Cow genome map
| Conread name: | rnmm33c_a1.y1 |
| Conread position: | 1-193 |
| Cow position: | chr5:57787109-57787296 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 1-233 |
| Cow position: | chr5:15462454-15462676 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 102, 29 |
| Conread position: | 1-235 |
| Cow position: | chr5:4507232-4506991 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 42, 30 |
| Conread position: | 1-238 |
| Cow position: | chr5:5938053-5938291 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 1-238 |
| Cow position: | chr5:47601540-47601785 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 1-255 |
| Cow position: | chr5:53855433-53855684 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 1-256 |
| Cow position: | chr5:4551861-4552133 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 1-257 |
| Cow position: | chr5:31469854-31469594 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 1-257 |
| Cow position: | chr5:35145079-35145337 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 140 |
| Conread position: | 1-257 |
| Cow position: | chr5:72564487-72564750 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 1-262 |
| Cow position: | chr5:55176621-55176883 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 1-263 |
| Cow position: | chr5:57327517-57327791 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 36, 196 |
| Conread position: | 1-263 |
| Cow position: | chr5:65933199-65932934 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-270 |
| Cow position: | chr5:3204567-3204835 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 190, 39 |
| Conread position: | 1-293 |
| Cow position: | chr5:41531358-41531058 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 1-295 |
| Cow position: | chr5:26990122-26990416 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 33, 152 |
| Conread position: | 1-299 |
| Cow position: | chr5:16206413-16206129 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 4-215 |
| Cow position: | chr5:35123812-35123592 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 4-229 |
| Cow position: | chr5:65601195-65601420 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 26 |
| Conread position: | 4-232 |
| Cow position: | chr5:33414673-33414449 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 4-232 |
| Cow position: | chr5:56443013-56443246 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 4-238 |
| Cow position: | chr5:14550854-14550615 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 4-238 |
| Cow position: | chr5:21944113-21944363 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 4-238 |
| Cow position: | chr5:28330597-28330367 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 4-238 |
| Cow position: | chr5:39094285-39094521 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 117 |
| Conread position: | 4-238 |
| Cow position: | chr5:46104208-46103974 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 158 |
| Conread position: | 4-238 |
| Cow position: | chr5:63917675-63917444 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 4-255 |
| Cow position: | chr5:26377932-26377684 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 4-257 |
| Cow position: | chr5:17999764-17999504 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 4-257 |
| Cow position: | chr5:42063935-42064191 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 4-268 |
| Cow position: | chr5:65887282-65887008 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 4-269 |
| Cow position: | chr5:34528296-34528553 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 4-269 |
| Cow position: | chr5:54405162-54404891 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 4-289 |
| Cow position: | chr5:5111345-5111056 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 4-299 |
| Cow position: | chr5:30486983-30487266 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 192, 26 |
| Conread position: | 4-299 |
| Cow position: | chr5:63987715-63987421 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 4-301 |
| Cow position: | chr5:57935381-57935076 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 97, 180 |
| Conread position: | 4-307 |
| Cow position: | chr5:16508828-16509132 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 4-307 |
| Cow position: | chr5:63964449-63964137 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 251 |
| Conread position: | 5-238 |
| Cow position: | chr5:21524897-21525137 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 5-238 |
| Cow position: | chr5:47313206-47313442 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 30, 129 |
| Conread position: | 5-238 |
| Cow position: | chr5:70102072-70101841 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 5-282 |
| Cow position: | chr5:45226096-45225810 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 189 |
| Conread position: | 5-298 |
| Cow position: | chr5:37190360-37190074 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 5-313 |
| Cow position: | chr5:27015425-27015717 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 5-323 |
| Cow position: | chr5:28927864-28927541 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 18, 191 |
| Conread position: | 7-263 |
| Cow position: | chr5:44583383-44583134 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 13-254 |
| Cow position: | chr5:56467445-56467685 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 14-274 |
| Cow position: | chr5:52165437-52165173 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 17-269 |
| Cow position: | chr5:59326080-59325836 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 94, 23 |
| Conread position: | 18-232 |
| Cow position: | chr5:23140829-23140615 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 123 |
| Conread position: | 18-257 |
| Cow position: | chr5:61839937-61840180 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 18-257 |
| Cow position: | chr5:67932714-67932479 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 18-274 |
| Cow position: | chr5:28224204-28224457 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 12 |
| Conread position: | 18-275 |
| Cow position: | chr5:55756693-55756419 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 18-280 |
| Cow position: | chr5:47871301-47871035 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 18-289 |
| Cow position: | chr5:50599815-50600075 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 120, 20 |
| Conread position: | 18-299 |
| Cow position: | chr5:6130105-6130378 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 20-257 |
| Cow position: | chr5:3491952-3492183 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 21-263 |
| Cow position: | chr5:56433550-56433798 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 27-268 |
| Cow position: | chr5:54064535-54064777 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 84, 114 |
| Conread position: | 29-259 |
| Cow position: | chr5:36854970-36855195 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 80, 75 |
| Conread position: | 31-263 |
| Cow position: | chr5:49685523-49685276 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 140 |
