Cow genome map

Conread name: rova012_h11.y1

Conread position: 1-298
Cow position:
Alignm length: 300
Alignm identity: 187
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 31

Conread position: 1-317
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 116, 109

Conread position: 1-320
Cow position:
Alignm length: 323
Alignm identity: 209
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 31

Conread position: 1-350
Cow position:
Alignm length: 350
Alignm identity: 211
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-355
Cow position:
Alignm length: 358
Alignm identity: 229
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 101, 91

Conread position: 1-396
Cow position:
Alignm length: 397
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 202

Conread position: 1-434
Cow position:
Alignm length: 435
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 269

Conread position: 1-435
Cow position:
Alignm length: 436
Alignm identity: 277
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 242, 238

Conread position: 1-437
Cow position:
Alignm length: 440
Alignm identity: 280
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 25

Conread position: 1-472
Cow position:
Alignm length: 474
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 377

Conread position: 1-480
Cow position:
Alignm length: 481
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 444

Conread position: 1-485
Cow position:
Alignm length: 485
Alignm identity: 286
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 412, 0

Conread position: 1-510
Cow position:
Alignm length: 514
Alignm identity: 323
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 101, 91

Conread position: 1-511
Cow position:
Alignm length: 522
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 1-515
Cow position:
Alignm length: 519
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 168

Conread position: 1-515
Cow position:
Alignm length: 518
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 11

Conread position: 1-516
Cow position:
Alignm length: 517
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 511, 0

Conread position: 1-516
Cow position:
Alignm length: 517
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 511, 0

Conread position: 1-516
Cow position:
Alignm length: 518
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 273

Conread position: 1-516
Cow position:
Alignm length: 520
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 98

Conread position: 1-516
Cow position:
Alignm length: 520
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 358

Conread position: 1-516
Cow position:
Alignm length: 518
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 197

Conread position: 1-516
Cow position:
Alignm length: 517
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 512, 0

Conread position: 1-517
Cow position:
Alignm length: 519
Alignm identity: 318
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 447, 436

Conread position: 1-518
Cow position:
Alignm length: 518
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-519
Cow position:
Alignm length: 520
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 412

Conread position: 1-519
Cow position:
Alignm length: 520
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 1-519
Cow position:
Alignm length: 520
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 91

Conread position: 1-519
Cow position:
Alignm length: 520
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 1-519
Cow position:
Alignm length: 520
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 452

Conread position: 1-519
Cow position:
Alignm length: 522
Alignm identity: 322
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 25, 37

Conread position: 1-519
Cow position:
Alignm length: 522
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 179

Conread position: 1-519
Cow position:
Alignm length: 522
Alignm identity: 324
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 91, 95

Conread position: 1-520
Cow position:
Alignm length: 522
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 365

Conread position: 1-520
Cow position:
Alignm length: 522
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 419

Conread position: 1-520
Cow position:
Alignm length: 520
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-520
Cow position:
Alignm length: 520
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-520
Cow position:
Alignm length: 521
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 444

Conread position: 1-520
Cow position:
Alignm length: 520
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-520
Cow position:
Alignm length: 521
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 284

Conread position: 1-520
Cow position:
Alignm length: 523
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 124

Conread position: 1-520
Cow position:
Alignm length: 522
Alignm identity: 319
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 69

Conread position: 1-520
Cow position:
Alignm length: 522
Alignm identity: 321
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 457, 452

Conread position: 1-520
Cow position:
Alignm length: 523
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 124

Conread position: 1-520
Cow position:
Alignm length: 525
Alignm identity: 304
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 109

Conread position: 1-520
Cow position:
Alignm length: 523
Alignm identity: 317
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 160, 166

Conread position: 1-521
Cow position:
Alignm length: 521
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-521
Cow position:
Alignm length: 523
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 189

Conread position: 1-521
Cow position:
Alignm length: 521
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-521
Cow position:
Alignm length: 523
Alignm identity: 317
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 161, 91

Conread position: 1-525
Cow position:
Alignm length: 527
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 45

Conread position: 1-525
Cow position:
Alignm length: 530
Alignm identity: 323
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 167, 150

Conread position: 1-525
Cow position:
Alignm length: 527
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 41

Conread position: 1-529
Cow position:
Alignm length: 531
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 92

Conread position: 1-529
Cow position:
Alignm length: 530
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 430

Conread position: 1-530
Cow position:
Alignm length: 531
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 452

Conread position: 1-530
Cow position:
Alignm length: 533
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 95

Conread position: 2-401
Cow position:
Alignm length: 400
Alignm identity: 246
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 327, 0

Conread position: 2-404
Cow position:
Alignm length: 407
Alignm identity: 266
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 25

Conread position: 2-495
Cow position:
Alignm length: 496
Alignm identity: 305
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 277, 305

Conread position: 2-516
Cow position:
Alignm length: 519
Alignm identity: 315
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 160, 166

Conread position: 2-517
Cow position:
Alignm length: 516
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-518
Cow position:
Alignm length: 519
Alignm identity: 312
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 106, 85

