Cow genome map

Conread name: rnmm21c_n23.y1

Conread position: 94-338
Cow position: chrX:17498601-17498355 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 189

Conread position: 102-365
Cow position: chrX:17966592-17966347 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 6, 29

Conread position: 103-282
Cow position: chrX:10480018-10479833 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 38, 27

Conread position: 106-365
Cow position: chrX:756182-755933 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 108-365
Cow position: chrX:24170463-24170723 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 173

Conread position: 109-337
Cow position: chrX:28850971-28850759 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 31

Conread position: 110-266
Cow position: chrX:41194162-41194006 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 17

Conread position: 111-358
Cow position: chrX:37072645-37072400 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 16

Conread position: 112-372
Cow position: chrX:43151892-43152157 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 175

Conread position: 113-368
Cow position: chrX:4403573-4403314 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 66, 20

Conread position: 113-369
Cow position: chrX:4268813-4269063 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 66, 96

Conread position: 114-326
Cow position: chrX:41858630-41858839 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 5

Conread position: 114-372
Cow position: chrX:5872590-5872317 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 14, 184

Conread position: 114-373
Cow position: chrX:296643-296398 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 64, 16

Conread position: 115-297
Cow position: chrX:36961964-36961790 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 59

Conread position: 116-318
Cow position: chrX:26881826-26882027 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 58, 17

Conread position: 116-368
Cow position: chrX:29724005-29723743 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 60, 135

Conread position: 116-371
Cow position: chrX:37956097-37955848 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 14

Conread position: 116-372
Cow position: chrX:26979537-26979790 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 163

Conread position: 116-373
Cow position: chrX:33001151-33000903 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 14

Conread position: 117-365
Cow position: chrX:47657645-47657392 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 22

Conread position: 117-367
Cow position: chrX:3654856-3654612 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 82

Conread position: 117-371
Cow position: chrX:44201791-44202046 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 10

Conread position: 118-330
Cow position: chrX:11517728-11517939 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 28

Conread position: 118-332
Cow position: chrX:11602234-11602444 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 156

Conread position: 118-372
Cow position: chrX:9272208-9272469 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 21

Conread position: 119-339
Cow position: chrX:14925524-14925308 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 57, 157

Conread position: 119-341
Cow position: chrX:4612623-4612852 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 132

Conread position: 119-343
Cow position: chrX:44995749-44995526 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 8

Conread position: 119-351
Cow position: chrX:28068106-28067870 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 11, 161

Conread position: 119-364
Cow position: chrX:20339643-20339884 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 159

Conread position: 119-365
Cow position: chrX:20887398-20887633 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 121, 101

Conread position: 119-365
Cow position: chrX:21672809-21672560 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 57

Conread position: 119-368
Cow position: chrX:14955527-14955765 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 26

Conread position: 119-371
Cow position: chrX:39179996-39180233 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 119-371
Cow position: chrX:44192192-44192446 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 60, 11

Conread position: 119-371
Cow position: chrX:44962008-44961751 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 165

Conread position: 119-372
Cow position: chrX:35885481-35885728 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 101

Conread position: 119-372
Cow position: chrX:42246926-42247183 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 166

Conread position: 119-377
Cow position: chrX:18486053-18485791 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 26

Conread position: 120-363
Cow position: chrX:29680014-29680253 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 109, 33

Conread position: 123-243
Cow position: chrX:27226729-27226605 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 123-327
Cow position: chrX:14135922-14135723 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 113

Conread position: 123-328
Cow position: chrX:8759871-8759668 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 157

Conread position: 123-341
Cow position: chrX:32019886-32020104 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 54, 153

Conread position: 123-363
Cow position: chrX:41878690-41878922 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 69

Conread position: 123-365
Cow position: chrX:27705834-27705593 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 67

Conread position: 123-369
Cow position: chrX:35659041-35658802 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 154

Conread position: 123-372
Cow position: chrX:47345580-47345326 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 119

Conread position: 125-371
Cow position: chrX:11614918-11614699 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 127-334
Cow position: chrX:42760494-42760289 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 52, 13

Conread position: 127-352
Cow position: chrX:32877137-32877356 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 19

Conread position: 127-366
Cow position: chrX:16323773-16324009 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 19

Conread position: 127-371
Cow position: chrX:25035138-25035381 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 20

Conread position: 129-246
Cow position: chrX:23883019-23882899 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 69

