Cow genome map


           Conread name:
           rnmm33c_a1.y1
        

               Conread position:
               1-136
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               141, 31
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               102, 29
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 200
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               56, 197
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               70, 29
               

               Conread position:
               1-255
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               32, 197
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 190
               

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 199
               

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 155
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               258
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               3-256
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               4-214
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 197
               

               Conread position:
               4-229
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               4-230
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               99, 28
               

               Conread position:
               4-232
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               30, 68
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               4-263
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               4-263
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               4-264
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               4-276
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               4-276
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               99, 37
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               99, 37
               

               Conread position:
               4-296
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               30, 195
               

               Conread position:
               4-297
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               4-298
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 255
               

               Conread position:
               4-299
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               4-299
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               4-299
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 194
               

               Conread position:
               4-304
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               4-307
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               30, 114
               

               Conread position:
               4-307
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               28, 263
               

               Conread position:
               4-317
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 41
               

               Conread position:
               5-229
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               26, 153
               

               Conread position:
               5-257
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               96, 24
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               172, 24
               

               Conread position:
               6-298
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               26, 185
               

               Conread position:
               7-307
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               9-238
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               13-263
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               90, 124
               

               Conread position:
               13-266
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               96, 17
               

               Conread position:
               14-257
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               16-284
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               87, 52
               

               Conread position:
               17-264
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 13
               

               Conread position:
               18-238
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               93, 12
               

               Conread position:
               18-256
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               85, 174
               

               Conread position:
               18-282
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               18-284
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               18-299
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 124
               

               Conread position:
               18-304
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               93, 12
               

               Conread position:
               19-267
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               119, 11
               

               Conread position:
               19-279
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               84, 21
               

               Conread position:
               20-305
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               25-300
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               28-263
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               75, 40
               

               Conread position:
               31-305
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               72, 238
               

               Conread position:
               32-267
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               79, 38
               

               Conread position:
               33-230
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               70, 56
               

               Conread position:
               33-238
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 165
               

               Conread position:
               33-255
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               70, 162
               

               Conread position:
               33-257
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               68, 9
               

               Conread position:
               33-307
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               70, 240
               

               Conread position:
               36-255
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               67, 113
               

               Conread position:
               37-275
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               66, 18
               

               Conread position:
               37-299
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               125, 31
               

               Conread position:
               38-238
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               38-306
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               65, 30
               

               Conread position:
               40-269
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               64, 98
               

               Conread position:
               41-299
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               33, 53
               

               Conread position:
               42-267
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               26, 148
               

               Conread position:
               42-299
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               29, 233
               

               Conread position:
               44-263
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               46-264
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               57, 6
               

               Conread position:
               57-269
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 80
               

               Conread position:
               58-251
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               59-299
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               44, 131
               

               Conread position:
               68-238
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               68-307
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               35, 91
               

               Conread position:
               78-247
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 113
               

               Conread position:
               78-257
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               87-257
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               91-270
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               105, 95
               

               Conread position:
               92-293
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               93-307
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               104-358
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               133, 8
               

               Conread position:
               111-267
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               115-307
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 143
               

               Conread position:
               120-238
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 5
               

               Conread position:
               120-257
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               123, 5
               

               Conread position:
               121-241
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               124-238
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               142-288
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 0
               
Show alignments to all cow chromosomes.