Cow genome map


           Conread name:
           rnmm31c_p11.y1
        

               Conread position:
               167-574
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               188, 327
               

               Conread position:
               227-574
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               8, 140
               

               Conread position:
               228-574
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 17
               

               Conread position:
               230-570
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 79
               

               Conread position:
               234-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 11
               

               Conread position:
               235-574
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               236-573
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               109, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               237-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               94, 49
               

               Conread position:
               238-572
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 7
               

               Conread position:
               245-570
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 117
               

               Conread position:
               245-572
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 7
               

               Conread position:
               245-572
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 220
               

               Conread position:
               245-573
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 301
               

               Conread position:
               245-573
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 42
               

               Conread position:
               245-573
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               245-573
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 42
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 235
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               76, 43
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 281
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               27, 192
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               37, 105
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               268, 154
               

               Conread position:
               248-576
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 153
               

               Conread position:
               253-574
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 23
               

               Conread position:
               260-572
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               263-574
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               14, 6
               

               Conread position:
               264-574
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               69, 153
               

               Conread position:
               264-574
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 13
               

               Conread position:
               266-573
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               267-574
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               146, 132
               

               Conread position:
               275-574
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 246
               

               Conread position:
               276-573
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               276-574
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               116, 12
               

               Conread position:
               286-574
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               103, 97
               

               Conread position:
               290-574
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               128, 114
               

               Conread position:
               297-571
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               95, 229
               

               Conread position:
               321-573
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               70, 177
               

               Conread position:
               332-574
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               60, 141
               

               Conread position:
               351-574
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               356-576
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               365-574
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               378-574
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               389-576
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               135, 45
               

               Conread position:
               413-574
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               418-574
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 0
               
Show alignments to all cow chromosomes.