Cow genome map
Conread name: | rnmm31c_p11.y1 |
Conread position: | 230-574 |
Cow position: | chr5:69622497-69622819 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 238 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 209, 25 |
Conread position: | 231-574 |
Cow position: | chr5:27908380-27908038 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 14 |
Conread position: | 231-574 |
Cow position: | chr5:41527903-41527560 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 11 |
Conread position: | 236-572 |
Cow position: | chr5:34697498-34697832 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-573 |
Cow position: | chr5:57481645-57481308 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 9 |
Conread position: | 236-573 |
Cow position: | chr5:73488665-73488328 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 9 |
Conread position: | 236-574 |
Cow position: | chr5:1341139-1340797 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 9 |
Conread position: | 236-574 |
Cow position: | chr5:2915343-2915675 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr5:3786821-3787161 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr5:4018301-4017965 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 236-574 |
Cow position: | chr5:4070102-4070454 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 9 |
Conread position: | 236-574 |
Cow position: | chr5:4386137-4386470 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 9 |
Conread position: | 236-574 |
Cow position: | chr5:10775375-10775030 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 9 |
Conread position: | 236-574 |
Cow position: | chr5:10842485-10842148 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 238 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 163, 9 |
Conread position: | 236-574 |
Cow position: | chr5:10855922-10855584 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 9 |
Conread position: | 236-574 |
Cow position: | chr5:18121589-18121249 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 9 |
Conread position: | 236-574 |
Cow position: | chr5:24099558-24099894 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 9 |
Conread position: | 236-574 |
Cow position: | chr5:30580232-30580577 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 9 |
Conread position: | 236-574 |
Cow position: | chr5:31707457-31707796 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 9 |
Conread position: | 236-574 |
Cow position: | chr5:32773659-32773998 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr5:37733241-37733582 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 9 |
Conread position: | 236-574 |
Cow position: | chr5:47830181-47829844 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 9 |
Conread position: | 236-574 |
Cow position: | chr5:49519454-49519789 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr5:51308966-51308619 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 9 |
Conread position: | 236-574 |
Cow position: | chr5:54791739-54791399 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr5:55628885-55629227 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 9 |
Conread position: | 236-574 |
Cow position: | chr5:59283210-59283549 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-574 |
Cow position: | chr5:64781122-64780782 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 9 |
Conread position: | 236-576 |
Cow position: | chr5:5104116-5104457 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 9 |
Conread position: | 236-576 |
Cow position: | chr5:12731816-12731479 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 9 |
Conread position: | 237-574 |
Cow position: | chr5:46664912-46665242 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 238-569 |
Cow position: | chr5:26078298-26077964 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 7 |
Conread position: | 238-570 |
Cow position: | chr5:42505900-42506234 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 7 |
Conread position: | 238-570 |
Cow position: | chr5:46808207-46808542 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 7 |
Conread position: | 238-574 |
Cow position: | chr5:988166-987835 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 238-574 |
Cow position: | chr5:35300993-35301331 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 7 |
Conread position: | 238-574 |
Cow position: | chr5:59061532-59061871 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 7 |
Conread position: | 242-574 |
Cow position: | chr5:52424233-52423909 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 221 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 42, 30 |
Conread position: | 245-571 |
Cow position: | chr5:23686990-23686669 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 232 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 43, 76 |
Conread position: | 245-572 |
Cow position: | chr5:41554434-41554104 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 233 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 76, 124 |
Conread position: | 245-572 |
Cow position: | chr5:45701217-45701545 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 42 |
Conread position: | 245-573 |
Cow position: | chr5:29767031-29767355 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 60 |
Conread position: | 245-573 |
Cow position: | chr5:31100521-31100196 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 124 |
Conread position: | 245-574 |
Cow position: | chr5:3503204-3502875 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 75 |
Conread position: | 245-574 |
Cow position: | chr5:18885628-18885303 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 36 |
Conread position: | 245-574 |
Cow position: | chr5:24107782-24107457 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 170 |
Conread position: | 245-574 |
Cow position: | chr5:24151682-24152007 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 62 |
Conread position: | 245-574 |
Cow position: | chr5:60716707-60716384 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 46 |
Conread position: | 245-576 |
Cow position: | chr5:20311451-20311118 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 69 |
Conread position: | 246-575 |
Cow position: | chr5:41960831-41960512 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 42 |
Conread position: | 247-572 |
Cow position: | chr5:14784452-14784138 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 25 |
Conread position: | 251-573 |
Cow position: | chr5:7143139-7142832 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 191 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 81, 23 |
Conread position: | 253-574 |
Cow position: | chr5:18560493-18560173 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 67 |
Conread position: | 255-572 |
Cow position: | chr5:37847469-37847155 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 215 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 127, 48 |
Conread position: | 255-574 |
Cow position: | chr5:12642833-12642516 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 208 |
Conread position: | 263-574 |
Cow position: | chr5:47893625-47893311 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 264-573 |
Cow position: | chr5:4757256-4756951 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 220 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 7, 13 |
Conread position: | 264-574 |
Cow position: | chr5:18664704-18665008 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 221 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 7, 13 |
Conread position: | 264-574 |
Cow position: | chr5:23959408-23959097 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 13 |
Conread position: | 264-574 |
Cow position: | chr5:46777314-46777626 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 264 |
Conread position: | 267-573 |
Cow position: | chr5:50409753-50409452 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 202 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 29, 7 |
Conread position: | 269-574 |
Cow position: | chr5:40923713-40923413 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 18 |
Conread position: | 275-574 |
Cow position: | chr5:7274776-7275073 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 87 |
Conread position: | 291-574 |
Cow position: | chr5:62413922-62414210 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 195 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 106, 240 |
Conread position: | 298-569 |
Cow position: | chr5:62361634-62361901 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 192 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 97, 115 |
Conread position: | 307-572 |
Cow position: | chr5:10813787-10813519 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 315-573 |
Cow position: | chr5:32281793-32281536 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 199 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 27, 14 |
Conread position: | 324-574 |
Cow position: | chr5:32951882-32952131 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 185 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 68, 142 |
Conread position: | 358-573 |
Cow position: | chr5:65721723-65721520 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 33, 61 |
Conread position: | 362-573 |
Cow position: | chr5:52434757-52434973 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 168 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 389-574 |
Cow position: | chr5:11115702-11115520 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 151 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 389-574 |
Cow position: | chr5:53624773-53624594 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 108 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 417-574 |
Cow position: | chr5:34189992-34190149 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 425-570 |
Cow position: | chr5:6587500-6587355 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 105 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 425-574 |
Cow position: | chr5:13046741-13046890 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 117 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.