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Cow genome map

           
Conread name:
           
rova012_h11.y1
        

               
Conread position:
               
1-180
               

               
Cow position:
               
chr18:51765129-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
105, 91
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr18:52448229-52448410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr18:43022202-43022017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:53560543-53560749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 103
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr18:56494293-56494507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:1418367-1418609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr18:53509771-53510022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
220, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:42984775-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:56329150-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
109, 113
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:42674704-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:50246526-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr18:50282039-50282360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
242, 238
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr18:54968235-54968561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
118, 109
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr18:51839112-51838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:43174823-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 161
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr18:50251196-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
246, 220
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr18:51367566-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr18:50083899-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr18:51839196-51838845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr18:51969704-51970047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr18:51812267-51811899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
258, 266
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:44397906-44397511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:42837487-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 101
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr18:42744184-42743785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr18:50281955-50282360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
175, 184
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr18:55066745-55066335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr18:43048699-43048281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 0
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:52428586-52429010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 368
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:52433767-52434191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 251
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr18:50048606-50048181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
280, 0
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr18:50083983-50084416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
300, 330
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr18:51812351-51811918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
353, 365
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr18:33092741-33092313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
252, 246
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:56247452-56246999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr18:49022843-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr18:42744268-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
443, 436
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr18:44240374-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr18:42837571-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 185
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr18:40306870-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr18:50246358-50246837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 97
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr18:40075220-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 97
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr18:50030872-50030388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
71, 357
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr18:44184437-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 352
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr18:50099844-50100329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 110
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr18:53635343-53634859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr18:56128822-56129306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr18:1418115-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr18:42693683-42693194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
176, 182
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:55018413-55018903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 107
               

               
Conread position:
               
1-494
               

               
Cow position:
               
chr18:33092825-33092338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 98
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr18:14453823-14453325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr18:49032429-49031935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 0
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr18:51400729-51401226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 206
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:51752222-51751724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 184
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr18:33064069-33063569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 100
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr18:14453259-14452757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr18:41198276-41198779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
433, 448
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:50849036-50849537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr18:52447893-52448397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 495
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:50271658-50272163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 353
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr18:42792421-42792929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 413
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr18:43120294-43119785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr18:50022206-50021691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 279
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr18:50251031-50251537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:50083563-50084073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 97
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:50246106-50246616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 93
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:50295217-50295727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 97
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:51789528-51789018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 204
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:55018161-55018671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51400645-51401156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 109
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52447137-52447648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 223
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52447389-52447900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr18:44253862-44253351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 366
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:53498082-53498600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:55523337-55523851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:33064825-33064310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 97
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:40306450-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:40324435-40323920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 100
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:41198024-41198539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:41948815-41948302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
489, 0
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:41948899-41948384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:42675376-42674860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:42693767-42693251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:42744436-42743921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 269
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:42792169-42792684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:42959934-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 100
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:42960102-42959596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 104
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:42985195-42984680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 97
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:43093722-43093209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:43175579-43175064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:44154425-44153908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:44184605-44184089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 104
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:44253526-44253025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:49021350-49021859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
442, 143
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:49022759-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:50030953-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:50059006-50058493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 97
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:50099592-50100107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 97
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:50250871-50251376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 28
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:50848364-50848880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 104
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:50848952-50849468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 107
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:51400309-51400824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 444
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:51765633-51765117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 114
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:52427998-52428513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 105
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:54979589-54980104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 102
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:54980093-54980607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 101
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:54992933-54993448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 32
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:55008588-55009103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 102
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:56434158-56434673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:40074968-40075484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 20
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:41198108-41198624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 97
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:42792337-42792853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 97
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:43093641-43093125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:43167737-43168253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:43167821-43168337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:50022374-50021855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 343
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:50048858-50048342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 97
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:50059090-50058574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 107
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:50059426-50058910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:50099340-50099856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:50099676-50100192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:50246274-50246790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:50295301-50295817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 97
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:50295385-50295900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 105
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:53610354-53609838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 134
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:1417863-1418380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 306
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:14453991-14453474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:42791245-42791762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:42791749-42792266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:42791917-42792434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:43093305-43092789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 0
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:43093881-43093376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 129
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:50049198-50048677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:50059594-50059077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 346
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:50083311-50083828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 107
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:50083395-50083912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:50099508-50100025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 100
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:50245854-50246371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:50246190-50246707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:50271490-50272007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 97
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:50848868-50849385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:51752054-51751535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 205
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:53610438-53609921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:53635931-53635414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:54966896-54967413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:54967985-54968500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:54993521-54994035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 110
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:55008840-55009355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 100
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:55066997-55066480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:55523505-55524022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 110
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:56247784-56247275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 0
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:56329402-56328885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:33064489-33063971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 101
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:40075136-40075654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 91
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:40324519-40324001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:41197688-41198206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:41949235-41948717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 183
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:42674956-42674438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 191
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:42827433-42827956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:42960270-42959752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 277
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:42985111-42984593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:42985447-42984929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 99
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:43022706-43022188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 127
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:43022790-43022272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:43093389-43092871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 97
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:43175243-43174725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:44240038-44240556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:44240206-44240724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:44240290-44240808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 183
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:44398326-44397808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:50281787-50282305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:52447221-52447739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:53498340-53498858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:53509267-53509785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:53525721-53526239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:53525805-53526323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 281
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:53560123-53560641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:56247962-56247438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:56316330-56316848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
436, 449
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:56329486-56328968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 449
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:56329654-56329136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:41197856-41198375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:42744352-42743833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 185
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:42792001-42792520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
457, 450
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:43093797-43093290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:43167905-43168424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:44239870-44240389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 105
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:50246022-50246541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:50848784-50849303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 365
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:52447305-52447824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:52447641-52448160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53559871-53560391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53610270-53609751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
107, 97
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr18:33093077-33092557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 102
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr18:42790993-42791513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr18:42791413-42791933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 88
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr18:42960432-42959918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 87
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr18:50848532-50849052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr18:53559703-53560224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:40086485-40085970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
446, 269
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:43175075-43174553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
418, 413
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:43175411-43174889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:50099004-50099525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 93
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:51789108-51788588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
122, 112
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr18:40086151-40085635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 105
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr18:51766053-51765530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 88
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:40306366-40306890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 198
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:40306534-40307058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:41949319-41948795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 267
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:42744604-42744080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:42791161-42791685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:42792253-42792777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
457, 450
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:42837823-42837299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
442, 436
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:50848616-50849140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:53636099-53635575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:54967316-54967837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
105, 88
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:54979925-54980449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 183
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:55017909-55018433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 108
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr18:33064237-33063712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 97
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr18:54967484-54968006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 183
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:14453907-14453379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:51400393-51400921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:52428250-52428778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 105
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:52433431-52433959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:53635679-53635151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 277
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:55523673-55524201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:56329906-56329378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:56330074-56329546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 198
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:40306786-40307315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:41197604-41198133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:41198192-41198721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:41949151-41948622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:43093557-43093028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:43120126-43119597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 168
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:49032849-49032320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 200
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:49033353-49032824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:51812687-51812158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:56247616-56247097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:56329822-56329293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr18:56264938-56264606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr18:52011909-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
106, 99
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr18:56316583-56316930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
178, 174
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr18:42959849-42959426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr18:50246443-50246872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr18:56316247-56316734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
107, 96
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr18:53610185-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
2-510
               

