Cow genome map
| Conread name: | rnmm33c_a1.y1 |
| Conread position: | 1-238 |
| Cow position: | chr25:20403018-20402774 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 1-257 |
| Cow position: | chr25:9396156-9396405 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 1-257 |
| Cow position: | chr25:20394908-20395152 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 1-257 |
| Cow position: | chr25:33839089-33839340 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 33, 133 |
| Conread position: | 1-263 |
| Cow position: | chr25:1735609-1735350 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 1-276 |
| Cow position: | chr25:2110784-2111044 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 24, 34 |
| Conread position: | 1-277 |
| Cow position: | chr25:36779197-36779477 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 1-299 |
| Cow position: | chr25:8120478-8120779 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-340 |
| Cow position: | chr25:22530988-22531317 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 3-283 |
| Cow position: | chr25:6474397-6474111 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 4-119 |
| Cow position: | chr25:17191426-17191310 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 4-229 |
| Cow position: | chr25:2046847-2046629 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 4-269 |
| Cow position: | chr25:31733032-31732762 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 4-275 |
| Cow position: | chr25:12204174-12204447 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 4-278 |
| Cow position: | chr25:8347213-8347491 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 4-280 |
| Cow position: | chr25:14791460-14791734 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 36 |
| Conread position: | 4-304 |
| Cow position: | chr25:13569463-13569165 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 4-315 |
| Cow position: | chr25:1837947-1838255 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 5-223 |
| Cow position: | chr25:18490777-18490998 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 29, 139 |
| Conread position: | 5-269 |
| Cow position: | chr25:11585216-11585488 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 18-263 |
| Cow position: | chr25:21895166-21894920 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 18-264 |
| Cow position: | chr25:26654628-26654877 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 85, 12 |
| Conread position: | 19-263 |
| Cow position: | chr25:10366030-10365786 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 19 |
| Conread position: | 33-238 |
| Cow position: | chr25:6886243-6886034 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 33-239 |
| Cow position: | chr25:21266740-21266948 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 67, 160 |
| Conread position: | 33-256 |
| Cow position: | chr25:22297283-22297059 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 71, 93 |
| Conread position: | 33-263 |
| Cow position: | chr25:36081609-36081843 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 33-267 |
| Cow position: | chr25:14196589-14196830 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 159 |
| Conread position: | 33-275 |
| Cow position: | chr25:12824281-12824042 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 7, 106 |
| Conread position: | 33-276 |
| Cow position: | chr25:28188214-28187967 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 36-218 |
| Cow position: | chr25:40407732-40407552 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 36-316 |
| Cow position: | chr25:18487411-18487687 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 37-257 |
| Cow position: | chr25:13642578-13642351 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 38-263 |
| Cow position: | chr25:9961439-9961204 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 38-316 |
| Cow position: | chr25:17566326-17566606 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 66, 105 |
| Conread position: | 40-244 |
| Cow position: | chr25:17712275-17712480 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 112 |
| Conread position: | 46-263 |
| Cow position: | chr25:4002543-4002767 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 57, 147 |
| Conread position: | 53-232 |
| Cow position: | chr25:24008423-24008242 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 67-257 |
| Cow position: | chr25:6256170-6255976 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 69-293 |
| Cow position: | chr25:10218281-10218052 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 227 |
| Conread position: | 69-313 |
| Cow position: | chr25:36033206-36033447 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 93-264 |
| Cow position: | chr25:16714480-16714303 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 59 |
| Conread position: | 101-244 |
| Cow position: | chr25:20133512-20133369 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 91 |
| Conread position: | 103-299 |
| Cow position: | chr25:12755686-12755491 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 110-276 |
| Cow position: | chr25:13672200-13672372 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 20, 84 |
| Conread position: | 119-269 |
| Cow position: | chr25:15440958-15440804 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 71, 5 |
| Conread position: | 120-307 |
| Cow position: | chr25:17342276-17342462 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 5 |
| Conread position: | 148-269 |
| Cow position: | chr25:22332612-22332737 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.