Cow genome map

Conread name: rnmm33c_a1.y1

Conread position: 1-217
Cow position: chr3:79905232-79905022 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 32

Conread position: 1-238
Cow position: chr3:8147982-8147751 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 33, 15

Conread position: 1-238
Cow position: chr3:11640118-11640350 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 102, 19

Conread position: 1-238
Cow position: chr3:12323748-12323991 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 32

Conread position: 1-238
Cow position: chr3:26554034-26553797 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 55

Conread position: 1-238
Cow position: chr3:31206552-31206792 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 1-238
Cow position: chr3:67929586-67929344 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 24, 32

Conread position: 1-238
Cow position: chr3:79884806-79884565 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 32

Conread position: 1-245
Cow position: chr3:55085510-55085254 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 252

Conread position: 1-246
Cow position: chr3:18393704-18393464 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 22, 58

Conread position: 1-256
Cow position: chr3:72675767-72676030 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 34

Conread position: 1-257
Cow position: chr3:61678371-61678633 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 32

Conread position: 1-257
Cow position: chr3:80581355-80581603 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 103, 31

Conread position: 1-262
Cow position: chr3:15662018-15661756 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 65, 28

Conread position: 1-263
Cow position: chr3:26903797-26904055 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 104, 30

Conread position: 1-263
Cow position: chr3:71231086-71231343 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 133

Conread position: 1-263
Cow position: chr3:80053854-80053594 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 32

Conread position: 1-264
Cow position: chr3:45312732-45312995 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 68

Conread position: 1-264
Cow position: chr3:68586721-68586966 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 195, 29

Conread position: 1-269
Cow position: chr3:27544654-27544382 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 19, 143

Conread position: 1-270
Cow position: chr3:12712243-12711966 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 35, 30

Conread position: 1-277
Cow position: chr3:8716927-8717208 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 35

Conread position: 1-288
Cow position: chr3:57754800-57754506 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 58

Conread position: 1-299
Cow position: chr3:15052259-15051974 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 79

Conread position: 1-299
Cow position: chr3:26920575-26920883 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 22, 78

Conread position: 1-301
Cow position: chr3:2674709-2675011 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 41

Conread position: 1-305
Cow position: chr3:2024864-2025176 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 32

Conread position: 1-309
Cow position: chr3:14626470-14626172 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 33, 67

Conread position: 3-304
Cow position: chr3:75479699-75479988 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 27

Conread position: 4-230
Cow position: chr3:48530321-48530556 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 42

Conread position: 4-238
Cow position: chr3:55117286-55117048 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 19, 28

Conread position: 4-238
Cow position: chr3:57479646-57479408 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 80

Conread position: 4-238
Cow position: chr3:79220532-79220771 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 4-239
Cow position: chr3:79592205-79591964 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 27

Conread position: 4-244
Cow position: chr3:61857179-61857425 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 30, 235

Conread position: 4-255
Cow position: chr3:49218624-49218377 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 29

Conread position: 4-257
Cow position: chr3:2483139-2483385 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 107, 26

Conread position: 4-257
Cow position: chr3:22872369-22872108 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 29

Conread position: 4-257
Cow position: chr3:31419379-31419641 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 143

Conread position: 4-262
Cow position: chr3:2506796-2506532 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 28, 53

Conread position: 4-262
Cow position: chr3:48252580-48252826 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 29

Conread position: 4-263
Cow position: chr3:3164810-3164550 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 28

Conread position: 4-269
Cow position: chr3:59514797-59515054 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 99, 36

Conread position: 4-269
Cow position: chr3:61361100-61361355 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 192, 26

Conread position: 4-273
Cow position: chr3:7678359-7678623 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 99, 26

Conread position: 4-274
Cow position: chr3:59001062-59000797 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 65

Conread position: 4-275
Cow position: chr3:3032084-3032362 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 115, 26

Conread position: 4-279
Cow position: chr3:31298474-31298187 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 99, 36

Conread position: 4-283
Cow position: chr3:2007957-2008225 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 29

Conread position: 4-288
Cow position: chr3:75727906-75727613 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 197

Conread position: 4-293
Cow position: chr3:53112851-53113151 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 29

Conread position: 4-297
Cow position: chr3:72018806-72019091 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 37

Conread position: 4-305
Cow position: chr3:30179767-30180066 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 27

Conread position: 4-307
Cow position: chr3:15954394-15954103 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 32

Conread position: 4-307
Cow position: chr3:33698408-33698713 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 17

Conread position: 4-307
Cow position: chr3:49461254-49460944 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 19, 39

Conread position: 4-307
Cow position: chr3:53384600-53384298 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 29

Conread position: 4-307
Cow position: chr3:53593016-53592707 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 71

Conread position: 4-316
Cow position: chr3:18066817-18067131 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 188

Conread position: 5-230
Cow position: chr3:70566054-70565829 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 29, 183

Conread position: 5-236
Cow position: chr3:45523949-45524181 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 42

Conread position: 5-257
Cow position: chr3:31047258-31047012 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 18, 28

Conread position: 5-276
Cow position: chr3:34270618-34270873 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 149, 35

Conread position: 5-306
Cow position: chr3:42423647-42423345 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 131

Conread position: 6-257
Cow position: chr3:59271244-59271479 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 61

Conread position: 9-308
Cow position: chr3:59267773-59268072 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 30

Conread position: 11-299
Cow position: chr3:65800285-65800566 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 51

Conread position: 13-238
Cow position: chr3:62826928-62826702 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 90, 17

Conread position: 14-238
Cow position: chr3:6689687-6689918 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 16

Conread position: 18-217
Cow position: chr3:24639290-24639489 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 85, 23

Conread position: 18-225
Cow position: chr3:2216060-2216269 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 86, 12