               
Cow position:
               
chr18:53635510-53635003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr18:52012329-52011815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 101
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr18:52427747-52428261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 356
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr18:52447558-52448073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
512, 0
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr18:52447810-52448326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
478, 0
               

               
Conread position:
               
2-518
               

               
Cow position:
               
chr18:49032596-49032080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
2-518
               

               
Cow position:
               
chr18:56128655-56129171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
510, 477
               

               
Conread position:
               
2-519
               

               
Cow position:
               
chr18:49033100-49032583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
2-522
               

               
Cow position:
               
chr18:53559788-53560308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 197
               

               
Conread position:
               
2-529
               

               
Cow position:
               
chr18:52433096-52433623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
448, 440
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr18:43053428-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr18:56267430-56267129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr18:43022368-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-433
               

               
Cow position:
               
chr18:44253118-44252698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
245, 200
               

               
Conread position:
               
3-473
               

               
Cow position:
               
chr18:56316499-56316970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
3-476
               

               
Cow position:
               
chr18:43022453-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
3-477
               

               
Cow position:
               
chr18:56329317-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 364
               

               
Conread position:
               
3-489
               

               
Cow position:
               
chr18:55497676-55497189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 276
               

               
Conread position:
               
3-501
               

               
Cow position:
               
chr18:50031035-50030535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 102
               

               
Conread position:
               
3-506
               

               
Cow position:
               
chr18:44154169-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 189
               

               
Conread position:
               
3-510
               

               
Cow position:
               
chr18:42837654-42837146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 268
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr18:49032680-49032171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
3-515
               

               
Cow position:
               
chr18:44253441-44252942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr18:40306703-40307217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr18:41197774-41198287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr18:42744519-42744005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr18:42837738-42837224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr18:51367816-51367303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 204
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr18:56128739-56129252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
3-518
               

               
Cow position:
               
chr18:40306619-40307135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
3-518
               

               
Cow position:
               
chr18:42791666-42792182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-518
               

               
Cow position:
               
chr18:49033268-49032752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
3-518
               

               
Cow position:
               
chr18:51765968-51765451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 121
               

               
Conread position:
               
3-518
               

               
Cow position:
               
chr18:56316163-56316679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-519
               

               
Cow position:
               
chr18:42985026-42984509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
3-519
               

               
Cow position:
               
chr18:42985529-42985013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 125
               

               
Conread position:
               
3-519
               

               
Cow position:
               
chr18:53586969-53586452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
3-519
               

