Cow genome map
| Conread name: | rnmm33c_a1.y1 |
| Conread position: | 1-217 |
| Cow position: | chr3:79905232-79905022 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 1-238 |
| Cow position: | chr3:8147982-8147751 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 1-238 |
| Cow position: | chr3:11640118-11640350 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 1-238 |
| Cow position: | chr3:12323748-12323991 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 1-238 |
| Cow position: | chr3:26554034-26553797 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 55 |
| Conread position: | 1-238 |
| Cow position: | chr3:31206552-31206792 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-238 |
| Cow position: | chr3:67929586-67929344 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 1-238 |
| Cow position: | chr3:79884806-79884565 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-245 |
| Cow position: | chr3:55085510-55085254 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 24, 252 |
| Conread position: | 1-246 |
| Cow position: | chr3:18393704-18393464 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 1-256 |
| Cow position: | chr3:72675767-72676030 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 1-257 |
| Cow position: | chr3:61678371-61678633 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-257 |
| Cow position: | chr3:80581355-80581603 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 1-262 |
| Cow position: | chr3:15662018-15661756 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 1-263 |
| Cow position: | chr3:26903797-26904055 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 104, 30 |
| Conread position: | 1-263 |
| Cow position: | chr3:71231086-71231343 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 133 |
| Conread position: | 1-263 |
| Cow position: | chr3:80053854-80053594 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-264 |
| Cow position: | chr3:45312732-45312995 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 1-264 |
| Cow position: | chr3:68586721-68586966 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 195, 29 |
| Conread position: | 1-269 |
| Cow position: | chr3:27544654-27544382 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 1-270 |
| Cow position: | chr3:12712243-12711966 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 1-277 |
| Cow position: | chr3:8716927-8717208 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 1-288 |
| Cow position: | chr3:57754800-57754506 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 1-299 |
| Cow position: | chr3:15052259-15051974 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 1-299 |
| Cow position: | chr3:26920575-26920883 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 1-301 |
| Cow position: | chr3:2674709-2675011 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 1-305 |
| Cow position: | chr3:2024864-2025176 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 1-309 |
| Cow position: | chr3:14626470-14626172 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 3-304 |
| Cow position: | chr3:75479699-75479988 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 110, 27 |
| Conread position: | 4-230 |
| Cow position: | chr3:48530321-48530556 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 4-238 |
| Cow position: | chr3:55117286-55117048 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 4-238 |
| Cow position: | chr3:57479646-57479408 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 80 |
| Conread position: | 4-238 |
| Cow position: | chr3:79220532-79220771 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 4-239 |
| Cow position: | chr3:79592205-79591964 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 4-244 |
| Cow position: | chr3:61857179-61857425 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 30, 235 |
| Conread position: | 4-255 |
| Cow position: | chr3:49218624-49218377 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 4-257 |
| Cow position: | chr3:2483139-2483385 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 4-257 |
| Cow position: | chr3:22872369-22872108 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 4-257 |
| Cow position: | chr3:31419379-31419641 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 4-262 |
| Cow position: | chr3:2506796-2506532 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 4-262 |
| Cow position: | chr3:48252580-48252826 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 4-263 |
| Cow position: | chr3:3164810-3164550 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 99, 28 |
| Conread position: | 4-269 |
| Cow position: | chr3:59514797-59515054 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 4-269 |
| Cow position: | chr3:61361100-61361355 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 192, 26 |
| Conread position: | 4-273 |
| Cow position: | chr3:7678359-7678623 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 4-274 |
| Cow position: | chr3:59001062-59000797 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 4-275 |
| Cow position: | chr3:3032084-3032362 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 115, 26 |
| Conread position: | 4-279 |
| Cow position: | chr3:31298474-31298187 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 4-283 |
| Cow position: | chr3:2007957-2008225 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 4-288 |
| Cow position: | chr3:75727906-75727613 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 197 |