Conread position: 129-373
Cow position: chrX:11656320-11656078 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 18, 91

Conread position: 130-246
Cow position: chrX:44873106-44873227 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 130-266
Cow position: chrX:783686-783545 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 130-303
Cow position: chrX:30789290-30789463 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 15

Conread position: 130-309
Cow position: chrX:16801028-16801201 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 15

Conread position: 130-311
Cow position: chrX:41215564-41215382 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 10, 146

Conread position: 130-316
Cow position: chrX:15100219-15100038 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 89

Conread position: 130-323
Cow position: chrX:47100355-47100549 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 15

Conread position: 130-327
Cow position: chrX:11674351-11674154 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 15

Conread position: 130-327
Cow position: chrX:40055987-40056171 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 130-327
Cow position: chrX:44225490-44225687 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 24

Conread position: 130-328
Cow position: chrX:27442298-27442496 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 146

Conread position: 130-331
Cow position: chrX:14951113-14951313 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 107

Conread position: 130-331
Cow position: chrX:16412042-16412242 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 15

Conread position: 130-331
Cow position: chrX:19203106-19203306 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 15

Conread position: 130-335
Cow position: chrX:29451305-29451514 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 152

Conread position: 130-336
Cow position: chrX:10279113-10278899 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 16

Conread position: 130-338
Cow position: chrX:597238-597441 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 147

Conread position: 130-341
Cow position: chrX:25930879-25930667 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 49, 23

Conread position: 130-341
Cow position: chrX:37749755-37749953 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 15

Conread position: 130-343
Cow position: chrX:46910048-46909843 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 87

Conread position: 130-345
Cow position: chrX:23358879-23359085 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 17

Conread position: 130-353
Cow position: chrX:2936193-2935975 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 89

Conread position: 130-355
Cow position: chrX:5118259-5118486 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 9

Conread position: 130-365
Cow position: chrX:27261430-27261197 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 90

Conread position: 130-365
Cow position: chrX:42449773-42450008 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 147

Conread position: 130-368
Cow position: chrX:6541498-6541733 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 15

Conread position: 130-371
Cow position: chrX:5919725-5919493 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 130-371
Cow position: chrX:11633923-11633683 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 15, 96

Conread position: 130-371
Cow position: chrX:12290958-12290718 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 91

Conread position: 130-371
Cow position: chrX:34412086-34411847 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 17

Conread position: 130-372
Cow position: chrX:4632615-4632860 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 130-372
Cow position: chrX:12095532-12095774 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 15

Conread position: 130-372
Cow position: chrX:23513769-23514015 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 34

Conread position: 130-372
Cow position: chrX:23563550-23563792 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 146

Conread position: 130-372
Cow position: chrX:24365582-24365823 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 138

Conread position: 130-372
Cow position: chrX:26205219-26205448 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 15

Conread position: 130-372
Cow position: chrX:26493247-26493004 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 147

Conread position: 130-372
Cow position: chrX:27145841-27145603 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 96

Conread position: 130-372
Cow position: chrX:30672145-30672396 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 48, 16

Conread position: 130-372
Cow position: chrX:34441213-34441448 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 49, 150

Conread position: 130-372
Cow position: chrX:39290593-39290359 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 17

Conread position: 130-372
Cow position: chrX:42894160-42893923 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 49, 17

Conread position: 130-372
Cow position: chrX:42927590-42927825 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 73

Conread position: 130-372
Cow position: chrX:44339081-44339322 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 39, 149

Conread position: 130-373
Cow position: chrX:31729677-31729441 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 89

Conread position: 130-377
Cow position: chrX:46588061-46587817 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 71

Conread position: 132-308
Cow position: chrX:6640662-6640490 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 96

Conread position: 133-270
Cow position: chrX:24014154-24014024 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 68

Conread position: 133-279
Cow position: chrX:26367465-26367615 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 133-295
Cow position: chrX:15139262-15139422 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 11

Conread position: 133-333
Cow position: chrX:44123487-44123293 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 66

Conread position: 133-342
Cow position: chrX:11781483-11781282 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 42, 20

Conread position: 133-342
Cow position: chrX:34270800-34270592 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 10, 74

Conread position: 133-344
Cow position: chrX:1960188-1960398 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 32, 80

Conread position: 133-352
Cow position: chrX:40574706-40574923 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 92

Conread position: 133-355
Cow position: chrX:20957472-20957254 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 14

Conread position: 133-365
Cow position: chrX:7351536-7351306 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 14

