Cow genome map

Conread name: rnmm33c_a1.y1

Conread position: 1-186
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 102, 29

Conread position: 1-217
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 102, 29

Conread position: 1-227
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 24, 70

Conread position: 1-230
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 100, 65

Conread position: 1-232
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 42

Conread position: 1-238
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 38

Conread position: 1-238
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 32

Conread position: 1-246
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 32

Conread position: 1-257
Cow position:
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 131

Conread position: 1-263
Cow position:
Alignm length: 278
Alignm identity: 204
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 21, 137

Conread position: 1-267
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 172

Conread position: 1-269
Cow position:
Alignm length: 275
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 58

Conread position: 1-269
Cow position:
Alignm length: 282
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 42

Conread position: 1-269
Cow position:
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 1-269
Cow position:
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 149

Conread position: 1-276
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 100, 29

Conread position: 1-282
Cow position:
Alignm length: 300
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 93

Conread position: 1-299
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 199

Conread position: 1-299
Cow position:
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 1-299
Cow position:
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 42

Conread position: 1-299
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 104

Conread position: 1-307
Cow position:
Alignm length: 317
Alignm identity: 221
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 31, 194

Conread position: 1-313
Cow position:
Alignm length: 320
Alignm identity: 232
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 17, 70

Conread position: 4-217
Cow position:
Alignm length: 216
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 159, 146

Conread position: 4-233
Cow position:
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 74

Conread position: 4-238
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 65

Conread position: 4-241
Cow position:
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 208

Conread position: 4-256
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 57

Conread position: 4-256
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 29

Conread position: 4-257
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 30, 82

Conread position: 4-262
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 4-263
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 58, 13

Conread position: 4-276
Cow position:
Alignm length: 282
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 99, 26

Conread position: 4-281
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 39

Conread position: 4-303
Cow position:
Alignm length: 312
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 29

Conread position: 4-306
Cow position:
Alignm length: 319
Alignm identity: 229
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 19, 130

Conread position: 4-307
Cow position:
Alignm length: 322
Alignm identity: 229
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 31

Conread position: 5-239
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 28

Conread position: 5-263
Cow position:
Alignm length: 266
Alignm identity: 198
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 38

Conread position: 5-299
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 28

Conread position: 5-299
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 29, 82

Conread position: 5-374
Cow position:
Alignm length: 383
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 28

Conread position: 8-257
Cow position:
Alignm length: 255
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 22

Conread position: 9-235
Cow position:
Alignm length: 235
Alignm identity: 171
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 34

Conread position: 11-276
Cow position:
Alignm length: 272
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 10

Conread position: 17-298
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 14

Conread position: 18-232
Cow position:
Alignm length: 220
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 85, 15

Conread position: 18-238
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 12, 0

Conread position: 18-238
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 91, 18

Conread position: 18-257
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 87, 12

Conread position: 18-313
Cow position:
Alignm length: 304
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 12

Conread position: 18-340
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 22

Conread position: 18-340
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 86, 12

Conread position: 20-293
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 84, 10

Conread position: 22-215
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 50

Conread position: 26-238
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 77, 140

Conread position: 28-238
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 171

Conread position: 33-238
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 78, 141

Conread position: 33-238
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 70, 52

Conread position: 33-263
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 29, 52

Conread position: 33-264
Cow position:
Alignm length: 240
Alignm identity: 181
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 70, 0

Conread position: 33-267
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 156

Conread position: 33-268
Cow position:
Alignm length: 244
Alignm identity: 179
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 70, 158

Conread position: 33-274
Cow position:
Alignm length: 258
Alignm identity: 184
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 29, 168

Conread position: 33-299
Cow position:
Alignm length: 278
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 35

Conread position: 33-299
Cow position:
Alignm length: 276
Alignm identity: 207
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 70, 35

Conread position: 34-237
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 69, 0

Conread position: 34-238
Cow position:
Alignm length: 207
Alignm identity: 167
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 69, 101

Conread position: 34-238
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 69, 34

Conread position: 34-255
Cow position:
Alignm length: 229
Alignm identity: 176
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 17, 44

Conread position: 34-257
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 69, 123

Conread position: 34-263
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 9, 158

Conread position: 35-269
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 32

Conread position: 36-221
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 67, 32

Conread position: 36-238
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 67, 155

Conread position: 36-262
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 67, 18

Conread position: 36-269
Cow position:
Alignm length: 243
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 136

Conread position: 36-305
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 40, 81

Conread position: 37-238
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 164

Conread position: 37-288
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 201, 86

Conread position: 38-238
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 157, 32

Conread position: 38-257
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 39-247
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 56

Conread position: 40-257
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 64, 32

Conread position: 40-313
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 86, 111

Conread position: 41-238
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 154

Conread position: 41-247
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 100

Conread position: 41-257
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 18

Conread position: 42-317
Cow position:
Alignm length: 283
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 23

Conread position: 46-263
Cow position:
Alignm length: 229
Alignm identity: 179
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 16, 147

Conread position: 46-269
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 144, 44

Conread position: 47-257
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 88

Conread position: 47-307
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 57, 79

Conread position: 48-267
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 57, 87

Conread position: 48-269
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 82, 131

Conread position: 49-238
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 54, 139

Conread position: 54-264
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 49, 73

Conread position: 56-256
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 5

Conread position: 57-306
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 76, 43

Conread position: 58-238
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 58-299
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 73

Conread position: 59-257
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 9

Conread position: 61-307
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 91

Conread position: 62-299
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 115

Conread position: 70-278
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 121

Conread position: 78-236
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 80-257
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 91

Conread position: 81-299
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 110

Conread position: 87-262
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 68

Conread position: 87-307
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 88-263
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 13, 103

Conread position: 93-266
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 98

Conread position: 101-257
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 90

Conread position: 103-299
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 80, 169

Conread position: 107-313
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 23

Conread position: 110-267
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 86, 77

Conread position: 112-262
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 77

Conread position: 120-299
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 5

Conread position: 120-299
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 5

Conread position: 150-276
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 39

Show alignments to all cow chromosomes.