Cow genome map

Conread name: rnmm33c_a1.y1

Conread position: 1-222
Cow position: chr20:5950883-5950670 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 100, 28

Conread position: 1-238
Cow position: chr20:11614297-11614059 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 33, 209

Conread position: 1-238
Cow position: chr20:33170125-33169889 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 100, 39

Conread position: 1-255
Cow position: chr20:33144807-33144549 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 56

Conread position: 1-257
Cow position: chr20:19751057-19751313 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 102, 30

Conread position: 1-263
Cow position: chr20:23065091-23064819 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 22, 195

Conread position: 1-274
Cow position: chr20:9536883-9537160 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 29

Conread position: 1-291
Cow position: chr20:19410619-19410328 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 20, 32

Conread position: 1-299
Cow position: chr20:7659463-7659176 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 54

Conread position: 1-299
Cow position: chr20:35958395-35958689 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 19, 32

Conread position: 1-304
Cow position: chr20:15068894-15069192 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 102, 16

Conread position: 3-232
Cow position: chr20:40423342-40423112 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 192

Conread position: 4-222
Cow position: chr20:12048157-12048365 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 27

Conread position: 4-229
Cow position: chr20:39377391-39377179 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 40

Conread position: 4-232
Cow position: chr20:24398883-24398657 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 29

Conread position: 4-256
Cow position: chr20:5104685-5104436 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 26, 69

Conread position: 4-257
Cow position: chr20:18100168-18100418 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 28, 87

Conread position: 4-260
Cow position: chr20:42469516-42469767 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 99, 64

Conread position: 4-262
Cow position: chr20:6423714-6423982 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 107, 122

Conread position: 4-263
Cow position: chr20:6240780-6240510 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 195

Conread position: 4-264
Cow position: chr20:19236839-19237090 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 39

Conread position: 4-276
Cow position: chr20:17251460-17251740 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 39

Conread position: 4-299
Cow position: chr20:3781682-3781382 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 143

Conread position: 4-299
Cow position: chr20:35797355-35797653 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 29

Conread position: 4-299
Cow position: chr20:39418143-39417858 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 99, 27

Conread position: 4-305
Cow position: chr20:9473865-9473565 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 19, 29

Conread position: 4-307
Cow position: chr20:10884617-10884308 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 27

Conread position: 4-307
Cow position: chr20:19146619-19146926 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 19, 29

Conread position: 5-227
Cow position: chr20:36997467-36997692 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 36

Conread position: 5-229
Cow position: chr20:13751996-13752214 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 99, 31

Conread position: 5-267
Cow position: chr20:12334132-12334391 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 125

Conread position: 5-317
Cow position: chr20:33435412-33435104 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 25

Conread position: 6-313
Cow position: chr20:38817767-38818061 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 97, 23

Conread position: 9-238
Cow position: chr20:40256726-40256954 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 94, 22

Conread position: 9-305
Cow position: chr20:21714506-21714809 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 119

Conread position: 10-299
Cow position: chr20:6054755-6054468 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 21

Conread position: 12-340
Cow position: chr20:31740455-31740138 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 94, 18

Conread position: 17-238
Cow position: chr20:23679381-23679164 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 87, 13

Conread position: 17-299
Cow position: chr20:13967493-13967215 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 12

Conread position: 18-252
Cow position: chr20:19328166-19328402 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 22

Conread position: 18-276
Cow position: chr20:20312971-20312725 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 85, 12

Conread position: 18-287
Cow position: chr20:17734007-17733738 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 85, 12

Conread position: 18-299
Cow position: chr20:12996243-12995964 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 12

Conread position: 20-238
Cow position: chr20:41703922-41704149 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 85, 10

Conread position: 31-255
Cow position: chr20:11741526-11741297 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 37

Conread position: 32-315
Cow position: chr20:11482361-11482071 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 71, 166

Conread position: 33-257
Cow position: chr20:14572579-14572358 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 126

Conread position: 33-257
Cow position: chr20:24391766-24391985 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 70, 40

Conread position: 33-263
Cow position: chr20:37200139-37200371 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 34

Conread position: 33-267
Cow position: chr20:11923460-11923227 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 9

Conread position: 33-293
Cow position: chr20:8910703-8910955 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 102

Conread position: 33-313
Cow position: chr20:28982477-28982756 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 38

Conread position: 34-263
Cow position: chr20:38578976-38578752 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 35

Conread position: 36-255
Cow position: chr20:7442342-7442124 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 103

Conread position: 36-256
Cow position: chr20:39675611-39675389 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 79

Conread position: 36-257
Cow position: chr20:14735459-14735681 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 68, 32

Conread position: 36-257
Cow position: chr20:14759882-14759655 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 69, 133

Conread position: 36-299
Cow position: chr20:29844837-29845092 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 75, 121

Conread position: 37-256
Cow position: chr20:26679907-26680130 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 66, 31

Conread position: 38-238
Cow position: chr20:16291255-16291455 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 30, 166

Conread position: 38-238
Cow position: chr20:30817321-30817518 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 107

Conread position: 38-257
Cow position: chr20:15235548-15235774 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 23

Conread position: 40-245
Cow position: chr20:28296076-28296281 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 71, 155

Conread position: 40-273
Cow position: chr20:14879572-14879810 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 148

Conread position: 43-255
Cow position: chr20:32069069-32068849 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 6, 150

Conread position: 43-255
Cow position: chr20:35907257-35907048 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 25

Conread position: 44-250
Cow position: chr20:35760461-35760668 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 108

Conread position: 44-277
Cow position: chr20:34251888-34251654 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 84

Conread position: 45-346
Cow position: chr20:33176973-33177282 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 224

Conread position: 52-267
Cow position: chr20:5269270-5269056 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 5

Conread position: 55-230
Cow position: chr20:8607119-8606942 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 136

Conread position: 59-257
Cow position: chr20:21928710-21928911 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 26

Conread position: 63-264
Cow position: chr20:13994618-13994825 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 40, 129

Conread position: 70-299
Cow position: chr20:14980698-14980468 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 6

Conread position: 70-302
Cow position: chr20:11864320-11864083 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 189

Conread position: 76-298
Cow position: chr20:37272538-37272755 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 52, 27

Conread position: 82-256
Cow position: chr20:3740172-3739999 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 156

Conread position: 86-268
Cow position: chr20:5636312-5636499 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 108

Conread position: 87-269
Cow position: chr20:28831796-28831986 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 106

Conread position: 89-238
Cow position: chr20:9701740-9701593 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 21

Conread position: 91-262
Cow position: chr20:41403406-41403587 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 91-282
Cow position: chr20:3321301-3321112 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 60

Conread position: 105-253
Cow position: chr20:9729937-9730080 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 83

Conread position: 110-230
Cow position: chr20:14917157-14917279 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 114-234
Cow position: chr20:30710789-30710665 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 79

Conread position: 115-296
Cow position: chr20:40446191-40446370 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 41, 154

Conread position: 119-229
Cow position: chr20:4332004-4332113 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 50

Conread position: 123-299
Cow position: chr20:4892952-4892771 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.