Cow genome map

Conread name: rnmm31c_p11.y1

Conread position: 215-574
Cow position:
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 28

Conread position: 217-574
Cow position:
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 77

Conread position: 218-574
Cow position:
Alignm length: 361
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 102

Conread position: 228-574
Cow position:
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 246

Conread position: 229-574
Cow position:
Alignm length: 350
Alignm identity: 250
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 92

Conread position: 229-574
Cow position:
Alignm length: 352
Alignm identity: 226
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 79

Conread position: 236-573
Cow position:
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 236-574
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 9

Conread position: 236-574
Cow position:
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 9

Conread position: 236-574
Cow position:
Alignm length: 342
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 236-574
Cow position:
Alignm length: 346
Alignm identity: 232
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 9

Conread position: 236-574
Cow position:
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position:
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 236-574
Cow position:
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 236-574
Cow position:
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 236-574
Cow position:
Alignm length: 346
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 9

Conread position: 236-574
Cow position:
Alignm length: 343
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position:
Alignm length: 352
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 201

Conread position: 236-574
Cow position:
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 236-574
Cow position:
Alignm length: 342
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position:
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 9

Conread position: 236-574
Cow position:
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 9

Conread position: 236-574
Cow position:
Alignm length: 342
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-574
Cow position:
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 236-574
Cow position:
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-576
Cow position:
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 236-576
Cow position:
Alignm length: 345
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 163, 8

Conread position: 238-572
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 7

Conread position: 238-572
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 7

Conread position: 238-572
Cow position:
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 7

Conread position: 238-574
Cow position:
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 7

Conread position: 238-574
Cow position:
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 7

Conread position: 241-570
Cow position:
Alignm length: 346
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 6

Conread position: 245-572
Cow position:
Alignm length: 333
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 245-572
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 29

Conread position: 245-572
Cow position:
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 56

Conread position: 245-572
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 93

Conread position: 245-573
Cow position:
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 245-573
Cow position:
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 147, 249

Conread position: 245-574
Cow position:
Alignm length: 348
Alignm identity: 246
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 128, 14

Conread position: 245-574
Cow position:
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 64

Conread position: 245-574
Cow position:
Alignm length: 338
Alignm identity: 231
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 23, 31

Conread position: 245-574
Cow position:
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 19

Conread position: 245-574
Cow position:
Alignm length: 340
Alignm identity: 238
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 137, 85

Conread position: 245-574
Cow position:
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 215

Conread position: 245-575
Cow position:
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 42

Conread position: 245-576
Cow position:
Alignm length: 332
Alignm identity: 221
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 246-572
Cow position:
Alignm length: 329
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 263, 45

Conread position: 246-574
Cow position:
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 230

Conread position: 246-574
Cow position:
Alignm length: 333
Alignm identity: 235
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 44

Conread position: 246-574
Cow position:
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 249-574
Cow position:
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 166

Conread position: 249-574
Cow position:
Alignm length: 330
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 130

Conread position: 253-574
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 16

Conread position: 254-574
Cow position:
Alignm length: 322
Alignm identity: 223
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 163, 48

Conread position: 255-574
Cow position:
Alignm length: 323
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 259-574
Cow position:
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 38

Conread position: 264-570
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 264-573
Cow position:
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 60

Conread position: 264-574
Cow position:
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 13

Conread position: 264-574
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 7, 13

Conread position: 264-574
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 90

Conread position: 264-574
Cow position:
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 13

Conread position: 264-574
Cow position:
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 264-574
Cow position:
Alignm length: 315
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 13

Conread position: 264-574
Cow position:
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 13

Conread position: 264-574
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 7, 13

Conread position: 269-574
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 19

Conread position: 269-574
Cow position:
Alignm length: 313
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 67

Conread position: 274-573
Cow position:
Alignm length: 300
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 275-574
Cow position:
Alignm length: 305
Alignm identity: 199
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 160, 30

Conread position: 275-574
Cow position:
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 277-576
Cow position:
Alignm length: 307
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 251

Conread position: 280-574
Cow position:
Alignm length: 299
Alignm identity: 199
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 105, 25

Conread position: 283-574
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 108, 210

Conread position: 296-574
Cow position:
Alignm length: 286
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 127

Conread position: 306-573
Cow position:
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 134

Conread position: 322-574
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 14

Conread position: 324-574
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 132

Conread position: 344-572
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 389-572
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 405-574
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 406-574
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 420-574
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 52

Show alignments to all cow chromosomes.