               
Cow position:
               
chr18:56128319-56128836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:42744687-42744169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:42837906-42837388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-522
               

               
Cow position:
               
chr18:44398156-44397637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 358
               

               
Conread position:
               
3-523
               

               
Cow position:
               
chr18:53635846-53635325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chr18:42791498-42792021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
3-526
               

               
Cow position:
               
chr18:33064404-33063880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
3-529
               

               
Cow position:
               
chr18:40324602-40324075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 267
               

               
Conread position:
               
3-529
               

               
Cow position:
               
chr18:41948982-41948455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
3-530
               

               
Cow position:
               
chr18:44398240-44397713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
445, 438
               

               
Conread position:
               
4-529
               

               
Cow position:
               
chr18:33065074-33064549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
5-511
               

               
Cow position:
               
chr18:51812767-51812261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 200
               

               
Conread position:
               
5-517
               

               
Cow position:
               
chr18:42675036-42674524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 93
               

               
Conread position:
               
5-517
               

               
Cow position:
               
chr18:50083735-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-518
               

               
Cow position:
               
chr18:50022286-50021770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 104
               

               
Conread position:
               
5-518
               

               
Cow position:
               
chr18:51400565-51401078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
448, 435
               

               
Conread position:
               
5-519
               

               
Cow position:
               
chr18:44398406-44397892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-519
               

               
Cow position:
               
chr18:50083483-50083997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 360
               

               
Conread position:
               
5-519
               

               
Cow position:
               
chr18:51838586-51838081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
5-521
               

               
Cow position:
               
chr18:52012410-52011894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 106
               

               
Conread position:
               
5-525
               

               
Cow position:
               
chr18:51789776-51789256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 361
               

               
Conread position:
               
5-529
               

               
Cow position:
               
chr18:51400481-51401005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-530
               

               
Cow position:
               
chr18:51789608-51789083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 200
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr18:49032509-49032045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
6-518
               

               
Cow position:
               
chr18:49032761-49032248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
6-518
               

               
Cow position:
               
chr18:51368401-51367888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 179
               

               
Conread position:
               
6-519
               

               
Cow position:
               
chr18:42675539-42675026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
7-516
               

               
Cow position:
               
chr18:42693929-42693420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 93
               

               
Conread position:
               
7-517
               

               
Cow position:
               
chr18:50021945-50021432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 91
               

               
Conread position:
               
7-518
               

               
Cow position:
               
chr18:42791839-42792350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 101
               

               
Conread position:
               
11-507
               

               
Cow position:
               
chr18:51789266-51788770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
439, 428
               

               
Conread position:
               
18-516
               

               
Cow position:
               
chr18:49022690-49023190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 153
               

               
Conread position:
               
18-530
               

               
Cow position:
               
chr18:14454059-14453546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
19-443
               

               
Cow position:
               
chr18:51367632-51367208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 145
               

               
Conread position:
               
19-523
               

               
Cow position:
               
chr18:42675190-42674686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 84
               

               
Conread position:
               
20-426
               

               
Cow position:
               
chr18:56494144-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
358, 0
               

               
Conread position:
               
20-474
               

               
Cow position:
               
chr18:53498525-53498979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
20-502
               

               
Cow position:
               
chr18:53586363-53585881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
423, 393
               

               
Conread position:
               
20-517
               

               
Cow position:
               
chr18:41197539-41198036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 78
               

               
Conread position:
               
20-525
               

               
Cow position:
               
chr18:53586699-53586194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 90
               

               
Conread position:
               
21-492
               

               
Cow position:
               
chr18:42674852-42674383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 81
               

               
Conread position:
               
21-516
               

               
Cow position:
               
chr18:40324751-40324256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 93
               

               
Conread position:
               
21-516
               

               
Cow position:
               
chr18:43023106-43022611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
21-516
               

               
Cow position:
               
chr18:43175307-43174811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
432, 421
               

               
Conread position:
               
21-516
               

               
Cow position:
               
chr18:51789676-51789181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 248
               

               
Conread position:
               
21-516
               

               
Cow position:
               
chr18:52447745-52448240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-520
               

               
Cow position:
               
chr18:52447073-52447572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 286
               

               
Conread position:
               
21-520
               

               
Cow position:
               
chr18:52447493-52447992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-522
               

               
Cow position:
               
chr18:51812415-51811914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
420, 427
               

               
Conread position:
               
22-479
               

               
Cow position:
               
chr18:55066808-55066351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 344
               

               
Conread position:
               
22-519
               

               
Cow position:
               
chr18:53509456-53509953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 162
               

               
Conread position:
               
23-496
               

               
Cow position:
               
chr18:43174969-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 88
               

               
Conread position:
               
23-499
               

               
Cow position:
               
chr18:51751948-51751476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 246
               

               
Conread position:
               
23-510
               

               
Cow position:
               
chr18:50059656-50059169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-511
               

               
Cow position:
               
chr18:54979527-54980015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 89
               

               
Conread position:
               
