Cow genome map

Conread name: rnmm31c_p11.y1

Conread position: 211-574
Cow position: chr11:30278343-30278705 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 41

Conread position: 223-570
Cow position: chr11:43513869-43513513 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 235-574
Cow position: chr11:26564315-26563985 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 14, 7

Conread position: 236-573
Cow position: chr11:9601538-9601213 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 9

Conread position: 236-573
Cow position: chr11:17546939-17547277 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-573
Cow position: chr11:30123063-30122731 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position: chr11:3493770-3494104 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position: chr11:4026834-4026493 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 9

Conread position: 236-574
Cow position: chr11:10848226-10848567 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position: chr11:11988911-11989248 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position: chr11:12357639-12357296 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 236-574
Cow position: chr11:17106907-17106567 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 9

Conread position: 236-574
Cow position: chr11:19063296-19062957 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 13

Conread position: 236-574
Cow position: chr11:19101719-19101378 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 236-574
Cow position: chr11:20733460-20733123 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 236-574
Cow position: chr11:23880806-23881146 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 236-574
Cow position: chr11:24394089-24394430 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position: chr11:29667830-29667491 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position: chr11:38834659-38834333 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 136, 9

Conread position: 236-574
Cow position: chr11:44156471-44156147 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 236-574
Cow position: chr11:57627277-57626937 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position: chr11:63654557-63654219 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 9

Conread position: 236-574
Cow position: chr11:71330371-71330710 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position: chr11:72310258-72309923 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position: chr11:73134065-73134405 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 9

Conread position: 238-574
Cow position: chr11:9733900-9733562 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 7

Conread position: 238-576
Cow position: chr11:32452605-32452945 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 7

Conread position: 242-574
Cow position: chr11:35504423-35504096 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 32

Conread position: 245-574
Cow position: chr11:26548301-26548640 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 212

Conread position: 245-574
Cow position: chr11:49039601-49039260 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 131

Conread position: 245-576
Cow position: chr11:41169910-41169579 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 212

Conread position: 246-574
Cow position: chr11:29613209-29612880 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 281

Conread position: 248-574
Cow position: chr11:17795689-17795343 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 14

Conread position: 255-574
Cow position: chr11:47759487-47759165 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 61

Conread position: 257-574
Cow position: chr11:9975098-9974789 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 45

Conread position: 260-570
Cow position: chr11:28228967-28228657 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 239

Conread position: 261-573
Cow position: chr11:33977657-33977333 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 283

Conread position: 263-574
Cow position: chr11:50026945-50026623 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 129, 18

Conread position: 264-567
Cow position: chr11:61400275-61399973 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 13

Conread position: 264-573
Cow position: chr11:21899040-21898730 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 42

Conread position: 269-574
Cow position: chr11:85393018-85392719 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 127, 175

Conread position: 287-573
Cow position: chr11:1489325-1489054 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 38

Conread position: 305-574
Cow position: chr11:67845728-67845455 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 5, 0

Conread position: 309-573
Cow position: chr11:2882573-2882310 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 90, 21

Conread position: 329-576
Cow position: chr11:10216273-10216024 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 184

Conread position: 334-574
Cow position: chr11:63275527-63275286 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 38

Conread position: 341-574
Cow position: chr11:6682732-6682968 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 126

Conread position: 341-576
Cow position: chr11:54216379-54216141 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 55, 0

Conread position: 356-574
Cow position: chr11:38216661-38216426 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 389-574
Cow position: chr11:31932375-31932561 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 76

Conread position: 393-574
Cow position: chr11:25865901-25865724 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 400-572
Cow position: chr11:10869604-10869771 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 404-574
Cow position: chr11:23249529-23249355 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 121

Conread position: 426-574
Cow position: chr11:21444432-21444576 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 32

Conread position: 426-576
Cow position: chr11:36763910-36764057 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 429-575
Cow position: chr11:44231428-44231587 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Show alignments to all cow chromosomes.