Cow genome map


           Conread name:
           rnmm31c_p11.y1
        

               Conread position:
               230-574
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               209, 25
               

               Conread position:
               231-574
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 14
               

               Conread position:
               231-574
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 11
               

               Conread position:
               236-572
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-573
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 9
               

               Conread position:
               236-573
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-576
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 9
               

               Conread position:
               236-576
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 9
               

               Conread position:
               237-574
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               238-569
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 7
               

               Conread position:
               238-570
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 7
               

               Conread position:
               238-570
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 7
               

               Conread position:
               238-574
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               238-574
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 7
               

               Conread position:
               238-574
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 7
               

               Conread position:
               242-574
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               245-571
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               43, 76
               

               Conread position:
               245-572
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               76, 124
               

               Conread position:
               245-572
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 42
               

               Conread position:
               245-573
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 60
               

               Conread position:
               245-573
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 124
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 75
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 36
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 170
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 62
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 46
               

               Conread position:
               245-576
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 69
               

               Conread position:
               246-575
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 42
               

               Conread position:
               247-572
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 25
               

               Conread position:
               251-573
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               81, 23
               

               Conread position:
               253-574
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 67
               

               Conread position:
               255-572
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               127, 48
               

               Conread position:
               255-574
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 208
               

               Conread position:
               263-574
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               264-573
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               7, 13
               

               Conread position:
               264-574
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               7, 13
               

               Conread position:
               264-574
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 13
               

               Conread position:
               264-574
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 264
               

               Conread position:
               267-573
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               269-574
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 18
               

               Conread position:
               275-574
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 87
               

               Conread position:
               291-574
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               106, 240
               

               Conread position:
               298-569
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               97, 115
               

               Conread position:
               307-572
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               315-573
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               324-574
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 142
               

               Conread position:
               358-573
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 61
               

               Conread position:
               362-573
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               389-574
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               151
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               389-574
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               417-574
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               425-570
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               425-574
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.