Cow genome map

Conread name: rnmm33c_a1.y1

Conread position: 1-145
Cow position: chr14:13723260-13723405 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 30

Conread position: 1-235
Cow position: chr14:19193681-19193912 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 102, 27

Conread position: 1-238
Cow position: chr14:7291131-7290900 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 104, 19

Conread position: 1-257
Cow position: chr14:12249857-12250117 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 32

Conread position: 1-257
Cow position: chr14:43046481-43046228 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 67, 29

Conread position: 1-263
Cow position: chr14:20600721-20600460 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 32

Conread position: 1-263
Cow position: chr14:41479319-41479588 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 32

Conread position: 1-264
Cow position: chr14:41756598-41756332 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 42

Conread position: 1-267
Cow position: chr14:25403605-25403865 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 17, 31

Conread position: 1-297
Cow position: chr14:18345394-18345686 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 103, 29

Conread position: 1-299
Cow position: chr14:27848540-27848238 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 33, 195

Conread position: 1-300
Cow position: chr14:21284966-21284665 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 29

Conread position: 1-302
Cow position: chr14:44742047-44742346 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 32

Conread position: 1-307
Cow position: chr14:6599613-6599921 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 132

Conread position: 1-307
Cow position: chr14:36437144-36437450 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 32

Conread position: 1-317
Cow position: chr14:43452840-43453155 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 32

Conread position: 3-267
Cow position: chr14:24992150-24991893 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 118

Conread position: 3-327
Cow position: chr14:20640283-20640615 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 20, 30

Conread position: 4-132
Cow position: chr14:37236811-37236684 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 25

Conread position: 4-154
Cow position: chr14:23080188-23080338 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 99, 33

Conread position: 4-223
Cow position: chr14:27865801-27866021 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 99, 23

Conread position: 4-229
Cow position: chr14:12546252-12546475 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 29

Conread position: 4-238
Cow position: chr14:1727727-1727966 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 197

Conread position: 4-238
Cow position: chr14:6490365-6490604 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 4-238
Cow position: chr14:17013845-17013606 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 103

Conread position: 4-238
Cow position: chr14:35650865-35651103 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 89

Conread position: 4-238
Cow position: chr14:40346841-40347059 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 19, 39

Conread position: 4-238
Cow position: chr14:48492448-48492688 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 29

Conread position: 4-255
Cow position: chr14:12483974-12484218 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 67

Conread position: 4-268
Cow position: chr14:50027542-50027289 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 239, 24

Conread position: 4-269
Cow position: chr14:20712345-20712622 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 4-276
Cow position: chr14:35420423-35420701 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 99, 26

Conread position: 4-284
Cow position: chr14:8754661-8754385 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 99, 27

Conread position: 4-296
Cow position: chr14:35047909-35047621 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 19

Conread position: 4-307
Cow position: chr14:24683802-24684096 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 99, 26

Conread position: 4-316
Cow position: chr14:40230300-40230614 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 39

Conread position: 4-350
Cow position: chr14:33828481-33828157 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 234, 26

Conread position: 5-230
Cow position: chr14:25695716-25695490 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 125

Conread position: 5-307
Cow position: chr14:20009982-20010275 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 100, 21

Conread position: 5-356
Cow position: chr14:31734520-31734867 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 25

Conread position: 7-285
Cow position: chr14:21201496-21201788 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 26

Conread position: 9-298
Cow position: chr14:20016375-20016662 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 15, 130

Conread position: 16-269
Cow position: chr14:10858755-10858501 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 87, 172

Conread position: 18-263
Cow position: chr14:19222199-19221955 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 134, 20

Conread position: 18-276
Cow position: chr14:26880486-26880745 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 85, 12

Conread position: 18-315
Cow position: chr14:24237138-24236854 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 101, 12

Conread position: 21-257
Cow position: chr14:49021585-49021822 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 141, 47

Conread position: 33-226
Cow position: chr14:1796590-1796404 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 162, 35

Conread position: 33-238
Cow position: chr14:20932925-20932716 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 70, 165

Conread position: 33-257
Cow position: chr14:14466172-14466391 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 36

Conread position: 33-263
Cow position: chr14:3564580-3564355 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 69

Conread position: 33-263
Cow position: chr14:15518072-15518306 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 70, 21

Conread position: 33-266
Cow position: chr14:33247131-33247361 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 70, 102

Conread position: 33-280
Cow position: chr14:23712993-23712751 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 70, 157

Conread position: 33-307
Cow position: chr14:5221980-5222255 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 70, 142

Conread position: 34-282
Cow position: chr14:4109167-4109418 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 158

Conread position: 34-299
Cow position: chr14:24581229-24580972 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 70, 34

Conread position: 36-238
Cow position: chr14:23107630-23107429 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 54

Conread position: 36-269
Cow position: chr14:14280721-14280482 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 142, 74

Conread position: 36-269
Cow position: chr14:44878482-44878719 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 107, 153

Conread position: 36-299
Cow position: chr14:14187637-14187374 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 68, 122

Conread position: 36-299
Cow position: chr14:27312728-27312467 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 68, 75

Conread position: 39-262
Cow position: chr14:48412576-48412805 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 153

Conread position: 40-262
Cow position: chr14:19624390-19624160 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 63, 159

Conread position: 42-256
Cow position: chr14:50589094-50589302 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 12

Conread position: 42-257
Cow position: chr14:49929437-49929661 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 39

Conread position: 42-264
Cow position: chr14:12613805-12614021 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 154, 33

Conread position: 42-307
Cow position: chr14:38295978-38296246 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 61, 131

Conread position: 44-263
Cow position: chr14:13810233-13810011 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 96

Conread position: 47-299
Cow position: chr14:24922399-24922142 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 57, 147

Conread position: 51-238
Cow position: chr14:8006049-8006225 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 33

Conread position: 55-313
Cow position: chr14:48446875-48447139 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 137

Conread position: 57-237
Cow position: chr14:41190597-41190773 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 81

Conread position: 59-270
Cow position: chr14:34355421-34355628 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 184, 47

Conread position: 60-262
Cow position: chr14:24981734-24981529 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 43, 61

Conread position: 60-299
Cow position: chr14:19129791-19129550 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 131

Conread position: 62-307
Cow position: chr14:3868152-3868392 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 74

Conread position: 67-279
Cow position: chr14:50055674-50055449 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 87-257
Cow position: chr14:6175836-6175664 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 74

Conread position: 91-230
Cow position: chr14:24839926-24840066 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 12, 99

Conread position: 91-257
Cow position: chr14:27919489-27919657 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 53

Conread position: 93-256
Cow position: chr14:33643544-33643701 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 56

Conread position: 102-269
Cow position: chr14:22952761-22952926 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 141, 32

Conread position: 102-307
Cow position: chr14:14948973-14949177 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 156

Conread position: 102-312
Cow position: chr14:20110483-20110690 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 91

Conread position: 107-296
Cow position: chr14:37435064-37435257 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 111

Conread position: 112-298
Cow position: chr14:26490517-26490697 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 125, 58

Conread position: 125-307
Cow position: chr14:26190886-26191068 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 84

Conread position: 142-247
Cow position: chr14:8936452-8936558 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.