| Conread position: | 32-256 |
| Cow position: | chr5:35208022-35208251 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 79, 158 |
| Conread position: | 32-257 |
| Cow position: | chr5:60519927-60520150 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 71, 94 |
| Conread position: | 33-238 |
| Cow position: | chr5:46323050-46322844 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 71, 139 |
| Conread position: | 33-257 |
| Cow position: | chr5:58144844-58144613 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 33-268 |
| Cow position: | chr5:58855866-58856103 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 33-274 |
| Cow position: | chr5:51999981-52000227 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 33-279 |
| Cow position: | chr5:6575821-6575581 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 33-280 |
| Cow position: | chr5:2500419-2500174 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 33-299 |
| Cow position: | chr5:34115424-34115677 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 70, 95 |
| Conread position: | 34-251 |
| Cow position: | chr5:58229466-58229687 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 98 |
| Conread position: | 34-257 |
| Cow position: | chr5:4032226-4032004 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 34-310 |
| Cow position: | chr5:41392508-41392777 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 103, 66 |
| Conread position: | 35-257 |
| Cow position: | chr5:34885392-34885172 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 69, 155 |
| Conread position: | 35-268 |
| Cow position: | chr5:65776622-65776385 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 68, 155 |
| Conread position: | 36-227 |
| Cow position: | chr5:2851079-2851273 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 70, 32 |
| Conread position: | 36-238 |
| Cow position: | chr5:37814388-37814588 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 75, 90 |
| Conread position: | 36-269 |
| Cow position: | chr5:42744562-42744785 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 36-274 |
| Cow position: | chr5:54311098-54311340 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 36-286 |
| Cow position: | chr5:45036785-45037039 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 36-299 |
| Cow position: | chr5:34300690-34300943 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 81 |
| Conread position: | 36-317 |
| Cow position: | chr5:17063329-17063038 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 67, 155 |
| Conread position: | 37-276 |
| Cow position: | chr5:43992091-43992329 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 117, 61 |
| Conread position: | 38-262 |
| Cow position: | chr5:28324112-28324348 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 65, 161 |
| Conread position: | 38-274 |
| Cow position: | chr5:42777531-42777769 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 66, 114 |
| Conread position: | 38-299 |
| Cow position: | chr5:41164855-41165112 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 113 |
| Conread position: | 38-306 |
| Cow position: | chr5:56135202-56134933 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 65, 152 |
| Conread position: | 39-299 |
| Cow position: | chr5:21964059-21964313 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 40-236 |
| Cow position: | chr5:16938239-16938043 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 63, 79 |
| Conread position: | 40-257 |
| Cow position: | chr5:7723441-7723653 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 40-263 |
| Cow position: | chr5:12709655-12709882 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 40-307 |
| Cow position: | chr5:64137020-64137288 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 74, 226 |
| Conread position: | 42-238 |
| Cow position: | chr5:46122578-46122384 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 42-297 |
| Cow position: | chr5:56070624-56070881 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 43-299 |
| Cow position: | chr5:21828636-21828892 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 61, 149 |
| Conread position: | 44-304 |
| Cow position: | chr5:56820487-56820231 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 152, 58 |
| Conread position: | 46-282 |
| Cow position: | chr5:5257522-5257286 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 57, 136 |
| Conread position: | 47-229 |
| Cow position: | chr5:14415549-14415736 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 51-257 |
| Cow position: | chr5:2309785-2309569 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 56-262 |
| Cow position: | chr5:35235924-35235715 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 47, 138 |
| Conread position: | 57-263 |
| Cow position: | chr5:7140319-7140114 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 57-299 |
| Cow position: | chr5:8024406-8024169 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 58-256 |
| Cow position: | chr5:35969329-35969522 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 59-257 |
| Cow position: | chr5:57271478-57271277 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 61-262 |
| Cow position: | chr5:40039981-40039777 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 91 |
| Conread position: | 61-262 |
| Cow position: | chr5:71494606-71494812 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 169 |
| Conread position: | 62-266 |
| Cow position: | chr5:29212739-29212940 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 70 |
| Conread position: | 64-307 |
| Cow position: | chr5:44049495-44049734 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 66-238 |
| Cow position: | chr5:50870333-50870512 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 133 |
| Conread position: | 71-257 |
| Cow position: | chr5:56518410-56518222 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 43, 119 |
| Conread position: | 73-238 |
| Cow position: | chr5:57575567-57575735 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 78-257 |
| Cow position: | chr5:50215752-50215567 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 103 |
| Conread position: | 82-238 |
| Cow position: | chr5:52040509-52040349 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 87-311 |
| Cow position: | chr5:1678215-1678429 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 88-280 |
| Cow position: | chr5:37808848-37808660 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 107-268 |
| Cow position: | chr5:71579010-71579174 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 111-349 |
| Cow position: | chr5:41486896-41486659 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 26 |
| Conread position: | 120-278 |
| Cow position: | chr5:43816757-43816601 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 123, 5 |
| Conread position: | 125-296 |
| Cow position: | chr5:50972385-50972551 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 137-307 |
| Cow position: | chr5:14473548-14473372 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 155-263 |
| Cow position: | chr5:13717686-13717573 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.