080-5235868 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 85

Conread position: 140-363
Cow position: chr28:10480597-10480821 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 141

Conread position: 140-365
Cow position: chr28:8259839-8259612 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 8, 134

Conread position: 140-365
Cow position: chr28:12951622-12951407 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 86

Conread position: 140-365
Cow position: chr28:23793114-23793327 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 168, 35

Conread position: 140-365
Cow position: chr28:26982530-26982754 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 67

Conread position: 140-372
Cow position: chr28:17680830-17680600 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 140-373
Cow position: chr28:13474505-13474277 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 96

Conread position: 140-373
Cow position: chr28:13527404-13527173 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 142

Conread position: 141-272
Cow position: chr28:8165008-8165143 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 141-324
Cow position: chr28:34830359-34830180 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 136

Conread position: 141-344
Cow position: chr28:3137758-3137548 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 115

Conread position: 141-348
Cow position: chr28:24996413-24996612 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 69

Conread position: 141-364
Cow position: chr28:34230436-34230213 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 135

Conread position: 141-373
Cow position: chr28:5236390-5236628 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 38, 140

Conread position: 141-373
Cow position: chr28:25973747-25973511 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 136

Conread position: 142-322
Cow position: chr28:21766159-21765982 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 132

Conread position: 142-323
Cow position: chr28:10252711-10252891 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 95

Conread position: 142-335
Cow position: chr28:20281952-20281772 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 142-355
Cow position: chr28:9636253-9636463 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 71

Conread position: 142-355
Cow position: chr28:30921853-30922068 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 135

Conread position: 142-371
Cow position: chr28:19262380-19262606 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 138

Conread position: 142-372
Cow position: chr28:2819969-2819752 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 143-372
Cow position: chr28:12933533-12933756 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 69

Conread position: 144-361
Cow position: chr28:15601476-15601265 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 80, 46

Conread position: 145-331
Cow position: chr28:7413864-7413677 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 124

Conread position: 145-341
Cow position: chr28:8716179-8716379 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 31, 137

Conread position: 145-346
Cow position: chr28:19994745-19994943 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 33, 133

Conread position: 145-361
Cow position: chr28:3023715-3023925 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 75

Conread position: 145-372
Cow position: chr28:751429-751205 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 132

Conread position: 145-372
Cow position: chr28:4186104-4185884 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 31, 79

Conread position: 145-372
Cow position: chr28:18770288-18770061 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 136

Conread position: 145-373
Cow position: chr28:11817741-11817990 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 142

Conread position: 145-373
Cow position: chr28:24672469-24672240 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 126

Conread position: 146-314
Cow position: chr28:16856906-16857072 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 90

Conread position: 146-344
Cow position: chr28:20968376-20968575 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 132

Conread position: 146-360
Cow position: chr28:22308844-22308630 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 135

Conread position: 146-372
Cow position: chr28:24082470-24082248 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 79

Conread position: 149-297
Cow position: chr28:15295435-15295288 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 88

Conread position: 149-343
Cow position: chr28:4074174-4073975 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 132

Conread position: 149-360
Cow position: chr28:7512383-7512594 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 128

Conread position: 149-372
Cow position: chr28:3200659-3200435 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 129

Conread position: 149-372
Cow position: chr28:3406215-3406433 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 128

Conread position: 149-372
Cow position: chr28:34430226-34430447 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 88

Conread position: 150-372
Cow position: chr28:7388583-7388789 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 151-345
Cow position: chr28:2821456-2821257 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 151-372
Cow position: chr28:12672266-12672487 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 132

Conread position: 151-372
Cow position: chr28:25400062-25399851 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 23

Conread position: 151-373
Cow position: chr28:24646778-24646570 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 151-374
Cow position: chr28:7267754-7267969 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 73

Conread position: 154-330
Cow position: chr28:13160351-13160527 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 91

Conread position: 154-350
Cow position: chr28:18608173-18608369 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 25, 118

Conread position: 154-362
Cow position: chr28:10907275-10907065 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 88

Conread position: 154-368
Cow position: chr28:17071532-17071318 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 127

Conread position: 154-373
Cow position: chr28:21363932-21363723 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 22, 120

Conread position: 155-316
Cow position: chr28:3729829-3729986 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 155-349
Cow position: chr28:7557539-7557734 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 121

Conread position: 155-371
Cow position: chr28:26743822-26743604 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 24, 129

Conread position: 156-352
Cow position: chr28:5188240-5188432 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 20, 60

Conread position: 156-365
Cow position: chr28:16450342-16450556 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 23, 121

Conread position: 156-365
Cow position: chr28:20397176-20397386 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 73

Conread position: 157-372
Cow position: chr28:18369824-18370027 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 123

Conread position: 158-330
Cow position: chr28:25459937-25459772 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 158-370
Cow position: chr28:3408039-3408238 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 158-372
Cow position: chr28:1538352-1538144 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 85

Conread position: 163-371
Cow position: chr28:11559453-11559653 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 28

Conread position: 173-375
Cow position: chr28:5867893-5867700 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 51

Conread position: 174-372
Cow position: chr28:24707076-24706874 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 110

Conread position: 175-316
Cow position: chr28:19118139-19118002 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 48

Conread position: 175-365
Cow position: chr28:19294966-19295145 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 176-369
Cow position: chr28:2899164-2898969 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 112

Conread position: 176-372
Cow position: chr28:4138501-4138693 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 48, 98

Conread position: 177-273
Cow position: chr28:8141822-8141727 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 179-368
Cow position: chr28:28631900-28631713 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 146, 93

Conread position: 182-345
Cow position: chr28:8167193-8167346 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 201-352
Cow position: chr28:13241421-13241568 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 201-371
Cow position: chr28:8149488-8149653 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 201-371
Cow position: chr28:23047762-23047599 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 204-342
Cow position: chr28:7333726-7333594 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 204-344
Cow position: chr28:2743221-2743086 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 204-347
Cow position: chr28:29041911-29042052 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 71

Conread position: 204-354
Cow position: chr28:7498006-7498152 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 204-365
Cow position: chr28:16110078-16109923 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 204-372
Cow position: chr28:8147723-8147885 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 204-372
Cow position: chr28:27161186-27161348 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 204-373
Cow position: chr28:19025864-19026028 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 204-373
Cow position: chr28:31109860-31110028 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 23, 77

Conread position: 204-374
Cow position: chr28:2752353-2752520 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 163, 68

Conread position: 205-365
Cow position: chr28:20313415-20313261 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 206-373
Cow position: chr28:19079706-19079868 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 207-369
Cow position: chr28:4355684-4355525 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 145, 37

Conread position: 209-365
Cow position: chr28:29434292-29434444 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 210-372
Cow position: chr28:25763156-25762999 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 22

Conread position: 212-368
Cow position: chr28:17601421-17601573 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 212-372
Cow position: chr28:21355364-21355209 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 217-362
Cow position: chr28:10163925-10163787 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 217-371
Cow position: chr28:18354201-18354350 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 18

Conread position: 223-374
Cow position: chr28:23007608-23007754 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 224-365
Cow position: chr28:5166888-5166752 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 224-372
Cow position: chr28:26922247-26922390 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 227-372
Cow position: chr28:4765794-4765652 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 227-373
Cow position: chr28:25677223-25677365 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 52

Conread position: 233-343
Cow position: chr28:16389018-16388912 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 0

Show alignments to all cow chromosomes.