Cow genome map
Conread name: | rnmm31c_p11.y1 |
Conread position: | 223-572 |
Cow position: | chr1:65923596-65923231 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 253 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 65, 28 |
Conread position: | 230-570 |
Cow position: | chr1:20525585-20525928 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 16 |
Conread position: | 234-576 |
Cow position: | chr1:78923341-78923682 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 238 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 89, 11 |
Conread position: | 236-570 |
Cow position: | chr1:40575331-40575649 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 228 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 236-573 |
Cow position: | chr1:12061097-12060754 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-573 |
Cow position: | chr1:24443244-24442909 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 9 |
Conread position: | 236-573 |
Cow position: | chr1:40749119-40748788 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 230 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 52, 9 |
Conread position: | 236-574 |
Cow position: | chr1:3934143-3933804 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr1:17011620-17011282 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 9 |
Conread position: | 236-574 |
Cow position: | chr1:21088546-21088885 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 9 |
Conread position: | 236-574 |
Cow position: | chr1:28874196-28874520 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr1:29363416-29363748 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 236-574 |
Cow position: | chr1:32566807-32566471 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr1:33552042-33552382 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr1:33897373-33897713 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 9 |
Conread position: | 236-574 |
Cow position: | chr1:39544907-39545240 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 9 |
Conread position: | 236-574 |
Cow position: | chr1:52358143-52357805 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 253 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr1:53199660-53199998 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 9 |
Conread position: | 236-574 |
Cow position: | chr1:55275914-55275577 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr1:56143223-56142891 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 9 |
Conread position: | 236-574 |
Cow position: | chr1:62805056-62804722 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr1:69404121-69404457 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 9 |
Conread position: | 236-574 |
Cow position: | chr1:69767693-69768033 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 9 |
Conread position: | 236-574 |
Cow position: | chr1:80358055-80357721 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 9 |
Conread position: | 236-574 |
Cow position: | chr1:81777549-81777880 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 238 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 156, 13 |
Conread position: | 236-574 |
Cow position: | chr1:82653779-82654114 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 236-574 |
Cow position: | chr1:85792794-85793134 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 9 |
Conread position: | 236-574 |
Cow position: | chr1:86595379-86595040 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 9 |
Conread position: | 236-574 |
Cow position: | chr1:91900139-91900479 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 13 |
Conread position: | 236-574 |
Cow position: | chr1:93855632-93855967 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 9 |
Conread position: | 236-574 |
Cow position: | chr1:99914541-99914882 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr1:102433926-102433587 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-576 |
Cow position: | chr1:65387435-65387771 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 9 |
Conread position: | 238-572 |
Cow position: | chr1:4209323-4209659 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 7 |
Conread position: | 238-574 |
Cow position: | chr1:40056221-40056557 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 7 |
Conread position: | 245-573 |
Cow position: | chr1:79635853-79635536 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 42 |
Conread position: | 245-574 |
Cow position: | chr1:5356250-5356581 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 42 |
Conread position: | 245-574 |
Cow position: | chr1:8826169-8826508 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 46 |
Conread position: | 245-574 |
Cow position: | chr1:17940650-17940317 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 24 |
Conread position: | 245-574 |
Cow position: | chr1:26517764-26517436 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 191 |
Conread position: | 245-574 |
Cow position: | chr1:30519720-30520049 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 157 |
Conread position: | 245-574 |
Cow position: | chr1:33713192-33713524 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 0 |
Conread position: | 245-574 |
Cow position: | chr1:34693807-34694136 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 42 |
Conread position: | 245-574 |
Cow position: | chr1:44972442-44972762 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 64 |
Conread position: | 245-574 |
Cow position: | chr1:55320954-55320619 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 241 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 46, 59 |
Conread position: | 245-574 |
Cow position: | chr1:58177983-58177674 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 243 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 23, 38 |
Conread position: | 245-574 |
Cow position: | chr1:67292751-67293078 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 223 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 140, 159 |
Conread position: | 245-574 |
Cow position: | chr1:68606417-68606095 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 7 |
Conread position: | 246-574 |