23-516
               

               
Cow position:
               
chr18:41949045-41948552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-516
               

               
Cow position:
               
chr18:51839426-51838932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 184
               

               
Conread position:
               
23-516
               

               
Cow position:
               
chr18:56434021-56434505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
23-519
               

               
Cow position:
               
chr18:1417969-1418465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 201
               

               
Conread position:
               
23-519
               

               
Cow position:
               
chr18:43175137-43174641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
480, 475
               

               
Conread position:
               
23-519
               

               
Cow position:
               
chr18:43175473-43174977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-471
               

               
Cow position:
               
chr18:22634776-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 101
               

               
Conread position:
               
24-516
               

               
Cow position:
               
chr18:51874192-51874684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
26-476
               

               
Cow position:
               
chr18:42984918-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 76
               

               
Conread position:
               
26-516
               

               
Cow position:
               
chr18:49022616-49023106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
26-516
               

               
Cow position:
               
chr18:51367709-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 60
               

               
Conread position:
               
26-516
               

               
Cow position:
               
chr18:54993378-54993868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 158
               

               
Conread position:
               
26-517
               

               
Cow position:
               
chr18:50848725-50849216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
26-519
               

               
Cow position:
               
chr18:44240147-44240640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 102
               

               
Conread position:
               
26-520
               

               
Cow position:
               
chr18:43022933-43022439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 330
               

               
Conread position:
               
26-522
               

               
Cow position:
               
chr18:53560315-53560808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 246
               

               
Conread position:
               
26-522
               

               
Cow position:
               
chr18:56493726-56494226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
26-525
               

               
Cow position:
               
chr18:56128088-56128590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
26-530
               

               
Cow position:
               
chr18:51812830-51812326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
27-488
               

               
Cow position:
               
chr18:44397964-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 138
               

               
Conread position:
               
27-496
               

               
Cow position:
               
chr18:43094185-43093722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 24
               

               
Conread position:
               
27-506
               

               
Cow position:
               
chr18:42724785-42724306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
74, 131
               

               
Conread position:
               
27-506
               

               
Cow position:
               
chr18:43168099-43168577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 448
               

               
Conread position:
               
27-507
               

               
Cow position:
               
chr18:49021622-49022103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
419, 413
               

               
Conread position:
               
27-511
               

               
Cow position:
               
chr18:55066887-55066403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 340
               

               
Conread position:
               
27-516
               

               
Cow position:
               
chr18:51812913-51812424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
27-516
               

               
Cow position:
               
chr18:54967090-54967579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 84
               

               
Conread position:
               
27-519
               

               
Cow position:
               
chr18:1418057-1418549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 112
               

               
Conread position:
               
27-519
               

               
Cow position:
               
chr18:44239813-44240304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 11
               

               
Conread position:
               
27-519
               

               
Cow position:
               
chr18:54992874-54993367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
27-525
               

               
Cow position:
               
chr18:42791607-42792105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-183
               

               
Cow position:
               
chr18:43119679-43119524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr18:53509714-53510027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
267, 0
               

               
Conread position:
               
28-501
               

               
Cow position:
               
chr18:56434521-56434994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
290, 244
               

               
Conread position:
               
28-516
               

               
Cow position:
               
chr18:40086965-40086474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
28-516
               

               
Cow position:
               
chr18:51368546-51368058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 161
               

               
Conread position:
               
28-517
               

               
Cow position:
               
chr18:50059147-50058658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-519
               

               
Cow position:
               
chr18:53610495-53610004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 332
               

               
Conread position:
               
28-530
               

               
Cow position:
               
chr18:40086542-40086040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
493, 343
               

               
Conread position:
               
28-530
               

               
Cow position:
               
chr18:42675097-42674595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 158
               

               
Conread position:
               
29-316
               

               
Cow position:
               
chr18:40075416-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-347
               

               
Cow position:
               
chr18:43119762-43119445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 172
               

               
Conread position:
               
29-497
               

               
Cow position:
               
chr18:55523869-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 73
               

               
Conread position:
               
29-520
               

               
Cow position:
               
chr18:40086712-40086218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 31
               

               
Conread position:
               
29-525
               

               
Cow position:
               
chr18:40306309-40306806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 243
               

               
Conread position:
               
29-525
               

               
Cow position:
               
chr18:54992625-54993121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-529
               

               
Cow position:
               
chr18:55523785-55524285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
30-518
               

               
Cow position:
               
chr18:50245714-50246203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
30-518
               

               
Cow position:
               
chr18:53635735-53635246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
30-518
               

               
Cow position:
               
chr18:56128430-56128919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
31-510
               

               
Cow position:
               
chr18:55523450-55523930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 64
               

               
Conread position:
               
31-516
               

               
Cow position:
               
chr18:54992710-54993196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
31-516
               

               
Cow position:
               
chr18:55018107-55018592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 92
               

               
Conread position:
               
