Cow genome map

Conread name: rova012_h11.y1

Conread position: 1-391
Cow position: chr13:39984513-39984903 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 365

Conread position: 1-506
Cow position: chr13:39930673-39931176 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 25

Conread position: 1-508
Cow position: chr13:22125122-22125629 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 298
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 457, 444

Conread position: 1-511
Cow position: chr13:56292330-56291830 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 111

Conread position: 1-518
Cow position: chr13:29183796-29183283 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 329
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 87, 80

Conread position: 1-518
Cow position: chr13:39984177-39984694 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 428

Conread position: 1-518
Cow position: chr13:39984261-39984778 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-520
Cow position: chr13:39930589-39931108 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 101

Conread position: 1-520
Cow position: chr13:39984345-39984864 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-523
Cow position: chr13:39984093-39984615 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-526
Cow position: chr13:22124870-22125396 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 311
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 240, 236

Conread position: 3-518
Cow position: chr13:39984011-39984526 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-508
Cow position: chr13:24162855-24163355 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 297
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 11-517
Cow position: chr13:56292410-56291909 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 320
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 213

Conread position: 19-308
Cow position: chr13:29183528-29183241 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 190
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 43

Conread position: 22-236
Cow position: chr13:56334107-56334321 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 23-529
Cow position: chr13:56333679-56334194 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 216

Conread position: 37-482
Cow position: chr13:56333609-56334054 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 276
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 72, 52

Conread position: 37-496
Cow position: chr13:22124822-22125281 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 280
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 253, 242

Conread position: 37-496
Cow position: chr13:24162548-24163007 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 276
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 253, 242

Conread position: 37-520
Cow position: chr13:24162632-24163115 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 284
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 204, 200

Conread position: 38-376
Cow position: chr13:56317487-56317823 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 212
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 64

Conread position: 38-399
Cow position: chr13:56292136-56291772 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 38-516
Cow position: chr13:56333526-56334004 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 290
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 63

Conread position: 39-392
Cow position: chr13:29183593-29183241 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 222
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 64

Conread position: 44-526
Cow position: chr13:39983636-39984114 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 292
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 11

Conread position: 47-520
Cow position: chr13:39983887-39984360 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 49-526
Cow position: chr13:39983973-39984450 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 58-320
Cow position: chr13:56334059-56334321 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 61-467
Cow position: chr13:56292194-56291790 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 49

Conread position: 72-516
Cow position: chr13:56292848-56292409 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 270
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 288, 73

Conread position: 122-434
Cow position: chr13:56317930-56318242 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 202
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 66, 84

Conread position: 140-526
Cow position: chr13:39983812-39984198 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 245
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 65

Conread position: 167-515
Cow position: chr13:39930587-39930936 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 224
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 88, 97

Conread position: 167-519
Cow position: chr13:24162426-24162778 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 210
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 250-520
Cow position: chr13:39930586-39930856 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 260, 266

Show alignments to all cow chromosomes.