Conread position: 133-365
Cow position: chrX:38302051-38301815 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 46, 149

Conread position: 133-368
Cow position: chrX:34565523-34565289 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 112

Conread position: 133-371
Cow position: chrX:15146964-15147193 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 7

Conread position: 133-372
Cow position: chrX:36393107-36393340 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 11

Conread position: 134-275
Cow position: chrX:9367549-9367408 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 15

Conread position: 134-304
Cow position: chrX:45044690-45044519 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 144

Conread position: 134-334
Cow position: chrX:16555989-16556180 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 42, 13

Conread position: 134-334
Cow position: chrX:37867490-37867290 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 143

Conread position: 134-365
Cow position: chrX:25815663-25815895 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 122

Conread position: 134-372
Cow position: chrX:32330407-32330168 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 189

Conread position: 134-372
Cow position: chrX:43320818-43321054 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 140

Conread position: 134-373
Cow position: chrX:27446918-27446684 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 11

Conread position: 134-373
Cow position: chrX:40035206-40035442 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 22

Conread position: 135-250
Cow position: chrX:38080383-38080264 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 135-266
Cow position: chrX:10154813-10154950 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 135-275
Cow position: chrX:1996216-1996360 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 135-275
Cow position: chrX:11670922-11670778 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 135-275
Cow position: chrX:35509445-35509587 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 40, 84

Conread position: 135-275
Cow position: chrX:45010302-45010162 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 135-298
Cow position: chrX:13458904-13459057 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 135-303
Cow position: chrX:42506712-42506882 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 10

Conread position: 135-308
Cow position: chrX:11589132-11589304 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 72

Conread position: 135-310
Cow position: chrX:3494815-3494984 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 90

Conread position: 135-314
Cow position: chrX:17525643-17525810 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 10

Conread position: 135-315
Cow position: chrX:4169793-4169975 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 100

Conread position: 135-319
Cow position: chrX:41199457-41199276 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 89

Conread position: 135-321
Cow position: chrX:37867668-37867482 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 142

Conread position: 135-323
Cow position: chrX:42461392-42461570 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 81

Conread position: 135-325
Cow position: chrX:19000362-19000172 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 142

Conread position: 135-328
Cow position: chrX:5097560-5097756 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 11

Conread position: 135-331
Cow position: chrX:35409987-35409792 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 137

Conread position: 135-333
Cow position: chrX:32215464-32215262 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 142

Conread position: 135-333
Cow position: chrX:37751876-37752068 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 71

Conread position: 135-333
Cow position: chrX:41435307-41435511 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 34, 148

Conread position: 135-334
Cow position: chrX:42875442-42875250 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 12

Conread position: 135-337
Cow position: chrX:5876337-5876141 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 22

Conread position: 135-338
Cow position: chrX:33020673-33020470 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 145

Conread position: 135-338
Cow position: chrX:36424042-36424245 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 141

Conread position: 135-338
Cow position: chrX:46533069-46533272 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 144

Conread position: 135-340
Cow position: chrX:18439232-18439027 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 140

Conread position: 135-342
Cow position: chrX:2314383-2314590 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 44, 142

Conread position: 135-344
Cow position: chrX:11454409-11454213 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 66

Conread position: 135-347
Cow position: chrX:51668-51872 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 10

Conread position: 135-352
Cow position: chrX:24332012-24331795 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 42, 142

Conread position: 135-353
Cow position: chrX:9201778-9201566 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 83

Conread position: 135-353
Cow position: chrX:15546116-15545900 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 43, 89

Conread position: 135-355
Cow position: chrX:11844001-11844225 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 34, 141

Conread position: 135-355
Cow position: chrX:17231972-17231751 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 138

Conread position: 135-355
Cow position: chrX:17704619-17704405 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 135-355
Cow position: chrX:17949257-17949480 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 42, 141

Conread position: 135-355
Cow position: chrX:21642246-21642466 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 141

Conread position: 135-355
Cow position: chrX:22813300-22813076 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 142

Conread position: 135-355
Cow position: chrX:22921556-22921337 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 134

Conread position: 135-355
Cow position: chrX:24105079-24104855 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 145

Conread position: 135-356
Cow position: chrX:32747955-32747743 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 18

Conread position: 135-360
Cow position: chrX:19356699-19356480 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 147

Conread position: 135-364
Cow position: chrX:19717746-19717529 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 41, 78