31-518
               

               
Cow position:
               
chr18:54979450-54979938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 250
               

               
Conread position:
               
31-519
               

               
Cow position:
               
chr18:56493902-56494391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 74
               

               
Conread position:
               
32-511
               

               
Cow position:
               
chr18:54967011-54967490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 246
               

               
Conread position:
               
32-516
               

               
Cow position:
               
chr18:22634617-22635100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
32-516
               

               
Cow position:
               
chr18:54979788-54980272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
32-518
               

               
Cow position:
               
chr18:54992796-54993282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 91
               

               
Conread position:
               
32-518
               

               
Cow position:
               
chr18:56248181-56247687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 17
               

               
Conread position:
               
32-520
               

               
Cow position:
               
chr18:55017856-55018344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 167
               

               
Conread position:
               
32-525
               

               
Cow position:
               
chr18:54967263-54967753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
84, 91
               

               
Conread position:
               
32-529
               

               
Cow position:
               
chr18:43175707-43175219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
33-516
               

               
Cow position:
               
chr18:42837959-42837476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
33-519
               

               
Cow position:
               
chr18:43167601-43168087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 100
               

               
Conread position:
               
33-529
               

               
Cow position:
               
chr18:33064877-33064381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 234
               

               
Conread position:
               
34-436
               

               
Cow position:
               
chr18:53509635-53510037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
34-513
               

               
Cow position:
               
chr18:53586518-53586038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
34-516
               

               
Cow position:
               
chr18:43120345-43119863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 386
               

               
Conread position:
               
36-511
               

               
Cow position:
               
chr18:55008541-55009014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
36-518
               

               
Cow position:
               
chr18:50848147-50848629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
37-338
               

               
Cow position:
               
chr18:50021660-50021361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
37-361
               

               
Cow position:
               
chr18:42959739-42959415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-415
               

               
Cow position:
               
chr18:55523961-55524339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr18:43119922-43119461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 69
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr18:51970321-51970774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
37-510
               

               
Cow position:
               
chr18:51765765-51765292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
225, 231
               

               
Conread position:
               
37-515
               

               
Cow position:
               
chr18:22634705-22635183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 155
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr18:43120669-43120199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr18:50271610-50272089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr18:52427866-52428345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 243
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr18:52433047-52433526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr18:52433215-52433694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-517
               

               
Cow position:
               
chr18:1417815-1418295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 107
               

               
Conread position:
               
37-517
               

               
Cow position:
               
chr18:42827385-42827865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
37-517
               

               
Cow position:
               
chr18:49022545-49023023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
37-518
               

               
Cow position:
               
chr18:42790945-42791426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 65
               

               
Conread position:
               
37-518
               

               
Cow position:
               
chr18:50848484-50848965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
37-518
               

               
Cow position:
               
chr18:51368453-51367972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 147
               

               
Conread position:
               
37-519
               

               
Cow position:
               
chr18:41949367-41948885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-519
               

               
Cow position:
               
chr18:42985243-42984761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 146
               

               
Conread position:
               
37-519
               

               
Cow position:
               
chr18:44184737-44184255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 246
               

               
Conread position:
               
37-519
               

               
Cow position:
               
chr18:44398038-44397556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-519
               

               
Cow position:
               
chr18:56329702-56329220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-520
               

               
Cow position:
               
chr18:42675424-42674941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
37-520
               

               
Cow position:
               
chr18:43022838-43022355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 237
               

               
Conread position:
               
37-520
               

               
Cow position:
               
chr18:43120006-43119523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 220
               

               
Conread position:
               
37-520
               

               
Cow position:
               
chr18:44184653-44184170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-520
               

               
Cow position:
               
chr18:44184905-44184422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 403
               

               
Conread position:
               
37-520
               

               
Cow position:
               
chr18:50049074-50048591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
37-520
               

               
Cow position:
               
chr18:53560075-53560559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
37-522
               

               
Cow position:
               
chr18:53559991-53560476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-523
               

               
Cow position:
               
chr18:44184821-44184335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-524
               

               
Cow position:
               
chr18:50083683-50084170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 246
               

               
Conread position:
               
37-525
               

               
Cow position:
               
chr18:41197976-41198464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-525
               

               
Cow position:
               
chr18:51368117-51367630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
410, 308
               

               
Conread position:
               
37-525
               

               
Cow position:
               
chr18:51812987-51812499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-529
               

               
Cow position:
               
chr18:44184485-44183993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 233
               

               
Conread position:
               
37-529
               

               
Cow position:
               
chr18:52427698-52428190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 405
               

               
Conread position:
               
37-530
               

               
Cow position:
               
chr18:55008792-55009284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 86
               

               
Conread position:
               
38-276
               

               
Cow position:
               
chr18:51367445-51367207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-340
               

               
Cow position:
               
chr18:50030578-50030281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
38-397
               

               
Cow position:
               
chr18:51765260-51764901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 54
               

               
Conread position:
               
