Cow genome map


           Conread name:
           rnmm33c_a1.y1
        

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               33, 138
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 29
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               110, 29
               

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 50
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               1-299
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               33, 283
               

               Conread position:
               1-299
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               24, 34
               

               Conread position:
               1-299
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 30
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               3-299
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               31, 67
               

               Conread position:
               4-227
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               99, 64
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               4-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 64
               

               Conread position:
               4-255
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               4-257
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               159, 26
               

               Conread position:
               4-257
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               99, 26
               

               Conread position:
               4-263
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 127
               

               Conread position:
               4-263
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               19, 194
               

               Conread position:
               4-264
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               30, 64
               

               Conread position:
               4-269
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               30, 185
               

               Conread position:
               4-271
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               4-299
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               4-306
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               180, 11
               

               Conread position:
               4-313
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               97, 26
               

               Conread position:
               4-317
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               30, 146
               

               Conread position:
               5-218
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               98, 25
               

               Conread position:
               5-238
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               5-255
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               5-307
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               6-259
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               7-254
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               18-202
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               18-227
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               178, 12
               

               Conread position:
               18-238
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               87, 12
               

               Conread position:
               18-247
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               18-256
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               18-257
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               18-263
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               85, 48
               

               Conread position:
               18-299
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               18-307
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               19-269
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 11
               

               Conread position:
               19-299
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               8, 36
               

               Conread position:
               21-238
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               82, 169
               

               Conread position:
               22-262
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               31-264
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               113, 37
               

               Conread position:
               33-230
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               71, 35
               

               Conread position:
               33-264
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               34-305
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               69, 158
               

               Conread position:
               35-257
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 166
               

               Conread position:
               35-299
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               36-263
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               36-270
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               73, 85
               

               Conread position:
               36-278
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               36-299
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               36-313
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               67, 23
               

               Conread position:
               38-215
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               140, 23
               

               Conread position:
               38-238
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               65, 155
               

               Conread position:
               38-241
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               24, 152
               

               Conread position:
               39-238
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               64, 99
               

               Conread position:
               39-264
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               66, 27
               

               Conread position:
               39-306
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               65, 148
               

               Conread position:
               40-238
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 116
               

               Conread position:
               42-257
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               69, 7
               

               Conread position:
               44-242
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               59, 132
               

               Conread position:
               44-263
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               59, 108
               

               Conread position:
               46-238
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 148
               

               Conread position:
               46-262
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               57, 35
               

               Conread position:
               46-313
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 89
               

               Conread position:
               49-255
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               54, 139
               

               Conread position:
               50-263
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 150
               

               Conread position:
               59-241
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 9
               

               Conread position:
               61-230
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 107
               

               Conread position:
               61-264
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               42, 93
               

               Conread position:
               61-299
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               42, 91
               

               Conread position:
               62-291
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               135, 125
               

               Conread position:
               63-237
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               67-235
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               36, 123
               

               Conread position:
               67-254
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               36, 125
               

               Conread position:
               70-238
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               74-238
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               81-346
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               22, 181
               

               Conread position:
               85-238
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 58
               

               Conread position:
               88-269
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               7, 103
               

               Conread position:
               98-302
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               30, 100
               

               Conread position:
               102-239
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               102-275
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               113-296
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               120-229
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               76, 5
               

               Conread position:
               122-276
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 142
               

               Conread position:
               122-299
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               126-307
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 148
               
Show alignments to all cow chromosomes.