Cow genome map
| Conread name: | rnmm31c_p11.y1 |
| Conread position: | 236-573 |
| Cow position: | chr14:17000340-17000000 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 236-574 |
| Cow position: | chr14:1659174-1659513 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 9 |
| Conread position: | 236-574 |
| Cow position: | chr14:5529792-5530115 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 155, 9 |
| Conread position: | 236-574 |
| Cow position: | chr14:9046295-9046636 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 9 |
| Conread position: | 236-574 |
| Cow position: | chr14:11153433-11153092 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr14:16272573-16272238 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 9 |
| Conread position: | 236-574 |
| Cow position: | chr14:19327543-19327205 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 9 |
| Conread position: | 236-574 |
| Cow position: | chr14:22030726-22030388 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr14:27978079-27978413 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 236-574 |
| Cow position: | chr14:45207025-45207342 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 95, 9 |
| Conread position: | 236-576 |
| Cow position: | chr14:13863371-13863037 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 238-572 |
| Cow position: | chr14:10147594-10147930 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 7 |
| Conread position: | 238-572 |
| Cow position: | chr14:45671326-45670980 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 7 |
| Conread position: | 238-574 |
| Cow position: | chr14:751287-751624 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 11 |
| Conread position: | 245-570 |
| Cow position: | chr14:50139288-50139618 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 204 |
| Conread position: | 245-573 |
| Cow position: | chr14:45710996-45710672 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 42 |
| Conread position: | 245-574 |
| Cow position: | chr14:16918991-16918660 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 229 |
| Conread position: | 245-574 |
| Cow position: | chr14:17965060-17965381 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 125, 46 |
| Conread position: | 245-574 |
| Cow position: | chr14:29046958-29046616 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 245-574 |
| Cow position: | chr14:40341780-40342118 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 142 |
| Conread position: | 245-574 |
| Cow position: | chr14:43555705-43556031 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 31 |
| Conread position: | 245-574 |
| Cow position: | chr14:44227105-44227434 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 46 |
| Conread position: | 245-574 |
| Cow position: | chr14:44689797-44690129 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 245-576 |
| Cow position: | chr14:30705586-30705246 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 83 |
| Conread position: | 247-574 |
| Cow position: | chr14:44775308-44774983 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 65 |
| Conread position: | 247-576 |
| Cow position: | chr14:39722223-39721910 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 247-576 |
| Cow position: | chr14:45678350-45678022 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 77 |
| Conread position: | 250-574 |
| Cow position: | chr14:18105177-18105485 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 64, 107 |
| Conread position: | 250-574 |
| Cow position: | chr14:38147739-38148056 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 251-574 |
| Cow position: | chr14:33688941-33689262 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 260-574 |
| Cow position: | chr14:5513679-5513988 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 203 |
| Conread position: | 260-574 |
| Cow position: | chr14:13303702-13304010 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 12 |
| Conread position: | 263-572 |
| Cow position: | chr14:23932358-23932646 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 180, 8 |
| Conread position: | 264-572 |
| Cow position: | chr14:12124438-12124127 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 264-574 |
| Cow position: | chr14:17490713-17490400 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 269-572 |
| Cow position: | chr14:32043895-32044192 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 118, 10 |
| Conread position: | 272-570 |
| Cow position: | chr14:32447716-32448016 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 275-574 |
| Cow position: | chr14:20783212-20783525 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 275-574 |
| Cow position: | chr14:40168975-40168678 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 47 |
| Conread position: | 312-574 |
| Cow position: | chr14:15275056-15274781 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 312-576 |
| Cow position: | chr14:2951766-2951513 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 100 |
| Conread position: | 320-574 |
| Cow position: | chr14:23256553-23256306 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 133 |
| Conread position: | 322-572 |
| Cow position: | chr14:38814677-38814431 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 77, 49 |
| Conread position: | 393-574 |
| Cow position: | chr14:28244794-28244618 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 417-572 |
| Cow position: | chr14:31882359-31882514 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-574 |
| Cow position: | chr14:47925999-47926141 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 477-574 |
| Cow position: | chr14:20564654-20564557 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.