38-438
               

               
Cow position:
               
chr18:51839243-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-485
               

               
Cow position:
               
chr18:50281908-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
222, 231
               

               
Conread position:
               
38-486
               

               
Cow position:
               
chr18:52011957-52011506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
205, 201
               

               
Conread position:
               
38-491
               

               
Cow position:
               
chr18:50021830-50021374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 143
               

               
Conread position:
               
38-495
               

               
Cow position:
               
chr18:53586429-53585972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
38-505
               

               
Cow position:
               
chr18:54968104-54968570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
38-507
               

               
Cow position:
               
chr18:51765680-51765211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
140, 146
               

               
Conread position:
               
38-507
               

               
Cow position:
               
chr18:51874045-51874507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
411, 114
               

               
Conread position:
               
38-507
               

               
Cow position:
               
chr18:51969248-51969706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
38-511
               

               
Cow position:
               
chr18:40074921-40075394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
38-514
               

               
Cow position:
               
chr18:53498035-53498514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
262, 405
               

               
Conread position:
               
38-514
               

               
Cow position:
               
chr18:54979374-54979850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 329
               

               
Conread position:
               
38-515
               

               
Cow position:
               
chr18:51368284-51367807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
420, 416
               

               
Conread position:
               
38-516
               

               
Cow position:
               
chr18:49033148-49032670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-516
               

               
Cow position:
               
chr18:54993054-54993532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 60
               

               
Conread position:
               
38-517
               

               
Cow position:
               
chr18:33064284-33063805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
38-517
               

               
Cow position:
               
chr18:40306235-40306714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
38-517
               

               
Cow position:
               
chr18:51765848-51765368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
38-518
               

               
Cow position:
               
chr18:49032980-49032500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 248
               

               
Conread position:
               
38-518
               

               
Cow position:
               
chr18:50048905-50048425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
38-518
               

               
Cow position:
               
chr18:51752101-51751620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
476, 0
               

               
Conread position:
               
38-518
               

               
Cow position:
               
chr18:51789323-51788843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
38-518
               

               
Cow position:
               
chr18:51812566-51812086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
38-519
               

               
Cow position:
               
chr18:42675255-42674774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 160
               

               
Conread position:
               
38-519
               

               
Cow position:
               
chr18:43022501-43022020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-519
               

               
Cow position:
               
chr18:49032896-49032415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-519
               

               
Cow position:
               
chr18:51368621-51368139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 236
               

               
Conread position:
               
38-519
               

               
Cow position:
               
chr18:51765512-51765031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 146
               

               
Conread position:
               
38-520
               

               
Cow position:
               
chr18:42985326-42984844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 68
               

               
Conread position:
               
38-520
               

               
Cow position:
               
chr18:51789827-51789345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-520
               

               
Cow position:
               
chr18:51969575-51970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 39
               

               
Conread position:
               
38-523
               

               
Cow position:
               
chr18:44153720-44153249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
38-523
               

               
Cow position:
               
chr18:52012209-52011724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 233
               

               
Conread position:
               
38-524
               

               
Cow position:
               
chr18:33064704-33064218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
38-524
               

               
Cow position:
               
chr18:50059725-50059239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-525
               

               
Cow position:
               
chr18:51752269-51751782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 166
               

               
Conread position:
               
38-525
               

               
Cow position:
               
chr18:54993306-54993793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 146
               

               
Conread position:
               
38-525
               

               
Cow position:
               
chr18:55017778-55018265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
38-528
               

               
Cow position:
               
chr18:53509556-53510045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
38-529
               

               
Cow position:
               
chr18:51874129-51874613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 31
               

               
Conread position:
               
38-529
               

               
Cow position:
               
chr18:51969173-51969644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
38-530
               

               
Cow position:
               
chr18:40324650-40324158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
38-530
               

               
Cow position:
               
chr18:51789407-51788915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 236
               

               
Conread position:
               
38-530
               

               
Cow position:
               
chr18:56329953-56329461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-449
               

               
Cow position:
               
chr18:51874291-51874699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 145
               

               
Conread position:
               
39-516
               

               
Cow position:
               
chr18:52427532-52428009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 401
               

               
Conread position:
               
39-517
               

               
Cow position:
               
chr18:42985577-42985099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 229
               

               
Conread position:
               
39-519
               

               
Cow position:
               
chr18:52447007-52447487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 352
               

               
Conread position:
               
39-529
               

               
Cow position:
               
chr18:44239740-44240230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 235
               

               
Conread position:
               
39-529
               

               
Cow position:
               
chr18:52432881-52433371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 402
               

               
Conread position:
               
40-516
               

               
Cow position:
               
chr18:42960315-42959839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 149
               

               
Conread position:
               
40-517
               

               
Cow position:
               
chr18:50031082-50030606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
41-510
               

               
Cow position:
               
chr18:54967773-54968240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 263
               

               
Conread position:
               
41-519
               

               
Cow position:
               
chr18:42694063-42693585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
41-522
               

