Cow genome map


           Conread name:
           rnmm31c_p11.y1
        

               Conread position:
               217-574
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               230-574
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 169
               

               Conread position:
               234-574
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 11
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 9
               

               Conread position:
               236-576
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 13
               

               Conread position:
               236-576
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-576
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               238-570
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 7
               

               Conread position:
               238-570
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 7
               

               Conread position:
               238-572
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 7
               

               Conread position:
               238-572
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 7
               

               Conread position:
               238-572
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               238-572
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 7
               

               Conread position:
               238-574
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 7
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 76
               

               Conread position:
               247-574
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               253-574
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 68
               

               Conread position:
               253-574
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               255-572
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 20
               

               Conread position:
               259-574
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 95
               

               Conread position:
               261-574
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 8
               

               Conread position:
               267-574
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 121
               

               Conread position:
               277-574
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               124, 83
               

               Conread position:
               298-566
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               323-574
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 119
               

               Conread position:
               331-574
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               61, 125
               

               Conread position:
               332-574
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               60, 93
               

               Conread position:
               354-574
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               390-572
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               390-572
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               393-574
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               404-572
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               405-572
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               411-574
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               413-572
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               442-574
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               461-576
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               85, 71
               
Show alignments to all cow chromosomes.