Conread position: 18-225
Cow position: chr3:18763594-18763802 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 25

Conread position: 18-225
Cow position: chr3:38346903-38347107 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 85, 9

Conread position: 18-238
Cow position: chr3:20129641-20129862 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 44, 12

Conread position: 18-247
Cow position: chr3:27285925-27286158 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 86, 12

Conread position: 18-252
Cow position: chr3:61171802-61171572 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 22

Conread position: 18-255
Cow position: chr3:82460883-82461115 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 12

Conread position: 18-256
Cow position: chr3:72390783-72391023 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 85, 40

Conread position: 18-262
Cow position: chr3:46350352-46350614 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 68

Conread position: 18-263
Cow position: chr3:46900895-46901143 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 88, 25

Conread position: 18-264
Cow position: chr3:44535060-44534814 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 12

Conread position: 18-266
Cow position: chr3:66610138-66609895 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 178, 22

Conread position: 18-289
Cow position: chr3:17952356-17952630 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 22

Conread position: 18-298
Cow position: chr3:65968855-65969140 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 12

Conread position: 18-305
Cow position: chr3:2903598-2903313 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 29, 21

Conread position: 26-238
Cow position: chr3:18854799-18855012 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 100

Conread position: 30-224
Cow position: chr3:66375031-66375219 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 83, 76

Conread position: 31-266
Cow position: chr3:48296422-48296657 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 72, 38

Conread position: 33-238
Cow position: chr3:56704824-56704627 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 70, 86

Conread position: 33-238
Cow position: chr3:79148563-79148352 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 33-249
Cow position: chr3:19198394-19198601 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 70, 155

Conread position: 33-262
Cow position: chr3:25691462-25691698 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 70, 129

Conread position: 34-238
Cow position: chr3:33253164-33252960 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 69, 24

Conread position: 35-269
Cow position: chr3:38691689-38691456 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 68, 5

Conread position: 36-238
Cow position: chr3:364503-364295 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 67, 0

Conread position: 36-256
Cow position: chr3:56653-56439 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 30

Conread position: 36-274
Cow position: chr3:65413559-65413324 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 67, 32

Conread position: 36-293
Cow position: chr3:52863467-52863209 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 32

Conread position: 36-299
Cow position: chr3:5096919-5097181 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 105

Conread position: 36-302
Cow position: chr3:63179584-63179840 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 67, 109

Conread position: 38-276
Cow position: chr3:39171766-39171525 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 67, 150

Conread position: 39-278
Cow position: chr3:77365575-77365336 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 204, 70

Conread position: 40-237
Cow position: chr3:34392376-34392181 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 31

Conread position: 40-256
Cow position: chr3:57763943-57764165 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 63, 151

Conread position: 40-296
Cow position: chr3:63861181-63860918 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 63, 200

Conread position: 40-299
Cow position: chr3:53046937-53046685 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 73, 115

Conread position: 40-313
Cow position: chr3:10347074-10347341 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 148

Conread position: 41-264
Cow position: chr3:49731916-49731695 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 62, 27

Conread position: 41-281
Cow position: chr3:42588070-42588316 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 62, 222

Conread position: 44-299
Cow position: chr3:74499948-74500217 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 59, 243

Conread position: 46-212
Cow position: chr3:84368643-84368481 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 22

Conread position: 46-237
Cow position: chr3:30055720-30055530 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 92

Conread position: 50-252
Cow position: chr3:13302126-13301914 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 103

Conread position: 50-267
Cow position: chr3:51578591-51578372 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 140

Conread position: 58-263
Cow position: chr3:73394854-73395067 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 134

Conread position: 58-267
Cow position: chr3:28692691-28692483 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 10

Conread position: 62-256
Cow position: chr3:71237899-71238094 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 36

Conread position: 62-257
Cow position: chr3:8604272-8604075 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 128

Conread position: 62-264
Cow position: chr3:4087424-4087218 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 87

Conread position: 62-299
Cow position: chr3:8060874-8061103 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 66

Conread position: 63-299
Cow position: chr3:56476425-56476656 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 40, 82

Conread position: 63-304
Cow position: chr3:22820312-22820551 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 48, 65

Conread position: 64-238
Cow position: chr3:23269846-23270015 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 39, 65

Conread position: 66-299
Cow position: chr3:11711699-11711939 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 208

Conread position: 67-256
Cow position: chr3:5045063-5044865 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 67-257
Cow position: chr3:48578588-48578770 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 129, 43

Conread position: 67-272
Cow position: chr3:41328202-41328400 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 57

Conread position: 67-274
Cow position: chr3:26970572-26970785 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 125

Conread position: 72-308
Cow position: chr3:55947327-55947567 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 190

Conread position: 72-313
Cow position: chr3:44932260-44932503 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 32, 120

Conread position: 74-297
Cow position: chr3:55836075-55835849 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 120

Conread position: 76-238
Cow position: chr3:35074437-35074600 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 39

Conread position: 81-263
Cow position: chr3:83201767-83201581 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 113

Conread position: 81-283
Cow position: chr3:39661689-39661492 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 59

Conread position: 87-287
Cow position: chr3:17447841-17447642 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 80

Conread position: 92-287
Cow position: chr3:15192336-15192532 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 174

Conread position: 98-262
Cow position: chr3:74878810-74878645 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 7

Conread position: 101-307
Cow position: chr3:25944859-25945075 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 103-281
Cow position: chr3:55712209-55712392 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 95

Conread position: 110-274
Cow position: chr3:76713531-76713368 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 34

Conread position: 115-307
Cow position: chr3:59885180-59885375 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 160

Conread position: 125-238
Cow position: chr3:21693751-21693865 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 125-299
Cow position: chr3:70631824-70631992 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 144-279
Cow position: chr3:55819572-55819713 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.