| Conread position: | 4-293 |
| Cow position: | chr3:53112851-53113151 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 4-297 |
| Cow position: | chr3:72018806-72019091 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 4-305 |
| Cow position: | chr3:30179767-30180066 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 62, 27 |
| Conread position: | 4-307 |
| Cow position: | chr3:15954394-15954103 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 4-307 |
| Cow position: | chr3:33698408-33698713 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 17 |
| Conread position: | 4-307 |
| Cow position: | chr3:49461254-49460944 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 4-307 |
| Cow position: | chr3:53384600-53384298 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 4-307 |
| Cow position: | chr3:53593016-53592707 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 71 |
| Conread position: | 4-316 |
| Cow position: | chr3:18066817-18067131 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 188 |
| Conread position: | 5-230 |
| Cow position: | chr3:70566054-70565829 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 29, 183 |
| Conread position: | 5-236 |
| Cow position: | chr3:45523949-45524181 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 5-257 |
| Cow position: | chr3:31047258-31047012 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 5-276 |
| Cow position: | chr3:34270618-34270873 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 149, 35 |
| Conread position: | 5-306 |
| Cow position: | chr3:42423647-42423345 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 29, 131 |
| Conread position: | 6-257 |
| Cow position: | chr3:59271244-59271479 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 9-308 |
| Cow position: | chr3:59267773-59268072 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 11-299 |
| Cow position: | chr3:65800285-65800566 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 13-238 |
| Cow position: | chr3:62826928-62826702 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 14-238 |
| Cow position: | chr3:6689687-6689918 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 18-217 |
| Cow position: | chr3:24639290-24639489 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 18-225 |
| Cow position: | chr3:2216060-2216269 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 18-225 |
| Cow position: | chr3:18763594-18763802 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 18-225 |
| Cow position: | chr3:38346903-38347107 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 85, 9 |
| Conread position: | 18-238 |
| Cow position: | chr3:20129641-20129862 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 18-247 |
| Cow position: | chr3:27285925-27286158 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 18-252 |
| Cow position: | chr3:61171802-61171572 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 18-255 |
| Cow position: | chr3:82460883-82461115 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 18-256 |
| Cow position: | chr3:72390783-72391023 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 18-262 |
| Cow position: | chr3:46350352-46350614 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 18-263 |
| Cow position: | chr3:46900895-46901143 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 18-264 |
| Cow position: | chr3:44535060-44534814 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 18-266 |
| Cow position: | chr3:66610138-66609895 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 178, 22 |
| Conread position: | 18-289 |
| Cow position: | chr3:17952356-17952630 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 18-298 |
| Cow position: | chr3:65968855-65969140 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 12 |
| Conread position: | 18-305 |
| Cow position: | chr3:2903598-2903313 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 26-238 |
| Cow position: | chr3:18854799-18855012 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 100 |
| Conread position: | 30-224 |
| Cow position: | chr3:66375031-66375219 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 83, 76 |
| Conread position: | 31-266 |
| Cow position: | chr3:48296422-48296657 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 33-238 |
| Cow position: | chr3:56704824-56704627 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 70, 86 |
| Conread position: | 33-238 |
| Cow position: | chr3:79148563-79148352 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 33-249 |
| Cow position: | chr3:19198394-19198601 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 70, 155 |
| Conread position: | 33-262 |
| Cow position: | chr3:25691462-25691698 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 70, 129 |
| Conread position: | 34-238 |
| Cow position: | chr3:33253164-33252960 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 35-269 |
| Cow position: | chr3:38691689-38691456 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 68, 5 |
| Conread position: | 36-238 |
| Cow position: | chr3:364503-364295 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 36-256 |
| Cow position: | chr3:56653-56439 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 36-274 |
| Cow position: | chr3:65413559-65413324 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 36-293 |
| Cow position: | chr3:52863467-52863209 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 36-299 |