Conread position: 135-365
Cow position: chrX:1719338-1719121 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 135-365
Cow position: chrX:7179118-7178903 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 135-365
Cow position: chrX:36367699-36367935 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 142

Conread position: 135-365
Cow position: chrX:44055038-44054808 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 44, 141

Conread position: 135-368
Cow position: chrX:17524149-17524381 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 10

Conread position: 135-368
Cow position: chrX:21328149-21327914 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 148

Conread position: 135-368
Cow position: chrX:25037227-25036990 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 151

Conread position: 135-368
Cow position: chrX:30133089-30133315 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 73, 0

Conread position: 135-369
Cow position: chrX:18204231-18204465 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 80

Conread position: 135-369
Cow position: chrX:30962640-30962876 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 146

Conread position: 135-370
Cow position: chrX:19018594-19018830 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 44, 10

Conread position: 135-371
Cow position: chrX:7648178-7648409 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 40, 10

Conread position: 135-371
Cow position: chrX:18111614-18111378 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 141

Conread position: 135-371
Cow position: chrX:43008845-43008609 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 141

Conread position: 135-372
Cow position: chrX:1553205-1552968 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 143

Conread position: 135-372
Cow position: chrX:6407779-6407545 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 142

Conread position: 135-372
Cow position: chrX:7278141-7277911 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 135-372
Cow position: chrX:11825408-11825644 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 140

Conread position: 135-372
Cow position: chrX:13147219-13146980 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 24, 149

Conread position: 135-372
Cow position: chrX:27431689-27431919 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 80

Conread position: 135-372
Cow position: chrX:31442604-31442829 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 77

Conread position: 135-372
Cow position: chrX:31948699-31948936 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 140

Conread position: 135-372
Cow position: chrX:36109379-36109617 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 142

Conread position: 135-372
Cow position: chrX:38587611-38587843 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 41, 10

Conread position: 135-372
Cow position: chrX:38935514-38935280 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 125

Conread position: 135-372
Cow position: chrX:38964331-38964108 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 10

Conread position: 135-372
Cow position: chrX:40320641-40320405 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 17

Conread position: 135-372
Cow position: chrX:42480062-42479833 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 83

Conread position: 135-372
Cow position: chrX:43115385-43115151 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 19, 91

Conread position: 135-372
Cow position: chrX:44834419-44834653 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 137

Conread position: 135-372
Cow position: chrX:45139696-45139933 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 141

Conread position: 135-372
Cow position: chrX:46546638-46546875 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 131

Conread position: 135-372
Cow position: chrX:46793515-46793747 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 93

Conread position: 135-372
Cow position: chrX:48071397-48071160 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 141

Conread position: 135-372
Cow position: chrX:48474140-48473906 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 41

Conread position: 135-373
Cow position: chrX:4296589-4296828 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 141

Conread position: 135-373
Cow position: chrX:6267905-6267666 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 122

Conread position: 135-373
Cow position: chrX:10305136-10305349 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 135-373
Cow position: chrX:12979600-12979836 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 83

Conread position: 135-373
Cow position: chrX:26881327-26881566 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 142

Conread position: 135-373
Cow position: chrX:27175235-27175001 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 143

Conread position: 135-373
Cow position: chrX:34315761-34315518 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 16

Conread position: 135-373
Cow position: chrX:35590523-35590758 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 118

Conread position: 135-373
Cow position: chrX:38968129-38967886 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 10

Conread position: 135-373
Cow position: chrX:40283345-40283124 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 32

Conread position: 135-373
Cow position: chrX:42492285-42492525 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 6, 119

Conread position: 135-373
Cow position: chrX:45124635-45124400 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 143

Conread position: 135-374
Cow position: chrX:25049046-25049285 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 144

Conread position: 135-374
Cow position: chrX:27380595-27380352 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 146

Conread position: 135-377
Cow position: chrX:43150666-43150420 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 113

Conread position: 136-306
Cow position: chrX:12197304-12197133 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 145

Conread position: 136-316
Cow position: chrX:42087058-42086883 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 11

Conread position: 136-323
Cow position: chrX:41166596-41166777 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 15

Conread position: 136-339
Cow position: chrX:8327139-8326936 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 139

Conread position: 136-343
Cow position: chrX:34398550-34398756 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 9

Conread position: 136-343
Cow position: chrX:41790193-41790401 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 72

Conread position: 136-352
Cow position: chrX:28940478-28940261 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 43, 87

