Cow genome map


           Conread name:
           rnmm31c_p11.y1
        

               Conread position:
               230-572
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 15
               

               Conread position:
               232-572
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 13
               

               Conread position:
               234-574
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 11
               

               Conread position:
               234-574
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 11
               

               Conread position:
               236-573
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               160, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 13
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               236-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               236-576
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               238-570
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 7
               

               Conread position:
               238-574
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 7
               

               Conread position:
               239-574
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               245-571
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 231
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 53
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 19
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 178
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 185
               

               Conread position:
               249-574
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 263
               

               Conread position:
               250-572
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               252-575
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 20
               

               Conread position:
               253-574
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 91
               

               Conread position:
               257-574
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               263-573
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 57
               

               Conread position:
               264-570
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               265-574
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 40
               

               Conread position:
               266-568
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 187
               

               Conread position:
               270-574
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 266
               

               Conread position:
               276-574
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 17
               

               Conread position:
               281-570
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               302-572
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               7, 51
               

               Conread position:
               302-574
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               89, 12
               

               Conread position:
               305-572
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               48, 171
               

               Conread position:
               323-574
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               60, 133
               

               Conread position:
               338-574
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               340-574
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               344-574
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 68
               

               Conread position:
               370-574
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               393-572
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 126
               

               Conread position:
               413-574
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               418-574
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               425-574
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 47
               

               Conread position:
               434-574
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               434-576
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               435-572
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-574
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 83
               

               Conread position:
               464-573
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.