| Cow position: | chr3:5096919-5097181 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 105 |
| Conread position: | 36-302 |
| Cow position: | chr3:63179584-63179840 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 67, 109 |
| Conread position: | 38-276 |
| Cow position: | chr3:39171766-39171525 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 67, 150 |
| Conread position: | 39-278 |
| Cow position: | chr3:77365575-77365336 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 204, 70 |
| Conread position: | 40-237 |
| Cow position: | chr3:34392376-34392181 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 40-256 |
| Cow position: | chr3:57763943-57764165 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 63, 151 |
| Conread position: | 40-296 |
| Cow position: | chr3:63861181-63860918 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 63, 200 |
| Conread position: | 40-299 |
| Cow position: | chr3:53046937-53046685 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 73, 115 |
| Conread position: | 40-313 |
| Cow position: | chr3:10347074-10347341 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 148 |
| Conread position: | 41-264 |
| Cow position: | chr3:49731916-49731695 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 62, 27 |
| Conread position: | 41-281 |
| Cow position: | chr3:42588070-42588316 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 62, 222 |
| Conread position: | 44-299 |
| Cow position: | chr3:74499948-74500217 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 59, 243 |
| Conread position: | 46-212 |
| Cow position: | chr3:84368643-84368481 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 46-237 |
| Cow position: | chr3:30055720-30055530 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 50-252 |
| Cow position: | chr3:13302126-13301914 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 103 |
| Conread position: | 50-267 |
| Cow position: | chr3:51578591-51578372 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 58-263 |
| Cow position: | chr3:73394854-73395067 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 134 |
| Conread position: | 58-267 |
| Cow position: | chr3:28692691-28692483 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 62-256 |
| Cow position: | chr3:71237899-71238094 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 36 |
| Conread position: | 62-257 |
| Cow position: | chr3:8604272-8604075 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 128 |
| Conread position: | 62-264 |
| Cow position: | chr3:4087424-4087218 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 87 |
| Conread position: | 62-299 |
| Cow position: | chr3:8060874-8061103 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 63-299 |
| Cow position: | chr3:56476425-56476656 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 63-304 |
| Cow position: | chr3:22820312-22820551 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 64-238 |
| Cow position: | chr3:23269846-23270015 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 66-299 |
| Cow position: | chr3:11711699-11711939 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 208 |
| Conread position: | 67-256 |
| Cow position: | chr3:5045063-5044865 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 67-257 |
| Cow position: | chr3:48578588-48578770 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 129, 43 |
| Conread position: | 67-272 |
| Cow position: | chr3:41328202-41328400 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 67-274 |
| Cow position: | chr3:26970572-26970785 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 37, 125 |
| Conread position: | 72-308 |
| Cow position: | chr3:55947327-55947567 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 190 |
| Conread position: | 72-313 |
| Cow position: | chr3:44932260-44932503 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 74-297 |
| Cow position: | chr3:55836075-55835849 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 76-238 |
| Cow position: | chr3:35074437-35074600 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 81-263 |
| Cow position: | chr3:83201767-83201581 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 113 |
| Conread position: | 81-283 |
| Cow position: | chr3:39661689-39661492 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 87-287 |
| Cow position: | chr3:17447841-17447642 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 92-287 |
| Cow position: | chr3:15192336-15192532 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 174 |
| Conread position: | 98-262 |
| Cow position: | chr3:74878810-74878645 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 98, 7 |
| Conread position: | 101-307 |
| Cow position: | chr3:25944859-25945075 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 103-281 |
| Cow position: | chr3:55712209-55712392 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 27, 95 |
| Conread position: | 110-274 |
| Cow position: | chr3:76713531-76713368 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 115-307 |
| Cow position: | chr3:59885180-59885375 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 160 |
| Conread position: | 125-238 |
| Cow position: | chr3:21693751-21693865 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 125-299 |
| Cow position: | chr3:70631824-70631992 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 144-279 |
| Cow position: | chr3:55819572-55819713 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.