Cow genome map
| Conread name: | rnmm33c_a1.y1 |
| Conread position: | 1-198 |
| Cow position: | chr26:11361712-11361508 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 1-205 |
| Cow position: | chr26:13774219-13774409 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 1-220 |
| Cow position: | chr26:30752144-30751923 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-232 |
| Cow position: | chr26:13270958-13270722 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 33, 192 |
| Conread position: | 1-238 |
| Cow position: | chr26:3072242-3072008 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 1-238 |
| Cow position: | chr26:7961352-7961589 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 1-238 |
| Cow position: | chr26:27063950-27063713 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 1-253 |
| Cow position: | chr26:21418733-21418477 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 19, 42 |
| Conread position: | 1-253 |
| Cow position: | chr26:31889811-31890069 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 1-257 |
| Cow position: | chr26:16796510-16796253 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 151, 30 |
| Conread position: | 1-263 |
| Cow position: | chr26:12155388-12155132 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 1-280 |
| Cow position: | chr26:19459395-19459689 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 1-299 |
| Cow position: | chr26:6447887-6447582 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 1-316 |
| Cow position: | chr26:25393752-25394064 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 3-298 |
| Cow position: | chr26:32013352-32013647 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 4-229 |
| Cow position: | chr26:20256568-20256790 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 4-238 |
| Cow position: | chr26:2531451-2531223 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 4-238 |
| Cow position: | chr26:6188019-6188251 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 182 |
| Conread position: | 4-238 |
| Cow position: | chr26:30806789-30806548 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 4-238 |
| Cow position: | chr26:31701538-31701779 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 4-269 |
| Cow position: | chr26:34108494-34108751 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 4-299 |
| Cow position: | chr26:16167187-16166900 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 4-307 |
| Cow position: | chr26:7642854-7642550 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 5-274 |
| Cow position: | chr26:9867390-9867123 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 5-299 |
| Cow position: | chr26:11134972-11134671 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 6-229 |
| Cow position: | chr26:12890023-12890238 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 9-236 |
| Cow position: | chr26:32682842-32683074 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 24 |
| Conread position: | 9-238 |
| Cow position: | chr26:2702284-2702056 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 126, 25 |
| Conread position: | 9-257 |
| Cow position: | chr26:32776778-32776528 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 9-276 |
| Cow position: | chr26:21351423-21351687 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 15-266 |
| Cow position: | chr26:8810866-8811118 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 17-251 |
| Cow position: | chr26:28442266-28442036 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 87, 13 |
| Conread position: | 18-257 |
| Cow position: | chr26:33567301-33567066 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 85, 12 |
| Conread position: | 18-298 |
| Cow position: | chr26:20260329-20260602 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 178, 17 |
| Conread position: | 33-269 |
| Cow position: | chr26:29332853-29333083 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 163, 67 |
| Conread position: | 34-215 |
| Cow position: | chr26:8746081-8745892 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 168 |
| Conread position: | 34-257 |
| Cow position: | chr26:10768147-10767932 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 35-299 |
| Cow position: | chr26:3182194-3181924 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 68, 159 |
| Conread position: | 36-263 |
| Cow position: | chr26:613917-613692 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 32, 98 |
| Conread position: | 36-269 |
| Cow position: | chr26:33160741-33160508 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 67, 106 |
| Conread position: | 41-238 |
| Cow position: | chr26:6793702-6793900 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 63, 154 |
| Conread position: | 41-238 |
| Cow position: | chr26:31061961-31062156 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 154 |
| Conread position: | 41-241 |
| Cow position: | chr26:9850332-9850140 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 154, 72 |
| Conread position: | 41-241 |
| Cow position: | chr26:9853842-9853650 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 154, 72 |
| Conread position: | 41-269 |
| Cow position: | chr26:20846384-20846617 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 62, 151 |
| Conread position: | 42-238 |
| Cow position: | chr26:30034643-30034449 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 70, 113 |
| Conread position: | 45-314 |
| Cow position: | chr26:17057448-17057714 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 46-263 |
| Cow position: | chr26:6793906-6794132 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 196 |
| Conread position: | 50-263 |
| Cow position: | chr26:21242874-21243087 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 51-229 |
| Cow position: | chr26:26200616-26200792 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 98, 26 |
| Conread position: | 52-307 |
| Cow position: | chr26:19774531-19774276 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 55-238 |
| Cow position: | chr26:23080784-23080595 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 141 |
| Conread position: | 57-236 |
| Cow position: | chr26:25245200-25245027 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 57-267 |
| Cow position: | chr26:15200739-15200526 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 67-281 |
| Cow position: | chr26:8186437-8186653 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 72-299 |
| Cow position: | chr26:25526038-25526264 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 102-264 |
| Cow position: | chr26:35448886-35449046 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 136, 25 |
| Conread position: | 102-267 |
| Cow position: | chr26:30568833-30568668 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 23 |
| Conread position: | 102-269 |
| Cow position: | chr26:27761826-27761663 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 85 |
| Conread position: | 103-238 |
| Cow position: | chr26:25073898-25074036 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 118-281 |
| Cow position: | chr26:10973950-10974121 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 56 |
Show alignments to all cow chromosomes.