Conread position: 136-354
Cow position: chrX:20345685-20345470 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 146

Conread position: 136-357
Cow position: chrX:33854993-33855205 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 9

Conread position: 136-361
Cow position: chrX:32942848-32943066 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 136-363
Cow position: chrX:4559968-4559747 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 139

Conread position: 136-365
Cow position: chrX:15006925-15007143 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 43

Conread position: 136-369
Cow position: chrX:13177250-13177477 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 69

Conread position: 136-372
Cow position: chrX:6278262-6278498 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 39

Conread position: 136-372
Cow position: chrX:25412153-25411907 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 40, 132

Conread position: 136-372
Cow position: chrX:34792091-34792311 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 11

Conread position: 136-372
Cow position: chrX:35269090-35268866 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 68

Conread position: 136-372
Cow position: chrX:35276220-35275986 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 141

Conread position: 136-372
Cow position: chrX:36976182-36975952 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 33

Conread position: 136-373
Cow position: chrX:33654609-33654846 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 146

Conread position: 137-274
Cow position: chrX:42314656-42314799 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 137-275
Cow position: chrX:31279696-31279832 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 10

Conread position: 137-300
Cow position: chrX:4486791-4486953 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 91

Conread position: 137-315
Cow position: chrX:27170967-27170795 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 137-347
Cow position: chrX:4109416-4109208 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 10

Conread position: 137-351
Cow position: chrX:24425769-24425982 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 8

Conread position: 137-351
Cow position: chrX:41454720-41454934 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 140

Conread position: 137-355
Cow position: chrX:17293189-17292971 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 40, 143

Conread position: 137-359
Cow position: chrX:38094293-38094504 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 86

Conread position: 137-359
Cow position: chrX:40826517-40826739 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 139

Conread position: 137-360
Cow position: chrX:35392072-35392283 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 77

Conread position: 137-362
Cow position: chrX:30564-30339 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 140

Conread position: 137-362
Cow position: chrX:9634959-9635181 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 136

Conread position: 137-365
Cow position: chrX:1122314-1122537 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 32

Conread position: 137-368
Cow position: chrX:24335843-24336074 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 143

Conread position: 137-368
Cow position: chrX:35431008-35431242 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 116

Conread position: 137-368
Cow position: chrX:44040410-44040184 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 131

Conread position: 137-372
Cow position: chrX:13122177-13121937 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 145

Conread position: 137-372
Cow position: chrX:17956921-17956693 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 9

Conread position: 137-372
Cow position: chrX:42331505-42331278 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 39, 16

Conread position: 137-372
Cow position: chrX:42855696-42855457 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 142

Conread position: 138-299
Cow position: chrX:30041869-30042019 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 138-308
Cow position: chrX:21288382-21288545 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 138-325
Cow position: chrX:26720458-26720638 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 82

Conread position: 138-333
Cow position: chrX:6480363-6480558 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 137

Conread position: 138-341
Cow position: chrX:30958959-30958756 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 39, 8

Conread position: 138-341
Cow position: chrX:40649135-40648926 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 147

Conread position: 138-371
Cow position: chrX:27511646-27511429 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 138-372
Cow position: chrX:38218946-38218714 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 10, 88

Conread position: 139-249
Cow position: chrX:32590174-32590288 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 139-250
Cow position: chrX:19161899-19162014 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 139-316
Cow position: chrX:1101781-1101612 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 86

Conread position: 139-323
Cow position: chrX:4602707-4602890 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 140

Conread position: 139-341
Cow position: chrX:27416326-27416122 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 143

Conread position: 139-355
Cow position: chrX:9251932-9252147 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 86

Conread position: 139-355
Cow position: chrX:20583891-20583682 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 94

Conread position: 139-356
Cow position: chrX:31480195-31479986 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 11

Conread position: 139-359
Cow position: chrX:22115083-22115305 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 138

Conread position: 139-361
Cow position: chrX:27668731-27668948 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 50

Conread position: 139-361
Cow position: chrX:41941854-41941633 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 66

Conread position: 139-361
Cow position: chrX:42380883-42381102 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 14

Conread position: 139-363
Cow position: chrX:35285405-35285181 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 142

Conread position: 139-368
Cow position: chrX:4327951-4328180 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 28, 110

Conread position: 139-368
Cow position: chrX:10251971-10252195 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 88

Conread position: 139-368
Cow position: chrX:21663526-21663297 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 137