Conread position: 2-519
Cow position:
Alignm length: 520
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 24

Conread position: 2-519
Cow position:
Alignm length: 520
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 30

Conread position: 2-519
Cow position:
Alignm length: 520
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 364

Conread position: 2-519
Cow position:
Alignm length: 519
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 201

Conread position: 2-519
Cow position:
Alignm length: 524
Alignm identity: 319
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 47

Conread position: 2-526
Cow position:
Alignm length: 530
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 98

Conread position: 2-528
Cow position:
Alignm length: 528
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 196

Conread position: 3-516
Cow position:
Alignm length: 517
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 102

Conread position: 3-516
Cow position:
Alignm length: 519
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 236

Conread position: 3-518
Cow position:
Alignm length: 519
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 180

Conread position: 3-519
Cow position:
Alignm length: 519
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 97

Conread position: 3-520
Cow position:
Alignm length: 519
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 3-521
Cow position:
Alignm length: 523
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 11

Conread position: 3-524
Cow position:
Alignm length: 524
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 184

Conread position: 3-525
Cow position:
Alignm length: 529
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 96

Conread position: 3-530
Cow position:
Alignm length: 531
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 437

Conread position: 5-475
Cow position:
Alignm length: 471
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-519
Cow position:
Alignm length: 511
Alignm identity: 299
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 403, 409

Conread position: 21-525
Cow position:
Alignm length: 505
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 23-505
Cow position:
Alignm length: 486
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 344

Conread position: 23-525
Cow position:
Alignm length: 504
Alignm identity: 311
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 344, 330

Conread position: 25-520
Cow position:
Alignm length: 498
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 162

Conread position: 29-472
Cow position:
Alignm length: 446
Alignm identity: 267
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 10, 344

Conread position: 29-519
Cow position:
Alignm length: 493
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 82

Conread position: 29-520
Cow position:
Alignm length: 493
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 161

Conread position: 29-520
Cow position:
Alignm length: 496
Alignm identity: 301
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 126, 136

Conread position: 29-523
Cow position:
Alignm length: 497
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 154

Conread position: 31-519
Cow position:
Alignm length: 492
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 240

Conread position: 36-519
Cow position:
Alignm length: 484
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 37-483
Cow position:
Alignm length: 447
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 37-496
Cow position:
Alignm length: 461
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 23

Conread position: 38-471
Cow position:
Alignm length: 435
Alignm identity: 267
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 324, 334

Conread position: 38-517
Cow position:
Alignm length: 481
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 54

Conread position: 38-518
Cow position:
Alignm length: 483
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 328

Conread position: 38-519
Cow position:
Alignm length: 484
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 340

Conread position: 38-519
Cow position:
Alignm length: 484
Alignm identity: 295
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 246, 259

Conread position: 38-520
Cow position:
Alignm length: 485
Alignm identity: 303
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 230, 106

Conread position: 38-525
Cow position:
Alignm length: 492
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 62

Conread position: 38-529
Cow position:
Alignm length: 493
Alignm identity: 299
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 420, 415

Conread position: 43-258
Cow position:
Alignm length: 216
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 205, 0

Conread position: 46-510
Cow position:
Alignm length: 465
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 47-520
Cow position:
Alignm length: 478
Alignm identity: 294
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 54

Conread position: 48-518
Cow position:
Alignm length: 472
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 50

Conread position: 56-518
Cow position:
Alignm length: 469
Alignm identity: 285
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 43

Conread position: 56-520
Cow position:
Alignm length: 467
Alignm identity: 293
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 402, 397

Conread position: 59-525
Cow position:
Alignm length: 468
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 394

Conread position: 62-520
Cow position:
Alignm length: 459
Alignm identity: 271
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 78-525
Cow position:
Alignm length: 452
Alignm identity: 271
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 88

Conread position: 80-519
Cow position:
Alignm length: 442
Alignm identity: 265
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 272, 293

Conread position: 121-488
Cow position:
Alignm length: 371
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 171, 157

Conread position: 121-517
Cow position:
Alignm length: 397
Alignm identity: 234
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 121-519
Cow position:
Alignm length: 399
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 134-518
Cow position:
Alignm length: 387
Alignm identity: 243
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 150, 137

Conread position: 135-299
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 138-519
Cow position:
Alignm length: 382
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 195-519
Cow position:
Alignm length: 327
Alignm identity: 219
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 155, 170

Conread position: 195-520
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 163

Conread position: 205-519
Cow position:
Alignm length: 317
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 113

Conread position: 205-525
Cow position:
Alignm length: 322
Alignm identity: 206
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 154, 161

Conread position: 206-483
Cow position:
Alignm length: 278
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 208-519
Cow position:
Alignm length: 313
Alignm identity: 206
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 242, 237

Conread position: 228-525
Cow position:
Alignm length: 298
Alignm identity: 188
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 281-521
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 162, 154

Show alignments to all cow chromosomes.