               
Cow position:
               
chr18:53509224-53509704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
41-522
               

               
Cow position:
               
chr18:53525678-53526158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
42-530
               

               
Cow position:
               
chr18:44398453-44397965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
43-516
               

               
Cow position:
               
chr18:52446927-52447400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
438, 432
               

               
Conread position:
               
43-516
               

               
Cow position:
               
chr18:56433787-56434253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
103, 230
               

               
Conread position:
               
43-518
               

               
Cow position:
               
chr18:50022587-50022109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
43-519
               

               
Cow position:
               
chr18:53526015-53526489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
43-521
               

               
Cow position:
               
chr18:43048741-43048265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
43-530
               

               
Cow position:
               
chr18:40324980-40324494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
44-516
               

               
Cow position:
               
chr18:33093118-33092645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
465, 0
               

               
Conread position:
               
44-516
               

               
Cow position:
               
chr18:51766093-51765621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
46-525
               

               
Cow position:
               
chr18:42744727-42744248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
47-519
               

               
Cow position:
               
chr18:49022303-49022773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
217, 210
               

               
Conread position:
               
48-508
               

               
Cow position:
               
chr18:54980056-54980516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 136
               

               
Conread position:
               
48-529
               

               
Cow position:
               
chr18:44253899-44253418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
396, 382
               

               
Conread position:
               
49-492
               

               
Cow position:
               
chr18:14453295-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
49-521
               

               
Cow position:
               
chr18:50848328-50848800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
49-524
               

               
Cow position:
               
chr18:53497965-53498443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
232, 56
               

               
Conread position:
               
50-522
               

               
Cow position:
               
chr18:51765416-51764944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
52-519
               

               
Cow position:
               
chr18:49033387-49032919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
54-516
               

               
Cow position:
               
chr18:33065108-33064645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
54-517
               

               
Cow position:
               
chr18:56316047-56316510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
55-516
               

               
Cow position:
               
chr18:55067111-55066650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
56-518
               

               
Cow position:
               
chr18:50245993-50246455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
56-519
               

               
Cow position:
               
chr18:42724840-42724377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
112, 104
               

               
Conread position:
               
56-530
               

               
Cow position:
               
chr18:51838786-51838317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
187, 178
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr18:43053457-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
58-516
               

               
Cow position:
               
chr18:50098977-50099436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 210
               

               
Conread position:
               
58-525
               

               
Cow position:
               
chr18:40324882-40324415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
58-530
               

               
Cow position:
               
chr18:56330185-56329713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 126
               

               
Conread position:
               
59-518
               

               
Cow position:
               
chr18:49022483-49022940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
60-517
               

               
Cow position:
               
chr18:50281678-50282137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
61-511
               

               
Cow position:
               
chr18:49022233-49022681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
62-517
               

               
Cow position:
               
chr18:50083288-50083743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 121
               

               
Conread position:
               
62-530
               

               
Cow position:
               
chr18:51969029-51969479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 144
               

               
Conread position:
               
65-516
               

               
Cow position:
               
chr18:41197500-41197951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
65-518
               

               
Cow position:
               
chr18:40074866-40075317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
65-520
               

               
Cow position:
               
chr18:51752326-51751871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
205, 217
               

               
Conread position:
               
65-520
               

               
Cow position:
               
chr18:51813043-51812588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
68-518
               

               
Cow position:
               
chr18:40306181-40306631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
68-530
               

               
Cow position:
               
chr18:43120395-43119933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
69-513
               

               
Cow position:
               
chr18:50295201-50295645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
72-518
               

               
Cow position:
               
chr18:53636112-53635666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-518
               

               
Cow position:
               
chr18:56128053-56128499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 368
               

               
Conread position:
               
72-519
               

               
Cow position:
               
chr18:43175592-43175145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-530
               

               
Cow position:
               
chr18:51839545-51839087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
74-495
               

               
Cow position:
               
chr18:55497688-55497267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
78-516
               

               
Cow position:
               
chr18:50031128-50030691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 161
               

               
Conread position:
               
80-529
               

               
Cow position:
               
chr18:55523332-55523781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
269, 293
               

               
Conread position:
               
83-518
               

               
Cow position:
               
chr18:50022376-50021938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
162, 169
               

               
Conread position:
               
87-511
               

               
Cow position:
               
chr18:53587137-53586712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
106-518
               

               
Cow position:
               
chr18:50271427-50271839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 176
               

               
Conread position:
               
107-518
               

               
Cow position:
               
chr18:50098942-50099353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 245
               

               
Conread position:
               
107-518
               

               
Cow position:
               
chr18:50281641-50282052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
113-516
               

               
Cow position:
               
chr18:54979365-54979768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
240, 253
               

               
Conread position:
               
113-523
               

               
Cow position:
               
chr18:44154481-44154068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 168
               

               
Conread position:
               
113-523
               

               
Cow position:
               
chr18:44184913-44184503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 254
               

               
Conread position:
               