Conread position: 139-371
Cow position: chrX:31250621-31250389 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 40, 139

Conread position: 139-372
Cow position: chrX:16541425-16541657 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 138

Conread position: 139-372
Cow position: chrX:23335746-23335972 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 8

Conread position: 139-372
Cow position: chrX:29601597-29601828 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 9, 89

Conread position: 139-372
Cow position: chrX:41027391-41027158 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 138

Conread position: 139-373
Cow position: chrX:36391957-36392191 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 85

Conread position: 139-377
Cow position: chrX:16762999-16762766 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 85

Conread position: 140-315
Cow position: chrX:5915421-5915244 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 139

Conread position: 140-323
Cow position: chrX:6634575-6634392 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 137

Conread position: 140-336
Cow position: chrX:27270599-27270410 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 140-365
Cow position: chrX:27393789-27394020 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 36, 6

Conread position: 140-368
Cow position: chrX:29544657-29544874 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 140-371
Cow position: chrX:1466393-1466163 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 81

Conread position: 140-371
Cow position: chrX:22075025-22074795 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 33, 48

Conread position: 140-371
Cow position: chrX:45968367-45968148 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 140-372
Cow position: chrX:8493296-8493065 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 25

Conread position: 140-372
Cow position: chrX:41238132-41238355 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 39, 73

Conread position: 140-372
Cow position: chrX:42432284-42432515 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 36, 77

Conread position: 140-372
Cow position: chrX:44660365-44660590 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 113, 28

Conread position: 140-373
Cow position: chrX:36866403-36866171 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 140-373
Cow position: chrX:40337141-40336908 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 137

Conread position: 140-373
Cow position: chrX:46032499-46032728 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 12

Conread position: 140-374
Cow position: chrX:36356334-36356110 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 81

Conread position: 141-250
Cow position: chrX:23185108-23185221 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 141-305
Cow position: chrX:34193851-34194015 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 112

Conread position: 141-312
Cow position: chrX:9451570-9451404 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 57

Conread position: 141-316
Cow position: chrX:20977284-20977454 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 110, 38

Conread position: 141-321
Cow position: chrX:1938242-1938065 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 85

Conread position: 141-323
Cow position: chrX:10415023-10415205 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 127

Conread position: 141-328
Cow position: chrX:33466851-33466661 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 94

Conread position: 141-341
Cow position: chrX:4092151-4091954 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 136

Conread position: 141-347
Cow position: chrX:16763701-16763903 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 82

Conread position: 141-364
Cow position: chrX:38549676-38549452 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 66

Conread position: 141-365
Cow position: chrX:28013211-28013441 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 137

Conread position: 141-371
Cow position: chrX:36283569-36283339 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 38, 113

Conread position: 141-372
Cow position: chrX:4399347-4399126 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 85

Conread position: 141-372
Cow position: chrX:9425533-9425743 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 53, 38

Conread position: 141-372
Cow position: chrX:18964605-18964825 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 34

Conread position: 141-372
Cow position: chrX:21593520-21593287 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 32, 127

Conread position: 141-372
Cow position: chrX:28846664-28846893 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 12

Conread position: 141-373
Cow position: chrX:25207632-25207855 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 81

Conread position: 142-316
Cow position: chrX:31983350-31983530 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 139

Conread position: 142-320
Cow position: chrX:41011118-41010949 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 79

Conread position: 142-356
Cow position: chrX:8642273-8642061 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 37, 138

Conread position: 142-359
Cow position: chrX:8869176-8869390 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 72

Conread position: 142-360
Cow position: chrX:46068536-46068747 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 20

Conread position: 142-361
Cow position: chrX:40531798-40532033 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 110

Conread position: 142-365
Cow position: chrX:11762783-11762995 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 74

Conread position: 142-372
Cow position: chrX:37489957-37489718 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 125

Conread position: 142-377
Cow position: chrX:40680843-40680608 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 135

Conread position: 143-348
Cow position: chrX:35681795-35681589 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 94

Conread position: 143-361
Cow position: chrX:19761976-19761764 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 32, 77

Conread position: 143-369
Cow position: chrX:11653994-11653766 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 90

Conread position: 143-372
Cow position: chrX:4645687-4645913 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 36, 74

Conread position: 143-372
Cow position: chrX:29478949-29478724 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 81

Conread position: 144-372
Cow position: chrX:10516480-10516252 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 134