Cow position: | chr1:40511887-40511569 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 35 |
Conread position: | 246-574 |
Cow position: | chr1:86611260-86611584 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 219 |
Conread position: | 247-574 |
Cow position: | chr1:5503093-5503421 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 204 |
Conread position: | 247-574 |
Cow position: | chr1:49973060-49972716 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 247-574 |
Cow position: | chr1:91446587-91446900 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 153 |
Conread position: | 248-574 |
Cow position: | chr1:30063492-30063809 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 48 |
Conread position: | 249-571 |
Cow position: | chr1:31359536-31359852 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 251-574 |
Cow position: | chr1:34619882-34620190 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 220 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 46, 211 |
Conread position: | 254-574 |
Cow position: | chr1:82923022-82922701 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 190 |
Conread position: | 257-574 |
Cow position: | chr1:39539816-39539501 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 224 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 29, 53 |
Conread position: | 259-573 |
Cow position: | chr1:62243508-62243201 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 63 |
Conread position: | 259-574 |
Cow position: | chr1:31364961-31364645 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 235 |
Conread position: | 264-574 |
Cow position: | chr1:20830033-20830348 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 13 |
Conread position: | 264-574 |
Cow position: | chr1:82912007-82911701 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 218 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 7, 13 |
Conread position: | 264-576 |
Cow position: | chr1:56164690-56164991 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 210 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 7, 13 |
Conread position: | 271-574 |
Cow position: | chr1:72984633-72984927 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 275-574 |
Cow position: | chr1:42737599-42737886 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 181 |
Conread position: | 275-574 |
Cow position: | chr1:88131927-88132229 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 298-574 |
Cow position: | chr1:99315421-99315679 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 187 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 302-574 |
Cow position: | chr1:74255360-74255069 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 198 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 61, 138 |
Conread position: | 302-574 |
Cow position: | chr1:82477156-82477429 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 195 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 97, 6 |
Conread position: | 305-573 |
Cow position: | chr1:13573758-13574030 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 194 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 84, 39 |
Conread position: | 305-574 |
Cow position: | chr1:81288316-81288588 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 53 |
Conread position: | 309-564 |
Cow position: | chr1:38399209-38399449 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 192 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 87, 103 |
Conread position: | 321-574 |
Cow position: | chr1:3384745-3384504 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 185 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 322-573 |
Cow position: | chr1:15474715-15474471 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 172 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 124, 139 |
Conread position: | 322-576 |
Cow position: | chr1:38417337-38417589 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 190 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 69, 148 |
Conread position: | 329-570 |
Cow position: | chr1:18241011-18240775 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 173 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 63, 137 |
Conread position: | 332-572 |
Cow position: | chr1:66486931-66487169 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 171 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 55, 26 |
Conread position: | 339-574 |
Cow position: | chr1:77922922-77923161 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 177 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 359-576 |
Cow position: | chr1:7141403-7141190 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 167 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 33, 101 |
Conread position: | 363-576 |
Cow position: | chr1:93235939-93236152 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 175 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 6, 98 |
Conread position: | 389-572 |
Cow position: | chr1:80445419-80445602 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 136 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 389-574 |
Cow position: | chr1:26584370-26584553 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 135 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 393-574 |
Cow position: | chr1:87969598-87969771 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 405-574 |
Cow position: | chr1:67002442-67002611 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 122 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 416-574 |
Cow position: | chr1:30074170-30074324 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 129 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 418-574 |
Cow position: | chr1:74285376-74285224 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 430-574 |
Cow position: | chr1:45018327-45018185 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 447-574 |
Cow position: | chr1:64697035-64697162 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 97 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 451-575 |
Cow position: | chr1:91079557-91079438 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 105 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 81, 9 |
Show alignments to all cow chromosomes.