113-525
               

               
Cow position:
               
chr18:54966924-54967336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
256, 251
               

               
Conread position:
               
113-529
               

               
Cow position:
               
chr18:42837963-42837547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
114-525
               

               
Cow position:
               
chr18:55008451-55008860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
238, 107
               

               
Conread position:
               
114-529
               

               
Cow position:
               
chr18:52427523-52427938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
114-529
               

               
Cow position:
               
chr18:52432872-52433287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
116-517
               

               
Cow position:
               
chr18:50049251-50048846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 171
               

               
Conread position:
               
116-530
               

               
Cow position:
               
chr18:44398463-44398049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
117-530
               

               
Cow position:
               
chr18:55017773-55018186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 250
               

               
Conread position:
               
119-484
               

               
Cow position:
               
chr18:56267481-56267116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
121-523
               

               
Cow position:
               
chr18:50059726-50059324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
122, 118
               

               
Conread position:
               
122-341
               

               
Cow position:
               
chr18:42693143-42692925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 146
               

               
Conread position:
               
122-506
               

               
Cow position:
               
chr18:51970322-51970698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
133, 51
               

               
Conread position:
               
123-529
               

               
Cow position:
               
chr18:42985577-42985171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 243
               

               
Conread position:
               
124-516
               

               
Cow position:
               
chr18:51400264-51400656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
124-519
               

               
Cow position:
               
chr18:43023087-43022692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 232
               

               
Conread position:
               
126-524
               

               
Cow position:
               
chr18:42790866-42791264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 215
               

               
Conread position:
               
129-523
               

               
Cow position:
               
chr18:43048739-43048345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
131-517
               

               
Cow position:
               
chr18:50848077-50848460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
134-516
               

               
Cow position:
               
chr18:51368776-51368393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
134-519
               

               
Cow position:
               
chr18:55067116-55066731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 155
               

               
Conread position:
               
134-520
               

               
Cow position:
               
chr18:14453294-14452908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
135-409
               

               
Cow position:
               
chr18:43053464-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
136-519
               

               
Cow position:
               
chr18:43094163-43093783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
109, 53
               

               
Conread position:
               
137-516
               

               
Cow position:
               
chr18:50250839-50251208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
229, 58
               

               
Conread position:
               
137-525
               

               
Cow position:
               
chr18:56248239-56247859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
138-520
               

               
Cow position:
               
chr18:42827402-42827784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
140-519
               

               
Cow position:
               
chr18:42724840-42724461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
162, 139
               

               
Conread position:
               
144-518
               

               
Cow position:
               
chr18:56315969-56316343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
148-519
               

               
Cow position:
               
chr18:55497699-55497327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
5, 135
               

               
Conread position:
               
149-519
               

               
Cow position:
               
chr18:41197501-41197870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
151-510
               

               
Cow position:
               
chr18:55523319-55523678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
291, 284
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr18:40323790-40323453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
156-525
               

               
Cow position:
               
chr18:53636112-53635743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
158-524
               

               
Cow position:
               
chr18:53559692-53560058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
167-516
               

               
Cow position:
               
chr18:54966894-54967243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
214, 210
               

               
Conread position:
               
168-517
               

               
Cow position:
               
chr18:50098919-50099268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
180-518
               

               
Cow position:
               
chr18:50281630-50281968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
195-519
               

               
Cow position:
               
chr18:44239728-44240052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
251, 241
               

               
Conread position:
               
195-520
               

               
Cow position:
               
chr18:44154483-44154155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 175
               

               
Conread position:
               
195-520
               

               
Cow position:
               
chr18:44184915-44184590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
168, 172
               

               
Conread position:
               
196-523
               

               
Cow position:
               
chr18:42837964-42837637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-518
               

               
Cow position:
               
chr18:56267481-56267166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
305, 296
               

               
Conread position:
               
206-525
               

               
Cow position:
               
chr18:56330205-56329886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
222-516
               

               
Cow position:
               
chr18:51971302-51971591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
225, 14
               

               
Conread position:
               
233-519
               

               
Cow position:
               
chr18:41197500-41197786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-518
               

               
Cow position:
               
chr18:50295216-50295482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
276-530
               

               
Cow position:
               
chr18:14453321-14453066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
9, 175
               

               
Conread position:
               
281-516
               

               
Cow position:
               
chr18:42985587-42985352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-529
               

               
Cow position:
               
chr18:44184913-44184665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
169, 158
               

               
Conread position:
               
282-530
               

               
Cow position:
               
chr18:42744740-42744495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
286-516
               

               
Cow position:
               
chr18:22634536-22634764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
289-518
               

               
Cow position:
               
chr18:43023090-43022861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
290-515
               

               
Cow position:
               
chr18:40087403-40087178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
103, 113
               

               
Conread position:
               
290-520
               

               
Cow position:
               
chr18:40074921-40075151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 83
               

               
Conread position:
               
401-520
               

               
Cow position:
               
chr18:41197500-41197619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.