Cow genome map
| Conread name: | rnmm31c_p11.y1 |
| Conread position: | 226-570 |
| Cow position: | chr21:2722305-2722627 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 179, 19 |
| Conread position: | 229-574 |
| Cow position: | chr21:2512075-2512422 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 16 |
| Conread position: | 236-572 |
| Cow position: | chr21:45491286-45491615 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 143, 9 |
| Conread position: | 236-573 |
| Cow position: | chr21:1778837-1779164 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 236-574 |
| Cow position: | chr21:147167-147497 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr21:10851321-10851651 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 9 |
| Conread position: | 236-574 |
| Cow position: | chr21:11506846-11507187 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 9 |
| Conread position: | 236-574 |
| Cow position: | chr21:27284703-27285042 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 9 |
| Conread position: | 236-574 |
| Cow position: | chr21:33253417-33253756 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr21:39426296-39426645 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 163, 9 |
| Conread position: | 236-574 |
| Cow position: | chr21:42914604-42914938 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 112, 9 |
| Conread position: | 236-574 |
| Cow position: | chr21:47646567-47646908 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 9 |
| Conread position: | 238-572 |
| Cow position: | chr21:27036162-27035826 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 7 |
| Conread position: | 238-572 |
| Cow position: | chr21:34822975-34822639 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 7 |
| Conread position: | 238-572 |
| Cow position: | chr21:40683207-40682872 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 7 |
| Conread position: | 245-572 |
| Cow position: | chr21:4564714-4565037 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 247 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 108, 27 |
| Conread position: | 245-574 |
| Cow position: | chr21:1286958-1286640 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 245-574 |
| Cow position: | chr21:31515073-31514741 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 245-574 |
| Cow position: | chr21:47942192-47942522 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 245-576 |
| Cow position: | chr21:36979673-36979335 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 205 |
| Conread position: | 246-574 |
| Cow position: | chr21:35145003-35145325 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 207 |
| Conread position: | 255-576 |
| Cow position: | chr21:29004260-29003962 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 257-574 |
| Cow position: | chr21:27567012-27567319 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 111, 12 |
| Conread position: | 264-574 |
| Cow position: | chr21:12054756-12054444 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 264-574 |
| Cow position: | chr21:26635892-26635584 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 277-574 |
| Cow position: | chr21:5018419-5018713 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 45 |
| Conread position: | 293-574 |
| Cow position: | chr21:6625814-6626106 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 89, 232 |
| Conread position: | 356-574 |
| Cow position: | chr21:25783206-25783431 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 412-573 |
| Cow position: | chr21:28613736-28613900 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 45, 53 |
| Conread position: | 413-574 |
| Cow position: | chr21:2880407-2880248 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 417-573 |
| Cow position: | chr21:2673549-2673396 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 438-576 |
| Cow position: | chr21:31250451-31250587 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 465-574 |
| Cow position: | chr21:30563138-30563247 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.