Cow genome map


           Conread name:
           rnmm33c_a1.y1
        

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               33, 192
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 73
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               151, 30
               

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               1-299
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               102, 30
               

               Conread position:
               3-298
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 136
               

               Conread position:
               4-229
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               30, 182
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               4-269
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               4-299
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               99, 26
               

               Conread position:
               4-307
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               21, 65
               

               Conread position:
               5-274
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               23, 64
               

               Conread position:
               5-299
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               6-229
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               9-236
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               9-238
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               126, 25
               

               Conread position:
               9-257
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               9-276
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               15-266
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               13, 124
               

               Conread position:
               17-251
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               87, 13
               

               Conread position:
               18-257
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               18-298
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               178, 17
               

               Conread position:
               33-269
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               163, 67
               

               Conread position:
               34-215
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 168
               

               Conread position:
               34-257
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               35-299
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 159
               

               Conread position:
               36-263
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               32, 98
               

               Conread position:
               36-269
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               67, 106
               

               Conread position:
               41-238
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               63, 154
               

               Conread position:
               41-238
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 154
               

               Conread position:
               41-241
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               154, 72
               

               Conread position:
               41-241
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               154, 72
               

               Conread position:
               41-269
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 151
               

               Conread position:
               42-238
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               70, 113
               

               Conread position:
               45-314
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               58, 23
               

               Conread position:
               46-263
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               57, 196
               

               Conread position:
               50-263
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               51-229
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 26
               

               Conread position:
               52-307
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               55-238
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               48, 141
               

               Conread position:
               57-236
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               57-267
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               67-281
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               36, 122
               

               Conread position:
               72-299
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 88
               

               Conread position:
               102-264
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               136, 25
               

               Conread position:
               102-267
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               102-269
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 85
               

               Conread position:
               103-238
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               118-281
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 56
               
Show alignments to all cow chromosomes.