Cow genome map

Conread name: rnmm33c_a1.y1

Conread position: 1-215
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 32

Conread position: 1-223
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 33, 54

Conread position: 1-224
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 198

Conread position: 1-229
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 1-232
Cow position:
Alignm length: 236
Alignm identity: 175
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 42, 30

Conread position: 1-238
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 32

Conread position: 1-238
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 103, 30

Conread position: 1-239
Cow position:
Alignm length: 248
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 42

Conread position: 1-245
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 67

Conread position: 1-257
Cow position:
Alignm length: 269
Alignm identity: 200
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 22, 41

Conread position: 1-257
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 152

Conread position: 1-263
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 70

Conread position: 1-267
Cow position:
Alignm length: 274
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 9

Conread position: 1-269
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 31, 58

Conread position: 1-273
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 22, 32

Conread position: 1-277
Cow position:
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 1-296
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 29

Conread position: 1-296
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 1-305
Cow position:
Alignm length: 324
Alignm identity: 230
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 22, 32

Conread position: 1-307
Cow position:
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 29

Conread position: 1-310
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 30

Conread position: 1-315
Cow position:
Alignm length: 324
Alignm identity: 227
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 24, 73

Conread position: 1-315
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 110, 29

Conread position: 3-274
Cow position:
Alignm length: 280
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 25

Conread position: 4-216
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 29

Conread position: 4-217
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 29

Conread position: 4-229
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 39

Conread position: 4-230
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 150

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 100, 26

Conread position: 4-238
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 65

Conread position: 4-238
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 42

Conread position: 4-238
Cow position:
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 26

Conread position: 4-262
Cow position:
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 83

Conread position: 4-263
Cow position:
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 68

Conread position: 4-267
Cow position:
Alignm length: 272
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 4-267
Cow position:
Alignm length: 275
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 70

Conread position: 4-269
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 29

Conread position: 4-279
Cow position:
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 55

Conread position: 4-288
Cow position:
Alignm length: 293
Alignm identity: 187
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 29

Conread position: 4-307
Cow position:
Alignm length: 317
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 65

Conread position: 4-313
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 99, 26

Conread position: 5-238
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 98, 25

Conread position: 5-257
Cow position:
Alignm length: 261
Alignm identity: 186
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 125, 25

Conread position: 5-269
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 51

Conread position: 5-275
Cow position:
Alignm length: 278
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 50

Conread position: 5-299
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 27

Conread position: 5-307
Cow position:
Alignm length: 311
Alignm identity: 228
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 20, 30

Conread position: 6-305
Cow position:
Alignm length: 314
Alignm identity: 218
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 27

Conread position: 6-315
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 64

Conread position: 7-237
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 14, 26

Conread position: 7-252
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 7-257
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 13, 64

Conread position: 8-267
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 26, 155

Conread position: 9-256
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 23, 184

Conread position: 17-263
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 92, 13

Conread position: 17-305
Cow position:
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 18-305
Cow position:
Alignm length: 294
Alignm identity: 216
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 36, 12

Conread position: 20-307
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 83, 10

Conread position: 21-238
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 9

Conread position: 22-223
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 69, 8

Conread position: 22-307
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 5, 98

Conread position: 30-280
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 73, 246

Conread position: 33-225
Cow position:
Alignm length: 197
Alignm identity: 160
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 70, 105

Conread position: 33-229
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 161

Conread position: 33-230
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 96, 73

Conread position: 33-238
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 70, 155

Conread position: 33-238
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 70, 35

Conread position: 33-238
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 97

Conread position: 33-244
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 76

Conread position: 33-247
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 87, 65

Conread position: 33-269
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 34

Conread position: 33-289
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 163, 71

Conread position: 33-296
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 70, 31

Conread position: 33-307
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 29, 46

Conread position: 34-238
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 69, 111

Conread position: 34-304
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 176

Conread position: 34-312
Cow position:
Alignm length: 286
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 69, 157

Conread position: 36-274
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 67, 164

Conread position: 36-299
Cow position:
Alignm length: 268
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 31

Conread position: 37-253
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 115

Conread position: 38-299
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 67, 243

Conread position: 38-299
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 5

Conread position: 38-307
Cow position:
Alignm length: 276
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 227

Conread position: 39-227
Cow position:
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 99

Conread position: 39-238
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 41-262
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 42, 27

Conread position: 42-299
Cow position:
Alignm length: 265
Alignm identity: 199
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 62, 78

Conread position: 42-299
Cow position:
Alignm length: 264
Alignm identity: 195
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 61, 217

Conread position: 46-257
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 57, 109

Conread position: 47-228
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 147

Conread position: 48-263
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 189, 63

Conread position: 48-265
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 78

Conread position: 49-311
Cow position:
Alignm length: 276
Alignm identity: 203
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 55, 148

Conread position: 50-274
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 159

Conread position: 50-276
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 9

Conread position: 53-267
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 24, 97

Conread position: 53-299
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 73

Conread position: 59-238
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 59-296
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 76

Conread position: 61-305
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 71

Conread position: 62-238
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 83

Conread position: 63-257
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 109

Conread position: 63-305
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 22

Conread position: 67-287
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 119

Conread position: 70-263
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 33, 120

Conread position: 76-238
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 82-252
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 87-275
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 69

Conread position: 92-257
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 34

Conread position: 102-276
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 98

Conread position: 112-238
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 120-232
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 5

Conread position: 125-267
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 31

Conread position: 125-299
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 124

Conread position: 134-282
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 84

Conread position: 144-298
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 45

Show alignments to all cow chromosomes.