Cow genome map
| Conread name: | rnmm31c_p11.y1 |
| Conread position: | 218-574 |
| Cow position: | chr7:48635538-48635882 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 223-570 |
| Cow position: | chr7:21126550-21126210 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 236-567 |
| Cow position: | chr7:14214241-14213913 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:1452771-1453107 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:5663686-5664029 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:10430298-10429966 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:13532777-13532452 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:14138470-14138133 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:20774209-20773872 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:20798317-20797985 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 163, 13 |
| Conread position: | 236-574 |
| Cow position: | chr7:21986551-21986865 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 236-574 |
| Cow position: | chr7:24807349-24807021 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:25440628-25440965 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:27101165-27100828 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:34487039-34487374 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:52763406-52763747 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:55536801-55536466 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:63386859-63387209 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:64239879-64239531 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 236-574 |
| Cow position: | chr7:66905847-66906188 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 238-572 |
| Cow position: | chr7:66036301-66036631 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 7 |
| Conread position: | 238-574 |
| Cow position: | chr7:6721273-6721602 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 238-574 |
| Cow position: | chr7:20514649-20514325 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 154, 7 |
| Conread position: | 238-574 |
| Cow position: | chr7:53407733-53408048 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 245-570 |
| Cow position: | chr7:1371511-1371188 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 272 |
| Conread position: | 245-570 |
| Cow position: | chr7:38397948-38398276 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 245-571 |
| Cow position: | chr7:3548550-3548239 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 153, 58 |
| Conread position: | 245-572 |
| Cow position: | chr7:1403327-1403029 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 245-572 |
| Cow position: | chr7:68334076-68334380 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 245-574 |
| Cow position: | chr7:1609503-1609175 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 84 |
| Conread position: | 245-574 |
| Cow position: | chr7:21311585-21311912 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 57 |
| Conread position: | 245-574 |
| Cow position: | chr7:24878747-24878421 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 245-574 |
| Cow position: | chr7:33332692-33333022 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 285 |
| Conread position: | 245-574 |
| Cow position: | chr7:42871276-42871607 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 213 |
| Conread position: | 245-574 |
| Cow position: | chr7:57211297-57211614 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 42 |
| Conread position: | 245-574 |
| Cow position: | chr7:58994717-58995035 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 43, 219 |
| Conread position: | 245-574 |
| Cow position: | chr7:67429706-67430030 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 75, 10 |
| Conread position: | 245-576 |
| Cow position: | chr7:41875143-41874813 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 246-574 |
| Cow position: | chr7:59679986-59680310 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 145 |
| Conread position: | 246-574 |
| Cow position: | chr7:67813640-67813958 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 149, 15 |
| Conread position: | 250-573 |
| Cow position: | chr7:23038385-23038065 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 144, 69 |
| Conread position: | 254-574 |
| Cow position: | chr7:526118-526430 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 18 |
| Conread position: | 255-572 |
| Cow position: | chr7:20060626-20060946 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 255-572 |
| Cow position: | chr7:22758524-22758831 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 257-572 |
| Cow position: | chr7:65811966-65812283 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 260-574 |
| Cow position: | chr7:3156615-3156933 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 265-574 |
| Cow position: | chr7:54649049-54649361 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 265-574 |
| Cow position: | chr7:57084097-57084392 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 132 |
| Conread position: | 267-574 |
| Cow position: | chr7:20370074-20369771 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 192 |
| Conread position: | 267-575 |
| Cow position: | chr7:6646-6946 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 20 |
| Conread position: | 271-576 |
| Cow position: | chr7:67489856-67490156 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 279-574 |
| Cow position: | chr7:14695202-14695490 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 290-573 |
| Cow position: | chr7:61578684-61578962 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 175 |
| Conread position: | 305-574 |
| Cow position: | chr7:26460484-26460753 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 87, 163 |
| Conread position: | 309-572 |
| Cow position: | chr7:47975119-47974841 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 82, 216 |
| Conread position: | 313-574 |
| Cow position: | chr7:49829127-49828872 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 79, 120 |
| Conread position: | 321-572 |
| Cow position: | chr7:62445938-62445693 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 71, 206 |
| Conread position: | 323-574 |
| Cow position: | chr7:55041279-55041025 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 324-574 |
| Cow position: | chr7:445051-444798 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 332-574 |
| Cow position: | chr7:27788170-27788414 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 344-572 |
| Cow position: | chr7:30303180-30303415 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 51, 112 |
| Conread position: | 356-574 |
| Cow position: | chr7:18445506-18445292 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 359-573 |
| Cow position: | chr7:48805195-48804977 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 360-573 |
| Cow position: | chr7:61045974-61045762 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 390-574 |
| Cow position: | chr7:39793147-39793329 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 142, 63 |
| Conread position: | 393-574 |
| Cow position: | chr7:24934270-24934092 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 393-574 |
| Cow position: | chr7:39097262-39097084 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 415-574 |
| Cow position: | chr7:60856752-60856594 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 423-573 |
| Cow position: | chr7:34417169-34417018 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 435-572 |
| Cow position: | chr7:31095945-31095808 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.