Cow genome map
| Conread name: | rnmm31c_p11.y1 |
| Conread position: | 226-574 |
| Cow position: | chr28:7741544-7741882 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 26 |
| Conread position: | 230-569 |
| Cow position: | chr28:7827092-7827432 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 15 |
| Conread position: | 235-573 |
| Cow position: | chr28:1505977-1506313 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 10 |
| Conread position: | 236-570 |
| Cow position: | chr28:1954465-1954803 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr28:2085570-2085912 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 9 |
| Conread position: | 236-574 |
| Cow position: | chr28:3191144-3190805 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr28:5567251-5567580 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 9 |
| Conread position: | 236-574 |
| Cow position: | chr28:5938598-5938935 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr28:14704276-14703938 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr28:17666195-17665860 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr28:22260040-22259703 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr28:24589968-24590304 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 236-574 |
| Cow position: | chr28:26425144-26424811 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 236-574 |
| Cow position: | chr28:32791267-32790944 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 238-573 |
| Cow position: | chr28:484483-484147 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 245-573 |
| Cow position: | chr28:18519329-18519001 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 245-574 |
| Cow position: | chr28:1386277-1385958 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 245-574 |
| Cow position: | chr28:4575346-4575021 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 245-574 |
| Cow position: | chr28:13461100-13461427 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 35 |
| Conread position: | 245-574 |
| Cow position: | chr28:17389520-17389849 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 166 |
| Conread position: | 247-574 |
| Cow position: | chr28:28750121-28750422 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 147, 53 |
| Conread position: | 250-574 |
| Cow position: | chr28:9242024-9241704 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 253-574 |
| Cow position: | chr28:12409107-12408778 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 59 |
| Conread position: | 253-574 |
| Cow position: | chr28:14232804-14232473 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 34 |
| Conread position: | 264-573 |
| Cow position: | chr28:22042149-22041839 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 264-574 |
| Cow position: | chr28:9179751-9180064 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 273-574 |
| Cow position: | chr28:15241538-15241230 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 282-574 |
| Cow position: | chr28:12648526-12648227 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 305-574 |
| Cow position: | chr28:33253485-33253756 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 188 |
| Conread position: | 326-574 |
| Cow position: | chr28:5112943-5112677 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 329-570 |
| Cow position: | chr28:1216633-1216388 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 128, 60 |
| Conread position: | 357-574 |
| Cow position: | chr28:2117209-2117426 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 365-570 |
| Cow position: | chr28:10580642-10580430 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 168 |
| Conread position: | 370-576 |
| Cow position: | chr28:13604001-13604211 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 28, 163 |
| Conread position: | 404-572 |
| Cow position: | chr28:1459372-1459540 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 406-574 |
| Cow position: | chr28:34595513-34595679 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 417-572 |
| Cow position: | chr28:6537520-6537365 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 434-574 |
| Cow position: | chr28:12151638-12151777 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 37 |
Show alignments to all cow chromosomes.