Conread position: 144-373
Cow position: chrX:46023001-46022774 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 132

Conread position: 145-260
Cow position: chrX:42220476-42220595 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 145-301
Cow position: chrX:33678245-33678403 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 134

Conread position: 145-305
Cow position: chrX:48574129-48574291 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 134

Conread position: 145-308
Cow position: chrX:22552754-22552916 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 131

Conread position: 145-317
Cow position: chrX:28107071-28106901 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 72

Conread position: 145-335
Cow position: chrX:876622-876806 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 53

Conread position: 145-352
Cow position: chrX:34554949-34554742 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 31, 130

Conread position: 145-355
Cow position: chrX:3494596-3494806 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 32, 131

Conread position: 145-365
Cow position: chrX:48558971-48558752 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 45

Conread position: 145-368
Cow position: chrX:13924086-13923867 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 43

Conread position: 145-369
Cow position: chrX:20168780-20168560 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 95

Conread position: 145-377
Cow position: chrX:27508799-27509027 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 111

Conread position: 146-365
Cow position: chrX:39220312-39220085 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 137

Conread position: 146-370
Cow position: chrX:35382818-35383032 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 58

Conread position: 146-371
Cow position: chrX:46532266-46532494 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 27, 135

Conread position: 146-372
Cow position: chrX:20881737-20881939 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 67

Conread position: 146-372
Cow position: chrX:27074827-27075051 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 72

Conread position: 148-372
Cow position: chrX:13868926-13868703 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 31, 129

Conread position: 148-372
Cow position: chrX:31436691-31436474 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 31, 76

Conread position: 148-372
Cow position: chrX:45875612-45875392 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 28, 78

Conread position: 149-275
Cow position: chrX:37717943-37717813 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 149-354
Cow position: chrX:21861225-21861424 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 149-365
Cow position: chrX:28632261-28632479 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 138

Conread position: 149-365
Cow position: chrX:31489742-31489526 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 128

Conread position: 150-275
Cow position: chrX:39886992-39887122 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 150-372
Cow position: chrX:34544006-34543784 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 128

Conread position: 151-271
Cow position: chrX:42159161-42159037 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 151-331
Cow position: chrX:45759888-45759711 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 68

Conread position: 151-372
Cow position: chrX:38642461-38642249 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 166, 52

Conread position: 151-373
Cow position: chrX:14985943-14986152 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 47

Conread position: 151-373
Cow position: chrX:42282796-42282577 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 130

Conread position: 153-362
Cow position: chrX:42836398-42836190 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 75

Conread position: 153-373
Cow position: chrX:32821257-32821028 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 113

Conread position: 154-304
Cow position: chrX:11813290-11813140 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 123

Conread position: 154-322
Cow position: chrX:10237697-10237864 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 85

Conread position: 154-339
Cow position: chrX:31986356-31986542 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 25, 72

Conread position: 154-352
Cow position: chrX:41809959-41810149 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 154-362
Cow position: chrX:28837100-28836903 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 110

Conread position: 154-365
Cow position: chrX:1360298-1360091 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 64

Conread position: 154-371
Cow position: chrX:27228345-27228125 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 125

Conread position: 154-371
Cow position: chrX:30840757-30840540 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 67

Conread position: 154-372
Cow position: chrX:842371-842156 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 36

Conread position: 154-372
Cow position: chrX:8731310-8731093 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 122

Conread position: 154-372
Cow position: chrX:44702849-44703074 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 54

Conread position: 154-377
Cow position: chrX:10831265-10831495 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 25, 122

Conread position: 155-355
Cow position: chrX:30824200-30824003 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 60

Conread position: 155-364
Cow position: chrX:34238938-34238726 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 24, 122

Conread position: 155-368
Cow position: chrX:4278904-4279115 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 81

Conread position: 155-371
Cow position: chrX:45543550-45543322 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 138

Conread position: 155-372
Cow position: chrX:32420426-32420213 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 24, 81

Conread position: 155-377
Cow position: chrX:5679715-5679926 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 122

Conread position: 156-312
Cow position: chrX:4366559-4366399 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 61

Conread position: 156-369
Cow position: chrX:23188580-23188778 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 158-372
Cow position: chrX:12309173-12309386 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 21, 119

Conread position: 159-368
Cow position: chrX:31294358-31294569 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 125

Conread position: 160-364
Cow position: chrX:22822265-22822053 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 125

