Cow genome map

Conread name: rnmm33c_a1.y1

Conread position: 1-214
Cow position: chr27:9337766-9337557 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 100, 36

Conread position: 1-215
Cow position: chr27:31230842-31231054 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 102, 66

Conread position: 1-228
Cow position: chr27:19718169-19717948 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 102, 32

Conread position: 1-238
Cow position: chr27:16620241-16620004 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 29

Conread position: 1-238
Cow position: chr27:23632850-23632612 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 31

Conread position: 1-256
Cow position: chr27:2957657-2957400 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 102, 31

Conread position: 1-256
Cow position: chr27:15867640-15867392 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 33, 54

Conread position: 1-257
Cow position: chr27:16580873-16580615 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 104, 67

Conread position: 1-262
Cow position: chr27:30362496-30362235 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 42

Conread position: 1-276
Cow position: chr27:28931537-28931819 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 28

Conread position: 1-284
Cow position: chr27:29400069-29399782 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 100, 67

Conread position: 1-302
Cow position: chr27:732816-732521 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 110, 36

Conread position: 2-257
Cow position: chr27:23454898-23455161 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 104, 28

Conread position: 2-299
Cow position: chr27:27843740-27844040 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 190

Conread position: 3-238
Cow position: chr27:8291759-8291989 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 29, 137

Conread position: 3-288
Cow position: chr27:6550702-6550420 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 30

Conread position: 4-215
Cow position: chr27:31147423-31147637 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 21, 30

Conread position: 4-235
Cow position: chr27:26436624-26436862 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 68

Conread position: 4-238
Cow position: chr27:1903313-1903075 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 209

Conread position: 4-238
Cow position: chr27:18507882-18507658 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 140

Conread position: 4-257
Cow position: chr27:8942436-8942689 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 99, 26

Conread position: 4-257
Cow position: chr27:23128704-23128450 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 42

Conread position: 4-257
Cow position: chr27:23930214-23929970 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 56

Conread position: 4-257
Cow position: chr27:28921649-28921903 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 26

Conread position: 4-267
Cow position: chr27:7958585-7958857 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 29

Conread position: 4-299
Cow position: chr27:28018584-28018296 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 101, 25

Conread position: 4-317
Cow position: chr27:31372730-31373044 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 21, 35

Conread position: 5-225
Cow position: chr27:21977888-21978110 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 26

Conread position: 5-232
Cow position: chr27:22426581-22426810 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 28

Conread position: 5-238
Cow position: chr27:26427879-26428117 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 28

Conread position: 5-278
Cow position: chr27:27038593-27038864 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 18, 68

Conread position: 5-298
Cow position: chr27:27019854-27020147 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 35

Conread position: 6-256
Cow position: chr27:26807318-26807568 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 24

Conread position: 9-277
Cow position: chr27:11081441-11081170 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 34

Conread position: 11-248
Cow position: chr27:7934923-7935151 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 29

Conread position: 17-228
Cow position: chr27:30989607-30989819 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 44

Conread position: 17-238
Cow position: chr27:30989034-30988812 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 60, 44

Conread position: 17-267
Cow position: chr27:26398025-26398273 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 13

Conread position: 18-230
Cow position: chr27:29831455-29831666 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 93, 12

Conread position: 18-231
Cow position: chr27:16284706-16284492 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 22

Conread position: 18-257
Cow position: chr27:14902416-14902659 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 85, 12

Conread position: 18-259
Cow position: chr27:13875961-13875722 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 86, 12

Conread position: 18-291
Cow position: chr27:7412616-7412345 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 85, 12

Conread position: 18-299
Cow position: chr27:25380224-25379948 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 85, 24

Conread position: 18-307
Cow position: chr27:21408315-21408613 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 22, 235

Conread position: 20-230
Cow position: chr27:30890517-30890311 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 106, 12

Conread position: 31-241
Cow position: chr27:22771979-22771764 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 72, 5

Conread position: 31-263
Cow position: chr27:12429630-12429392 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 37

Conread position: 32-307
Cow position: chr27:27040830-27040552 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 243

Conread position: 33-264
Cow position: chr27:28038117-28038354 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 163

Conread position: 33-277
Cow position: chr27:23554103-23554355 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 70, 21

Conread position: 33-298
Cow position: chr27:6500285-6500020 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 70, 213

Conread position: 33-299
Cow position: chr27:1353803-1353541 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 130, 34

Conread position: 33-299
Cow position: chr27:2592761-2592501 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 68, 33

Conread position: 34-267
Cow position: chr27:27259827-27259596 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 69, 34

Conread position: 36-235
Cow position: chr27:22179580-22179775 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 68, 118

Conread position: 36-238
Cow position: chr27:19543692-19543892 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 69, 102

Conread position: 36-238
Cow position: chr27:30765249-30765052 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 102

Conread position: 36-262
Cow position: chr27:22498770-22498546 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 47, 59

Conread position: 37-238
Cow position: chr27:21452854-21453060 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 66, 31

Conread position: 37-299
Cow position: chr27:2682927-2683187 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 66, 117

Conread position: 38-267
Cow position: chr27:18558579-18558343 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 66, 135

Conread position: 38-283
Cow position: chr27:27640777-27641034 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 65, 30

Conread position: 40-229
Cow position: chr27:26163591-26163409 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 39

Conread position: 40-257
Cow position: chr27:12596969-12596759 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 198, 27

Conread position: 42-256
Cow position: chr27:30359606-30359403 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 44-313
Cow position: chr27:19388228-19387963 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 151

Conread position: 45-252
Cow position: chr27:29283203-29283410 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 9

Conread position: 46-274
Cow position: chr27:25277342-25277118 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 7

Conread position: 46-313
Cow position: chr27:1498521-1498260 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 191, 60

Conread position: 47-267
Cow position: chr27:13252215-13251992 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 56, 19

Conread position: 47-267
Cow position: chr27:18215262-18215036 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 147

Conread position: 48-307
Cow position: chr27:20552564-20552828 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 82

Conread position: 49-257
Cow position: chr27:29251084-29250872 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 54, 142

Conread position: 50-313
Cow position: chr27:19685511-19685768 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 95

Conread position: 54-235
Cow position: chr27:18030860-18031044 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 23

Conread position: 54-257
Cow position: chr27:21569644-21569849 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 50, 115

Conread position: 57-267
Cow position: chr27:28001622-28001826 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 39

Conread position: 57-299
Cow position: chr27:30843882-30844120 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 74, 54

Conread position: 61-307
Cow position: chr27:18739580-18739327 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 63-280
Cow position: chr27:20592174-20591956 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 203

Conread position: 71-257
Cow position: chr27:27550565-27550748 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 86

Conread position: 91-248
Cow position: chr27:27438342-27438502 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 97-263
Cow position: chr27:4011831-4011664 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 35

Conread position: 112-263
Cow position: chr27:23891078-23890927 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 28

Conread position: 125-288
Cow position: chr27:10395134-10395298 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 118, 23

Conread position: 157-307
Cow position: chr27:22559726-22559877 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 39, 111

Show alignments to all cow chromosomes.