Cow genome map

Conread name: rnmm33c_a1.y1

Conread position: 1-238
Cow position: chr18:49665486-49665250 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 22, 143

Conread position: 1-254
Cow position: chr18:9818511-9818765 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 102, 29

Conread position: 1-257
Cow position: chr18:11867024-11867266 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 30

Conread position: 1-257
Cow position: chr18:29058821-29058564 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 102, 29

Conread position: 1-263
Cow position: chr18:4707616-4707346 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 100, 197

Conread position: 1-263
Cow position: chr18:20174459-20174193 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 31

Conread position: 1-263
Cow position: chr18:33606301-33606567 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 137

Conread position: 1-267
Cow position: chr18:3098641-3098378 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 42

Conread position: 1-269
Cow position: chr18:11322260-11322537 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 244

Conread position: 1-269
Cow position: chr18:51406224-51405964 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 102, 29

Conread position: 1-274
Cow position: chr18:42966509-42966811 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 1-299
Cow position: chr18:19645849-19646140 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 102, 36

Conread position: 1-299
Cow position: chr18:37023885-37023585 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 66

Conread position: 1-313
Cow position: chr18:25626695-25627006 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 69

Conread position: 4-217
Cow position: chr18:41238546-41238760 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 54

Conread position: 4-230
Cow position: chr18:13172851-13172616 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 4-235
Cow position: chr18:55701971-55701747 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 8

Conread position: 4-252
Cow position: chr18:22121206-22120956 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 99, 27

Conread position: 4-268
Cow position: chr18:19193671-19193425 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 193, 36

Conread position: 4-273
Cow position: chr18:5190005-5189739 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 19, 29

Conread position: 4-296
Cow position: chr18:7955822-7956108 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 64

Conread position: 4-299
Cow position: chr18:3158926-3158632 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 192, 63

Conread position: 4-304
Cow position: chr18:36458608-36458912 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 21, 40

Conread position: 4-307
Cow position: chr18:35636673-35636373 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 99, 26

Conread position: 5-257
Cow position: chr18:24342300-24342548 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 30, 134

Conread position: 5-267
Cow position: chr18:43284076-43283818 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 98, 51

Conread position: 5-276
Cow position: chr18:52637859-52637573 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 20, 279

Conread position: 5-299
Cow position: chr18:14815660-14815377 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 134

Conread position: 7-238
Cow position: chr18:49161779-49161535 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 9-288
Cow position: chr18:31672824-31672550 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 22

Conread position: 10-238
Cow position: chr18:23447403-23447173 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 180

Conread position: 10-239
Cow position: chr18:19362606-19362376 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 44

Conread position: 15-283
Cow position: chr18:24022072-24022333 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 88, 15

Conread position: 17-273
Cow position: chr18:36445122-36445384 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 86, 13

Conread position: 18-218
Cow position: chr18:51179054-51178856 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 85, 12

Conread position: 18-238
Cow position: chr18:12118154-12117934 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 12

Conread position: 18-255
Cow position: chr18:3180110-3180342 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 12

Conread position: 18-299
Cow position: chr18:7950804-7951080 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 23

Conread position: 21-257
Cow position: chr18:1144502-1144256 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 48

Conread position: 22-218
Cow position: chr18:45395693-45395894 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 5, 139

Conread position: 31-257
Cow position: chr18:18919251-18919027 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 79

Conread position: 31-266
Cow position: chr18:56159167-56159400 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 82, 57

Conread position: 33-225
Cow position: chr18:4649031-4648846 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 71, 92

Conread position: 33-238
Cow position: chr18:4858205-4857995 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 88

Conread position: 33-238
Cow position: chr18:11166683-11166888 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 70, 161

Conread position: 33-248
Cow position: chr18:4624725-4624510 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 37

Conread position: 33-263
Cow position: chr18:13359766-13360000 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 61

Conread position: 34-238
Cow position: chr18:39115439-39115231 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 69, 158

Conread position: 34-269
Cow position: chr18:55789287-55789051 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 70, 158

Conread position: 35-238
Cow position: chr18:3115166-3115371 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 33

Conread position: 36-238
Cow position: chr18:30341456-30341266 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 59

Conread position: 36-257
Cow position: chr18:39434547-39434754 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 204, 51

Conread position: 36-262
Cow position: chr18:46048472-46048694 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 67, 18

Conread position: 36-302
Cow position: chr18:11680427-11680698 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 68, 156

Conread position: 37-269
Cow position: chr18:268103-267874 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 64, 78

Conread position: 37-307
Cow position: chr18:5995180-5995443 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 159, 57

Conread position: 40-238
Cow position: chr18:27388260-27388461 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 152

Conread position: 40-278
Cow position: chr18:55498777-55499018 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 37

Conread position: 45-257
Cow position: chr18:48453410-48453618 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 14

Conread position: 46-276
Cow position: chr18:2592456-2592219 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 57, 146

Conread position: 47-274
Cow position: chr18:51656335-51656097 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 47-306
Cow position: chr18:24946093-24945833 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 24

Conread position: 50-238
Cow position: chr18:21773210-21773405 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 128

Conread position: 50-297
Cow position: chr18:11691689-11691445 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 16

Conread position: 62-263
Cow position: chr18:1582542-1582343 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 30

Conread position: 67-263
Cow position: chr18:10322538-10322741 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 127

Conread position: 67-263
Cow position: chr18:35582364-35582165 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 121

Conread position: 102-263
Cow position: chr18:28823195-28823031 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 87

Conread position: 102-296
Cow position: chr18:219106-219302 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 85

Conread position: 109-262
Cow position: chr18:7415249-7415091 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 110-299
Cow position: chr18:2864217-2864025 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 167

Conread position: 112-275
Cow position: chr18:18815889-18815727 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 25

Conread position: 115-295
Cow position: chr18:18868530-18868716 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 76

Conread position: 116-299
Cow position: chr18:3211656-3211843 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 25, 80

Conread position: 120-257
Cow position: chr18:36184108-36183971 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 5

Conread position: 123-264
Cow position: chr18:7108920-7109065 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 67

Conread position: 137-299
Cow position: chr18:48828973-48828809 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 50

Show alignments to all cow chromosomes.