Conread position: 161-373
Cow position: chrX:7337047-7336839 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 14

Conread position: 162-372
Cow position: chrX:32318506-32318304 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 14, 55

Conread position: 169-368
Cow position: chrX:28877970-28878171 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 6

Conread position: 169-372
Cow position: chrX:19965197-19965397 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 100

Conread position: 172-365
Cow position: chrX:29733388-29733586 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 115

Conread position: 172-372
Cow position: chrX:46770768-46770963 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 90, 75

Conread position: 173-364
Cow position: chrX:31829270-31829454 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 173-365
Cow position: chrX:23113476-23113291 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 173-370
Cow position: chrX:6690068-6690259 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 174-365
Cow position: chrX:34503120-34502926 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 104

Conread position: 174-372
Cow position: chrX:31252600-31252417 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 175-338
Cow position: chrX:25048911-25049067 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 175-368
Cow position: chrX:27302068-27301873 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 157, 89

Conread position: 175-372
Cow position: chrX:169350-169547 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 100

Conread position: 175-372
Cow position: chrX:20677956-20678138 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 176-365
Cow position: chrX:41068910-41068731 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 176-372
Cow position: chrX:11859346-11859537 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 48, 97

Conread position: 176-372
Cow position: chrX:47046323-47046509 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 176-372
Cow position: chrX:47079818-47079627 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 176-373
Cow position: chrX:4515878-4515681 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 38

Conread position: 176-377
Cow position: chrX:34222903-34222711 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 177-343
Cow position: chrX:48118547-48118704 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 37

Conread position: 177-363
Cow position: chrX:25459541-25459726 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 38

Conread position: 177-372
Cow position: chrX:31626790-31626974 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 46

Conread position: 185-372
Cow position: chrX:16575294-16575111 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 186-372
Cow position: chrX:24287753-24287931 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 187-361
Cow position: chrX:5135342-5135513 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 190-355
Cow position: chrX:38226933-38227091 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 194-372
Cow position: chrX:33204796-33204969 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 202-365
Cow position: chrX:6259985-6260141 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 203-372
Cow position: chrX:14599696-14599536 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 204-358
Cow position: chrX:753319-753165 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 64

Conread position: 204-365
Cow position: chrX:16348410-16348558 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 204-365
Cow position: chrX:23562796-23562638 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 10, 70

Conread position: 204-365
Cow position: chrX:37129432-37129275 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 204-365
Cow position: chrX:42235362-42235518 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 204-368
Cow position: chrX:23785809-23785650 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 19

Conread position: 204-369
Cow position: chrX:41270825-41270985 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 158, 31

Conread position: 204-372
Cow position: chrX:11717618-11717783 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 76

Conread position: 204-372
Cow position: chrX:20743768-20743604 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 75

Conread position: 204-372
Cow position: chrX:45883808-45883972 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 71

Conread position: 204-373
Cow position: chrX:9365513-9365677 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 204-377
Cow position: chrX:43730061-43730228 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 205-372
Cow position: chrX:46433652-46433491 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 206-372
Cow position: chrX:23498519-23498678 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 207-358
Cow position: chrX:47342275-47342129 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 207-367
Cow position: chrX:36313846-36314003 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 150, 65

Conread position: 207-371
Cow position: chrX:15820754-15820596 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 207-372
Cow position: chrX:9416524-9416684 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 207-373
Cow position: chrX:33640135-33639977 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 209-365
Cow position: chrX:17888265-17888413 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 209-373
Cow position: chrX:7710380-7710541 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 71

Conread position: 210-372
Cow position: chrX:20697454-20697610 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 211-369
Cow position: chrX:38728890-38728739 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 211-373
Cow position: chrX:23092027-23091868 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 60

Conread position: 211-373
Cow position: chrX:45113776-45113615 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 124, 21

Conread position: 212-367
Cow position: chrX:29553441-29553289 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 65

Conread position: 215-372
Cow position: chrX:29289730-29289578 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 227-372
Cow position: chrX:42873525-42873387 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 228-353
Cow position: chrX:23266554-23266433 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 228-365
Cow position: chrX:22914903-22915034 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 228-371
Cow position: chrX:19943097-19943233 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 228-372
Cow position: chrX:3130711-3130572 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 228-373
Cow position: chrX:36514753-36514896 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 77, 49

Conread position: 229-372
Cow position: chrX:5679434-5679570 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 233-365
Cow position: chrX:16830354-16830230 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.