Cow genome map

Conread name: rnmm31c_p11.y1

Conread position: 226-574
Cow position: chr20:15096772-15096432 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 230, 102

Conread position: 236-574
Cow position: chr20:823894-824232 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 236-574
Cow position: chr20:19439038-19439377 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 236-574
Cow position: chr20:21915753-21916098 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position: chr20:27870326-27870669 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position: chr20:29949640-29949990 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 9

Conread position: 236-574
Cow position: chr20:30686695-30687037 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 238-570
Cow position: chr20:30429395-30429728 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 7

Conread position: 245-573
Cow position: chr20:32349398-32349724 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 219

Conread position: 245-574
Cow position: chr20:5229384-5229057 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 87, 76

Conread position: 245-574
Cow position: chr20:9344098-9344421 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 209

Conread position: 245-574
Cow position: chr20:9521003-9520675 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 67

Conread position: 245-574
Cow position: chr20:21395062-21395379 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 42

Conread position: 245-574
Cow position: chr20:27338340-27338662 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 212, 99

Conread position: 248-574
Cow position: chr20:14221419-14221112 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 222
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 106, 46

Conread position: 250-574
Cow position: chr20:12687775-12687459 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 225

Conread position: 256-574
Cow position: chr20:22210191-22210496 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 31

Conread position: 256-576
Cow position: chr20:18323796-18323492 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 147

Conread position: 264-572
Cow position: chr20:38917510-38917812 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 275-574
Cow position: chr20:15293150-15293443 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 197

Conread position: 293-574
Cow position: chr20:13663876-13663586 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 20

Conread position: 314-574
Cow position: chr20:871808-871546 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 214

Conread position: 323-572
Cow position: chr20:27896819-27896583 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 130

Conread position: 324-573
Cow position: chr20:9546878-9547112 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 75

Conread position: 324-574
Cow position: chr20:32120544-32120794 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 108

Conread position: 327-574
Cow position: chr20:19340852-19341093 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 54

Conread position: 348-574
Cow position: chr20:24615658-24615431 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 66

Conread position: 378-572
Cow position: chr20:33182876-33182681 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 82

Conread position: 389-574
Cow position: chr20:12437144-12436960 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 70, 0

Conread position: 413-574
Cow position: chr20:22698298-22698455 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 151, 96

Conread position: 452-574
Cow position: chr20:41364296-41364175 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.