Cow genome map

Conread name: rnmm33c_a1.y1

Conread position: 1-230
Cow position: chr4:20328016-20327786 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 107, 38

Conread position: 1-237
Cow position: chr4:42232364-42232590 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 61

Conread position: 1-238
Cow position: chr4:7249873-7249636 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 32

Conread position: 1-238
Cow position: chr4:9136973-9137211 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 32, 68

Conread position: 1-247
Cow position: chr4:33421665-33421417 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 39, 30

Conread position: 1-253
Cow position: chr4:67444841-67445098 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 24, 40

Conread position: 1-255
Cow position: chr4:68764213-68764474 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 35

Conread position: 1-256
Cow position: chr4:12003919-12004179 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 1-257
Cow position: chr4:46526695-46526952 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 32

Conread position: 1-257
Cow position: chr4:49794377-49794622 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 24, 42

Conread position: 1-263
Cow position: chr4:28399708-28399459 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 102, 31

Conread position: 1-267
Cow position: chr4:12591515-12591249 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 1-274
Cow position: chr4:24119215-24118936 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 32

Conread position: 1-274
Cow position: chr4:38799496-38799229 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 39, 27

Conread position: 1-276
Cow position: chr4:45589891-45589629 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 70

Conread position: 1-279
Cow position: chr4:43370154-43369875 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 32

Conread position: 1-280
Cow position: chr4:39009665-39009944 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 52, 30

Conread position: 1-298
Cow position: chr4:7964952-7964658 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 102, 29

Conread position: 1-299
Cow position: chr4:48137610-48137903 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 54

Conread position: 1-307
Cow position: chr4:11201516-11201819 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 29

Conread position: 1-307
Cow position: chr4:15635747-15635449 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 32

Conread position: 1-307
Cow position: chr4:15904797-15905099 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 29

Conread position: 1-307
Cow position: chr4:42672867-42673175 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 35

Conread position: 2-131
Cow position: chr4:41186668-41186539 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 35

Conread position: 3-238
Cow position: chr4:62772237-62771992 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 200

Conread position: 4-238
Cow position: chr4:19237941-19238170 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 26

Conread position: 4-238
Cow position: chr4:26163274-26163040 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 21, 138

Conread position: 4-257
Cow position: chr4:10731918-10732178 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 29

Conread position: 4-257
Cow position: chr4:26400656-26400917 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 65

Conread position: 4-257
Cow position: chr4:53208938-53209192 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 36, 29

Conread position: 4-257
Cow position: chr4:63365675-63365421 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 126, 26

Conread position: 4-263
Cow position: chr4:49159074-49158829 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 99, 26

Conread position: 4-267
Cow position: chr4:16736205-16736467 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 26

Conread position: 4-267
Cow position: chr4:27276844-27276580 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 19, 148

Conread position: 4-268
Cow position: chr4:37620188-37619920 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 50

Conread position: 4-275
Cow position: chr4:60897574-60897303 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 19, 39

Conread position: 4-298
Cow position: chr4:30574155-30574446 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 19, 29

Conread position: 4-299
Cow position: chr4:34166266-34165980 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 19

Conread position: 4-307
Cow position: chr4:28836231-28836535 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 49

Conread position: 5-180
Cow position: chr4:61999752-61999576 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 28

Conread position: 5-238
Cow position: chr4:26323442-26323670 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 25

Conread position: 6-238
Cow position: chr4:68076827-68076596 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 27

Conread position: 6-264
Cow position: chr4:53208005-53208253 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 190, 24

Conread position: 6-310
Cow position: chr4:18974141-18974431 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 105, 34

Conread position: 7-238
Cow position: chr4:18095971-18095737 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 104, 23

Conread position: 9-257
Cow position: chr4:10026195-10026436 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 21

Conread position: 9-269
Cow position: chr4:11671157-11671421 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 182

Conread position: 12-238
Cow position: chr4:5610362-5610138 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 19

Conread position: 12-239
Cow position: chr4:42267032-42266818 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 18

Conread position: 13-299
Cow position: chr4:36893064-36893350 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 90, 17

Conread position: 18-262
Cow position: chr4:19561411-19561644 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 176, 22

Conread position: 18-263
Cow position: chr4:57555682-57555932 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 86, 12

Conread position: 18-268
Cow position: chr4:45662784-45662543 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 86, 12

Conread position: 18-306
Cow position: chr4:19584420-19584720 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 85, 12

Conread position: 28-269
Cow position: chr4:29291248-29291485 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 15

Conread position: 31-263
Cow position: chr4:41301264-41301028 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 72, 163

Conread position: 31-299
Cow position: chr4:23509316-23509587 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 72, 16

Conread position: 31-313
Cow position: chr4:20298996-20299279 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 37, 148

Conread position: 33-257
Cow position: chr4:17474166-17474395 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 33

Conread position: 33-299
Cow position: chr4:27529842-27530109 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 70, 161

Conread position: 33-307
Cow position: chr4:5461124-5460862 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 29, 47

Conread position: 34-274
Cow position: chr4:8801233-8801479 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 108

Conread position: 36-256
Cow position: chr4:51739971-51739755 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 75, 102

Conread position: 36-257
Cow position: chr4:46597115-46597333 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 67, 32

Conread position: 36-263
Cow position: chr4:54930684-54930459 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 57

Conread position: 36-266
Cow position: chr4:67392702-67392923 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 67, 32

Conread position: 37-257
Cow position: chr4:4321273-4321045 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 157

Conread position: 37-275
Cow position: chr4:34630635-34630863 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 66, 31

Conread position: 37-308
Cow position: chr4:17660472-17660187 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 74, 250

Conread position: 38-255
Cow position: chr4:25359339-25359563 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 58

Conread position: 38-257
Cow position: chr4:54667957-54667733 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 74, 153

Conread position: 39-307
Cow position: chr4:26746219-26746482 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 114

Conread position: 40-238
Cow position: chr4:31348458-31348256 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 63, 142

Conread position: 40-299
Cow position: chr4:55395504-55395754 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 156, 61

Conread position: 40-305
Cow position: chr4:10968649-10968390 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 63, 115

Conread position: 40-310
Cow position: chr4:1237380-1237112 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 63, 45

Conread position: 41-300
Cow position: chr4:23445314-23445053 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 30

Conread position: 42-284
Cow position: chr4:26307762-26307522 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 78

Conread position: 42-307
Cow position: chr4:43909490-43909744 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 154, 64

Conread position: 43-269
Cow position: chr4:51866733-51866960 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 120

Conread position: 45-262
Cow position: chr4:13255836-13256048 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 24

Conread position: 45-302
Cow position: chr4:35940270-35940007 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 58, 23

Conread position: 46-238
Cow position: chr4:27664747-27664945 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 47-276
Cow position: chr4:11897556-11897323 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 56, 122

Conread position: 48-263
Cow position: chr4:19322335-19322119 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 56, 90

Conread position: 48-299
Cow position: chr4:20157669-20157421 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 81

Conread position: 49-263
Cow position: chr4:12676558-12676766 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 19

Conread position: 49-299
Cow position: chr4:49089539-49089782 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 54, 103

Conread position: 50-282
Cow position: chr4:52167097-52166881 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 54-238
Cow position: chr4:11004965-11004787 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 14

Conread position: 58-257
Cow position: chr4:65891745-65891947 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 46

Conread position: 59-224
Cow position: chr4:26659060-26659223 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 137, 127

Conread position: 59-281
Cow position: chr4:46370565-46370794 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 139

Conread position: 61-229
Cow position: chr4:28173043-28172876 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 97

Conread position: 61-305
Cow position: chr4:14919756-14919997 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 42, 62

Conread position: 67-238
Cow position: chr4:23911826-23911650 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 31

Conread position: 67-257
Cow position: chr4:6653498-6653679 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 35

Conread position: 70-299
Cow position: chr4:2601995-2602226 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 120

Conread position: 81-276
Cow position: chr4:27687700-27687898 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 97

Conread position: 85-263
Cow position: chr4:36724823-36724999 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 53

Conread position: 87-264
Cow position: chr4:43515508-43515688 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 15

Conread position: 90-263
Cow position: chr4:13974186-13974009 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 101

Conread position: 120-306
Cow position: chr4:29106721-29106905 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 7

Conread position: 142-307
Cow position: chr4:28068504-28068340 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 45

Show alignments to all cow chromosomes.